Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10978
(350 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P42766 Cluster: 60S ribosomal protein L35; n=81; Eukary... 120 5e-27
UniRef50_P34662 Cluster: 60S ribosomal protein L35; n=33; Eukary... 107 7e-23
UniRef50_Q4WT53 Cluster: 60S ribosomal protein L35; n=5; cellula... 101 3e-21
UniRef50_Q4PGL7 Cluster: Putative uncharacterized protein; n=1; ... 92 2e-18
UniRef50_Q5CJ48 Cluster: 60S ribosomal protein L35; n=2; Cryptos... 83 2e-15
UniRef50_Q4UIF8 Cluster: 60S ribosomal protein L35; n=6; Alveola... 81 5e-15
UniRef50_Q9U935 Cluster: Ag15 protein; n=7; Alveolata|Rep: Ag15 ... 76 1e-13
UniRef50_A0DBI8 Cluster: Chromosome undetermined scaffold_44, wh... 71 7e-12
UniRef50_Q4Q8V7 Cluster: 60S ribosomal protein L35, putative; n=... 62 3e-09
UniRef50_Q0D991 Cluster: Os06g0732000 protein; n=9; Oryza sativa... 57 7e-08
UniRef50_Q7QRA8 Cluster: GLP_2_9191_9649; n=2; Giardia intestina... 56 1e-07
UniRef50_UPI00002376D7 Cluster: PREDICTED: similar to 60S riboso... 48 3e-05
UniRef50_Q019M2 Cluster: DNAJ_NEIMB Chaperone protein dnaJ sp|P6... 44 5e-04
UniRef50_UPI0000EBD742 Cluster: PREDICTED: similar to 60S riboso... 44 7e-04
UniRef50_A2E6R2 Cluster: Ribosomal protein L29, putative; n=4; T... 44 7e-04
UniRef50_Q2KL02 Cluster: 60S ribosomal protein L35; n=1; Siniper... 39 0.027
UniRef50_P22665 Cluster: 50S ribosomal protein L29P; n=4; Haloba... 38 0.036
UniRef50_Q7SHZ4 Cluster: Putative uncharacterized protein NCU006... 36 0.14
UniRef50_Q9UXG6 Cluster: Putative uncharacterized protein ORF-c4... 36 0.14
UniRef50_UPI00015BC6E3 Cluster: UPI00015BC6E3 related cluster; n... 36 0.19
UniRef50_P58084 Cluster: 50S ribosomal protein L29P; n=4; Thermo... 36 0.19
UniRef50_Q92QG2 Cluster: 50S ribosomal protein L29; n=16; Alphap... 35 0.33
UniRef50_Q3HVN4 Cluster: Putative uncharacterized protein; n=1; ... 35 0.44
UniRef50_Q7R2N3 Cluster: GLP_546_28386_29423; n=1; Giardia lambl... 34 0.58
UniRef50_A3Y5F4 Cluster: Putative uncharacterized protein; n=1; ... 34 0.77
UniRef50_Q6LXE6 Cluster: 50S ribosomal protein L29P; n=4; Methan... 34 0.77
UniRef50_Q81VS2 Cluster: 50S ribosomal protein L29; n=15; Firmic... 34 0.77
UniRef50_Q5HDW6 Cluster: 50S ribosomal protein L29; n=24; Bacter... 33 1.3
UniRef50_P56613 Cluster: 50S ribosomal protein L29; n=1; Aquifex... 33 1.3
UniRef50_Q7RK88 Cluster: Putative uncharacterized protein PY0301... 33 1.8
UniRef50_A2BMC6 Cluster: 50S ribosomal protein L29; n=2; Desulfu... 33 1.8
UniRef50_P66167 Cluster: 50S ribosomal protein L29; n=23; Bacter... 33 1.8
UniRef50_Q5FTZ1 Cluster: 50S ribosomal protein L29; n=1; Glucono... 33 1.8
UniRef50_UPI00006CAB30 Cluster: EF hand family protein; n=1; Tet... 32 2.4
UniRef50_A5FGD8 Cluster: Phage integrase family protein; n=1; Fl... 32 2.4
UniRef50_Q7Q6F7 Cluster: ENSANGP00000004512; n=2; Diptera|Rep: E... 32 2.4
UniRef50_Q8PV43 Cluster: 50S ribosomal protein L29P; n=9; Euryar... 32 2.4
UniRef50_P32333 Cluster: TATA-binding protein-associated factor ... 32 2.4
UniRef50_A7PQ24 Cluster: Chromosome chr18 scaffold_24, whole gen... 32 3.1
UniRef50_A0D1A4 Cluster: Chromosome undetermined scaffold_34, wh... 32 3.1
UniRef50_Q9PQQ2 Cluster: 50S ribosomal protein L29; n=1; Ureapla... 32 3.1
UniRef50_A0EI89 Cluster: Chromosome undetermined scaffold_98, wh... 31 4.1
UniRef50_Q8NEH6 Cluster: Meiosis-specific nuclear structural pro... 31 4.1
UniRef50_UPI00006CC8BD Cluster: Ubiquitin carboxyl-terminal hydr... 31 5.4
UniRef50_Q18AP3 Cluster: Exonuclease subunit C; n=2; Clostridium... 31 5.4
UniRef50_Q4Z2R9 Cluster: Putative uncharacterized protein; n=3; ... 31 5.4
UniRef50_Q23891 Cluster: ORF1740; n=1; Dictyostelium discoideum|... 31 5.4
UniRef50_A2F1U1 Cluster: Putative uncharacterized protein; n=1; ... 31 5.4
UniRef50_Q97N10 Cluster: Distantly related to cell wall-associat... 31 7.2
UniRef50_A2F5A5 Cluster: Putative uncharacterized protein; n=2; ... 31 7.2
UniRef50_UPI00006CAEC5 Cluster: PRP38 family protein; n=1; Tetra... 30 9.5
UniRef50_A0CPX7 Cluster: Chromosome undetermined scaffold_230, w... 30 9.5
UniRef50_Q8RIG3 Cluster: 50S ribosomal protein L29; n=4; Bacteri... 30 9.5
UniRef50_O28361 Cluster: 50S ribosomal protein L29P; n=1; Archae... 30 9.5
>UniRef50_P42766 Cluster: 60S ribosomal protein L35; n=81;
Eukaryota|Rep: 60S ribosomal protein L35 - Homo sapiens
(Human)
Length = 123
Score = 120 bits (290), Expect = 5e-27
Identities = 59/91 (64%), Positives = 70/91 (76%)
Frame = +3
Query: 3 QIEELKTELTNLRVAKVTGGVASKLSKIRVVRKAIARVYIVYHQKMKVNLRNHYKNKKYK 182
Q+++LK EL+ LRVAKVTGG ASKLSKIRVVRK+IARV V +Q K NLR YK KKYK
Sbjct: 20 QLDDLKVELSQLRVAKVTGGAASKLSKIRVVRKSIARVLTVINQTQKENLRKFYKGKKYK 79
Query: 183 PLDLRAKETRAMRKALTKHEAKIKRGKRSER 275
PLDLR K+TRAMR+ L KHE +K K+ +
Sbjct: 80 PLDLRPKKTRAMRRRLNKHEENLKTKKQQRK 110
>UniRef50_P34662 Cluster: 60S ribosomal protein L35; n=33;
Eukaryota|Rep: 60S ribosomal protein L35 -
Caenorhabditis elegans
Length = 123
Score = 107 bits (256), Expect = 7e-23
Identities = 52/103 (50%), Positives = 71/103 (68%)
Frame = +3
Query: 3 QIEELKTELTNLRVAKVTGGVASKLSKIRVVRKAIARVYIVYHQKMKVNLRNHYKNKKYK 182
+++E KTEL LRV+KVTGG ASKLSKIRVVRK IAR+ V +Q K LR Y + KYK
Sbjct: 20 KLDEQKTELATLRVSKVTGGAASKLSKIRVVRKNIARLLTVINQTQKQELRKFYADHKYK 79
Query: 183 PLDLRAKETRAMRKALTKHEAKIKRGKRSERNLSSHLESMPLK 311
P+DLR K+TRA+R+ LT HE ++ K+ ++ + + +K
Sbjct: 80 PIDLRLKKTRAIRRRLTAHELSLRSAKQQAKSRNQAVRKFAVK 122
>UniRef50_Q4WT53 Cluster: 60S ribosomal protein L35; n=5; cellular
organisms|Rep: 60S ribosomal protein L35 - Aspergillus
fumigatus (Sartorya fumigata)
Length = 203
Score = 101 bits (243), Expect = 3e-21
Identities = 49/93 (52%), Positives = 65/93 (69%)
Frame = +3
Query: 3 QIEELKTELTNLRVAKVTGGVASKLSKIRVVRKAIARVYIVYHQKMKVNLRNHYKNKKYK 182
Q+EELKTEL+ LRV K+ G +SK +I VRK+IARV V + + LR YKNKKY
Sbjct: 83 QLEELKTELSQLRVQKIAAGASSKTQRIHDVRKSIARVLTVINANQRAQLRLFYKNKKYT 142
Query: 183 PLDLRAKETRAMRKALTKHEAKIKRGKRSERNL 281
PLDLR + TRA+R+ LTKHEA +K K+ ++ +
Sbjct: 143 PLDLRPRLTRALRRRLTKHEATLKTEKQRKKEI 175
>UniRef50_Q4PGL7 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 218
Score = 92.3 bits (219), Expect = 2e-18
Identities = 46/78 (58%), Positives = 57/78 (73%)
Frame = +3
Query: 3 QIEELKTELTNLRVAKVTGGVASKLSKIRVVRKAIARVYIVYHQKMKVNLRNHYKNKKYK 182
Q+EELKTEL NLRV KV GG +SK+ +I +RK IARV V +QK + NLR YK K
Sbjct: 93 QLEELKTELLNLRVQKVAGGSSSKILRINSLRKDIARVLTVMNQKQRANLREFYKGKSQI 152
Query: 183 PLDLRAKETRAMRKALTK 236
PLDLRAK+TRA+R+ L +
Sbjct: 153 PLDLRAKKTRAIRRKLNQ 170
>UniRef50_Q5CJ48 Cluster: 60S ribosomal protein L35; n=2;
Cryptosporidium|Rep: 60S ribosomal protein L35 -
Cryptosporidium hominis
Length = 126
Score = 82.6 bits (195), Expect = 2e-15
Identities = 44/94 (46%), Positives = 61/94 (64%)
Frame = +3
Query: 3 QIEELKTELTNLRVAKVTGGVASKLSKIRVVRKAIARVYIVYHQKMKVNLRNHYKNKKYK 182
+I+ELK EL +LRV + TG +KLS+I VVRK IAR+ + Q+ +LR + K+
Sbjct: 23 KIDELKKELASLRVIQSTGTAPNKLSRINVVRKGIARILTILSQRNIKSLREKHAGSKFM 82
Query: 183 PLDLRAKETRAMRKALTKHEAKIKRGKRSERNLS 284
PLDLR K TRA R+ALT +AK K S++ L+
Sbjct: 83 PLDLRKKLTRAKRRALTPQQAKKMTVKASKKALN 116
>UniRef50_Q4UIF8 Cluster: 60S ribosomal protein L35; n=6;
Alveolata|Rep: 60S ribosomal protein L35 - Theileria
annulata
Length = 142
Score = 81.0 bits (191), Expect = 5e-15
Identities = 43/90 (47%), Positives = 56/90 (62%)
Frame = +3
Query: 6 IEELKTELTNLRVAKVTGGVASKLSKIRVVRKAIARVYIVYHQKMKVNLRNHYKNKKYKP 185
+++LK EL RV+KVT SKLSKI +VRKA+A+V VY+Q+ K R YK P
Sbjct: 40 LDDLKQELATFRVSKVTATGTSKLSKITLVRKAVAKVLTVYNQRKKEEARKKYKKLSKTP 99
Query: 186 LDLRAKETRAMRKALTKHEAKIKRGKRSER 275
L+LR K TRA RK LT + +K K +R
Sbjct: 100 LNLRPKLTRAKRKGLTTKQLTMKTIKERKR 129
>UniRef50_Q9U935 Cluster: Ag15 protein; n=7; Alveolata|Rep: Ag15
protein - Plasmodium falciparum
Length = 124
Score = 76.2 bits (179), Expect = 1e-13
Identities = 44/94 (46%), Positives = 60/94 (63%), Gaps = 2/94 (2%)
Frame = +3
Query: 3 QIEELKTELTNLRVAKVTGGVASKLSKIRVVRKAIARVYIVYHQKMKVNLRNHYKNKKYK 182
+++ELK EL+ LR++K G A K SKI VRK +ARV VY+QK K+ LR YKNKK+K
Sbjct: 20 KLDELKKELSGLRISKALGNSA-KNSKIHGVRKNVARVLTVYNQKRKMELRQLYKNKKFK 78
Query: 183 PLDLRAKETRAMRKALTKHE--AKIKRGKRSERN 278
P +LR K T+ R L+ + A R K+ +N
Sbjct: 79 PYNLRKKLTKNKRLQLSPKQKAAMTLRQKKKVQN 112
>UniRef50_A0DBI8 Cluster: Chromosome undetermined scaffold_44, whole
genome shotgun sequence; n=9; Oligohymenophorea|Rep:
Chromosome undetermined scaffold_44, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 125
Score = 70.5 bits (165), Expect = 7e-12
Identities = 39/102 (38%), Positives = 62/102 (60%)
Frame = +3
Query: 6 IEELKTELTNLRVAKVTGGVASKLSKIRVVRKAIARVYIVYHQKMKVNLRNHYKNKKYKP 185
+E+LK EL LR KV+ G A KL +I +VRK IA+ V +++ + +++N K+ P
Sbjct: 23 LEKLKGELIQLRTVKVSAGNAQKLGRIGLVRKRIAKFLTVINEQRRNSVKNAAKSSTKLP 82
Query: 186 LDLRAKETRAMRKALTKHEAKIKRGKRSERNLSSHLESMPLK 311
+DLR K+TRA+R+ LT+ E K ++ +R + L LK
Sbjct: 83 VDLRGKKTRAIRQRLTRSERAQKTQRQWKRLNNFPLRKFALK 124
>UniRef50_Q4Q8V7 Cluster: 60S ribosomal protein L35, putative; n=5;
Trypanosomatidae|Rep: 60S ribosomal protein L35,
putative - Leishmania major
Length = 127
Score = 61.7 bits (143), Expect = 3e-09
Identities = 34/90 (37%), Positives = 53/90 (58%), Gaps = 3/90 (3%)
Frame = +3
Query: 6 IEELKTELTNLRVAKVTGGVASKLSKIRVVRKAIARVYIVYHQKMKVNLRNHYKNKKYK- 182
+ E K EL+ LRV + TGG ++L +IR +RK+IAR+ V +Q + NL+ Y ++K +
Sbjct: 22 LTEYKKELSQLRVVQQTGGAETRLGRIRPIRKSIARILTVLNQNERSNLKMFYADRKLRC 81
Query: 183 --PLDLRAKETRAMRKALTKHEAKIKRGKR 266
P LR K T R AL ++E K ++
Sbjct: 82 KTPKVLRTKLTHRRRLALKENEKNRKTSRQ 111
>UniRef50_Q0D991 Cluster: Os06g0732000 protein; n=9; Oryza
sativa|Rep: Os06g0732000 protein - Oryza sativa subsp.
japonica (Rice)
Length = 290
Score = 57.2 bits (132), Expect = 7e-08
Identities = 36/83 (43%), Positives = 49/83 (59%)
Frame = +3
Query: 3 QIEELKTELTNLRVAKVTGGVASKLSKIRVVRKAIARVYIVYHQKMKVNLRNHYKNKKYK 182
Q+++LK EL+ LRVA+VTGG +KLS I+ VR A+ Y K K
Sbjct: 127 QLKDLKAELSVLRVARVTGGAPNKLSNIK-VRTALREAY-------------KKKKKSLL 172
Query: 183 PLDLRAKETRAMRKALTKHEAKI 251
PLDLR K+T A+R+ LTKH+ +
Sbjct: 173 PLDLRPKKTCAIRRRLTKHQGML 195
>UniRef50_Q7QRA8 Cluster: GLP_2_9191_9649; n=2; Giardia
intestinalis|Rep: GLP_2_9191_9649 - Giardia lamblia ATCC
50803
Length = 152
Score = 56.4 bits (130), Expect = 1e-07
Identities = 31/94 (32%), Positives = 53/94 (56%), Gaps = 1/94 (1%)
Frame = +3
Query: 3 QIEELKTELTNLRVAKVTGG-VASKLSKIRVVRKAIARVYIVYHQKMKVNLRNHYKNKKY 179
++ +LK EL +LR K T G V ++++ RV +K +ARV V +QK + R ++ ++
Sbjct: 48 KLADLKRELLSLRTMKATAGPVPERIARFRVCKKDVARVLTVINQKARDEARAAFEGAEH 107
Query: 180 KPLDLRAKETRAMRKALTKHEAKIKRGKRSERNL 281
P R + T AMR LT+ + ++ K +R L
Sbjct: 108 IPKTFRPRLTHAMRCQLTEKQKRLLPSKLMKRKL 141
>UniRef50_UPI00002376D7 Cluster: PREDICTED: similar to 60S ribosomal
protein L35; n=1; Homo sapiens|Rep: PREDICTED: similar
to 60S ribosomal protein L35 - Homo sapiens
Length = 106
Score = 48.4 bits (110), Expect = 3e-05
Identities = 25/47 (53%), Positives = 33/47 (70%), Gaps = 2/47 (4%)
Frame = +3
Query: 141 KVNLRNHYKNKKYKPLDLRAKETRAMRKALTKHEAK--IKRGKRSER 275
K NL YK KKYK L LR K+TRA+R+ L+KHE IK+ ++SE+
Sbjct: 43 KENLGKFYKGKKYKHLHLRPKKTRAVRRPLSKHEENLTIKKQQQSEQ 89
>UniRef50_Q019M2 Cluster: DNAJ_NEIMB Chaperone protein dnaJ
sp|P63968|DNAJ_NEIMA Chaperone protein dnaJ
gb|AAF40528.1| dna; n=2; Ostreococcus|Rep: DNAJ_NEIMB
Chaperone protein dnaJ sp|P63968|DNAJ_NEIMA Chaperone
protein dnaJ gb|AAF40528.1| dna - Ostreococcus tauri
Length = 575
Score = 44.4 bits (100), Expect = 5e-04
Identities = 34/85 (40%), Positives = 39/85 (45%), Gaps = 2/85 (2%)
Frame = -2
Query: 256 RLIFA--SCLVRALRIARVSLALKSKGXXXXXXXXXXXXXXXFW*YTM*TRAIAFLTTRI 83
R +FA S LV+A R+ARV KS G W T+ AIA T I
Sbjct: 411 RAVFAPFSDLVKARRMARVFFLRKSSGWYFAPSYADRKDANCLWRITVRVCAIANRTCLI 470
Query: 82 LDSFEATPPVTLATRRFVNSVFSSS 8
L S PPVTLATR +S F S
Sbjct: 471 LLSLPGAPPVTLATRSAASSDFKPS 495
>UniRef50_UPI0000EBD742 Cluster: PREDICTED: similar to 60S ribosomal
protein L35; n=1; Bos taurus|Rep: PREDICTED: similar to
60S ribosomal protein L35 - Bos taurus
Length = 98
Score = 44.0 bits (99), Expect = 7e-04
Identities = 31/83 (37%), Positives = 40/83 (48%)
Frame = +3
Query: 15 LKTELTNLRVAKVTGGVASKLSKIRVVRKAIARVYIVYHQKMKVNLRNHYKNKKYKPLDL 194
LK L L + K+T V+SK SKI V K I+R+ V +Q K NLR KYKPL
Sbjct: 10 LKVALPRLGIIKMTSSVSSKPSKILGVCKFISRLLTVVNQTQKENLR------KYKPLQS 63
Query: 195 RAKETRAMRKALTKHEAKIKRGK 263
+ T E +I G+
Sbjct: 64 KKAHTAGSTSMRRVEEQEIAAGE 86
>UniRef50_A2E6R2 Cluster: Ribosomal protein L29, putative; n=4;
Trichomonas vaginalis G3|Rep: Ribosomal protein L29,
putative - Trichomonas vaginalis G3
Length = 124
Score = 44.0 bits (99), Expect = 7e-04
Identities = 24/92 (26%), Positives = 45/92 (48%)
Frame = +3
Query: 3 QIEELKTELTNLRVAKVTGGVASKLSKIRVVRKAIARVYIVYHQKMKVNLRNHYKNKKYK 182
++ L+ +L L+ K A+KL++I+ R+ +ARV + + L+ Y K
Sbjct: 20 ELAGLEKKLFELKGQKAASAAATKLTEIKNTRRDVARVKSILMVSQRKALQEKYAKAKLV 79
Query: 183 PLDLRAKETRAMRKALTKHEAKIKRGKRSERN 278
P+DLR + +++R L A + S R+
Sbjct: 80 PIDLRKHQEKSLRNKLAPKYANKLTAQESRRH 111
>UniRef50_Q2KL02 Cluster: 60S ribosomal protein L35; n=1; Siniperca
chuatsi|Rep: 60S ribosomal protein L35 - Siniperca
chuatsi (Chinese perch)
Length = 57
Score = 38.7 bits (86), Expect = 0.027
Identities = 16/31 (51%), Positives = 22/31 (70%)
Frame = +3
Query: 180 KPLDLRAKETRAMRKALTKHEAKIKRGKRSE 272
KPLDLR K+TR +R+ L KHE ++ K +E
Sbjct: 1 KPLDLRPKKTRVLRRRLNKHEESLRTKKTAE 31
>UniRef50_P22665 Cluster: 50S ribosomal protein L29P; n=4;
Halobacteriaceae|Rep: 50S ribosomal protein L29P -
Halobacterium salinarium (Halobacterium halobium)
Length = 71
Score = 38.3 bits (85), Expect = 0.036
Identities = 17/45 (37%), Positives = 26/45 (57%)
Frame = +3
Query: 3 QIEELKTELTNLRVAKVTGGVASKLSKIRVVRKAIARVYIVYHQK 137
++EEL+TEL N + K GG +I +RK IAR+ V ++
Sbjct: 20 ELEELRTELLNSKAVKAAGGAPDNPGRISELRKTIARIKTVQREE 64
>UniRef50_Q7SHZ4 Cluster: Putative uncharacterized protein NCU00658.1;
n=1; Neurospora crassa|Rep: Putative uncharacterized
protein NCU00658.1 - Neurospora crassa
Length = 4007
Score = 36.3 bits (80), Expect = 0.14
Identities = 33/108 (30%), Positives = 55/108 (50%), Gaps = 9/108 (8%)
Frame = +3
Query: 3 QIEELKTELTNLRVAKVTGGVASKLSKIRVVRKAIARVYIVYHQ----KMKVNLRNHYKN 170
+++EL+ +L + VAKVT LS++R + V V+HQ K+ +N
Sbjct: 1290 KVDELQAKLKS-EVAKVTADYEGNLSELRTKHQGEVNVLKVHHQDEIKKLTAGHNEKIRN 1348
Query: 171 KKYKPLDLRA--KETRA---MRKALTKHEAKIKRGKRSERNLSSHLES 299
+++ DL+A K+ RA +KAL + E +GK ++ SS L S
Sbjct: 1349 LEHRINDLKAELKQDRAEFDKKKALLEGEVATLQGKVDDK--SSKLSS 1394
>UniRef50_Q9UXG6 Cluster: Putative uncharacterized protein
ORF-c40_015; n=1; Sulfolobus solfataricus|Rep: Putative
uncharacterized protein ORF-c40_015 - Sulfolobus
solfataricus
Length = 360
Score = 36.3 bits (80), Expect = 0.14
Identities = 28/94 (29%), Positives = 46/94 (48%), Gaps = 2/94 (2%)
Frame = +3
Query: 18 KTELTNLRVAKVTGGVASKLSKIRVVRKAIARVYIVYHQKMKVNLRNHYKNKKYKPLDLR 197
K LT + T G+ S L K ++ IV+ QK+K +L +Y+NK +
Sbjct: 171 KERLTVIDTDGWTVGLNSMLHKFELIYTIDPDYIIVFDQKIKDSLPENYRNKAILLKSVN 230
Query: 198 AKETRAMRKA--LTKHEAKIKRGKRSERNLSSHL 293
++R+ RKA + K+E K K + + LS +L
Sbjct: 231 LHKSRSERKANRIAKYERYFKEAK-NIKTLSENL 263
>UniRef50_UPI00015BC6E3 Cluster: UPI00015BC6E3 related cluster; n=1;
unknown|Rep: UPI00015BC6E3 UniRef100 entry - unknown
Length = 66
Score = 35.9 bits (79), Expect = 0.19
Identities = 19/47 (40%), Positives = 31/47 (65%)
Frame = +3
Query: 3 QIEELKTELTNLRVAKVTGGVASKLSKIRVVRKAIARVYIVYHQKMK 143
+++ELKTEL LR+ K G+ + SKIR ++ IAR+ V ++K +
Sbjct: 17 KLKELKTELFKLRITKKIEGL-KEPSKIRDTKRDIARILTVINEKRR 62
>UniRef50_P58084 Cluster: 50S ribosomal protein L29P; n=4;
Thermoprotei|Rep: 50S ribosomal protein L29P -
Sulfolobus solfataricus
Length = 73
Score = 35.9 bits (79), Expect = 0.19
Identities = 24/57 (42%), Positives = 32/57 (56%)
Frame = +3
Query: 3 QIEELKTELTNLRVAKVTGGVASKLSKIRVVRKAIARVYIVYHQKMKVNLRNHYKNK 173
+++ELK EL LRV G + + S IR RK IAR+ V +K KV R +NK
Sbjct: 19 KLDELKLELIKLRVQSRMGTLKNTAS-IRNTRKDIARILTVLSEKKKVK-REKVENK 73
>UniRef50_Q92QG2 Cluster: 50S ribosomal protein L29; n=16;
Alphaproteobacteria|Rep: 50S ribosomal protein L29 -
Rhizobium meliloti (Sinorhizobium meliloti)
Length = 66
Score = 35.1 bits (77), Expect = 0.33
Identities = 20/45 (44%), Positives = 27/45 (60%)
Frame = +3
Query: 3 QIEELKTELTNLRVAKVTGGVASKLSKIRVVRKAIARVYIVYHQK 137
++ +LK E NLR K TG + K S+I VRK IAR+ + QK
Sbjct: 17 ELAKLKKEQFNLRFQKATGQL-EKSSRINEVRKDIARIKTIARQK 60
>UniRef50_Q3HVN4 Cluster: Putative uncharacterized protein; n=1;
Solanum tuberosum|Rep: Putative uncharacterized protein
- Solanum tuberosum (Potato)
Length = 93
Score = 34.7 bits (76), Expect = 0.44
Identities = 19/35 (54%), Positives = 25/35 (71%)
Frame = +3
Query: 3 QIEELKTELTNLRVAKVTGGVASKLSKIRVVRKAI 107
Q+++LK EL LRV KVT G +KLSKI+V K +
Sbjct: 20 QLKDLKAELGLLRVVKVT-GAPNKLSKIKVHGKVV 53
>UniRef50_Q7R2N3 Cluster: GLP_546_28386_29423; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_546_28386_29423 - Giardia lamblia
ATCC 50803
Length = 345
Score = 34.3 bits (75), Expect = 0.58
Identities = 30/94 (31%), Positives = 41/94 (43%)
Frame = +3
Query: 9 EELKTELTNLRVAKVTGGVASKLSKIRVVRKAIARVYIVYHQKMKVNLRNHYKNKKYKPL 188
E LK + L+ K T + SKL I RVY Q +K++ + K KK
Sbjct: 156 ESLKKDKEALKERKDTEDI-SKLEFAEAKGGVIERVYCDVTQPLKIDKKKEAKEKK---- 210
Query: 189 DLRAKETRAMRKALTKHEAKIKRGKRSERNLSSH 290
L AKE R KAL++ K + S+ N H
Sbjct: 211 -LAAKENREAPKALSEGPLKADIKRISKENNGDH 243
>UniRef50_A3Y5F4 Cluster: Putative uncharacterized protein; n=1;
Marinomonas sp. MED121|Rep: Putative uncharacterized
protein - Marinomonas sp. MED121
Length = 1028
Score = 33.9 bits (74), Expect = 0.77
Identities = 20/75 (26%), Positives = 44/75 (58%), Gaps = 9/75 (12%)
Frame = +3
Query: 120 IVYHQKMKVNLRNHY-----KNKKYKP-LDLRA---KETRAMRKALTKHEAKIKRGKRSE 272
+++H ++ + L +HY K+K ++ +DL A +ET+A+++ L +H + + +
Sbjct: 215 VLHHARLSLMLGDHYYSSQDKDKNWQSSIDLYANTNRETKALKQKLDEHLVNVAQTATTT 274
Query: 273 RNLSSHLESMPLKLE 317
+L + ES PLK++
Sbjct: 275 ASLLPYFESNPLKVK 289
>UniRef50_Q6LXE6 Cluster: 50S ribosomal protein L29P; n=4;
Methanococcus|Rep: 50S ribosomal protein L29P -
Methanococcus maripaludis
Length = 71
Score = 33.9 bits (74), Expect = 0.77
Identities = 18/45 (40%), Positives = 24/45 (53%)
Frame = +3
Query: 3 QIEELKTELTNLRVAKVTGGVASKLSKIRVVRKAIARVYIVYHQK 137
+I ELK EL V K TGG S KI ++ IAR+ + +K
Sbjct: 20 KIAELKRELMKEGVNKSTGGAPSNPGKISETKRTIARILTIMKEK 64
>UniRef50_Q81VS2 Cluster: 50S ribosomal protein L29; n=15;
Firmicutes|Rep: 50S ribosomal protein L29 - Bacillus
anthracis
Length = 66
Score = 33.9 bits (74), Expect = 0.77
Identities = 19/45 (42%), Positives = 29/45 (64%)
Frame = +3
Query: 3 QIEELKTELTNLRVAKVTGGVASKLSKIRVVRKAIARVYIVYHQK 137
+++ LK EL NLR TG + + ++IR VRKAIAR+ V ++
Sbjct: 17 KVKALKEELFNLRFQLATGQLENP-TRIREVRKAIARMKTVVRER 60
>UniRef50_Q5HDW6 Cluster: 50S ribosomal protein L29; n=24;
Bacteria|Rep: 50S ribosomal protein L29 - Staphylococcus
aureus (strain COL)
Length = 69
Score = 33.1 bits (72), Expect = 1.3
Identities = 19/45 (42%), Positives = 27/45 (60%)
Frame = +3
Query: 3 QIEELKTELTNLRVAKVTGGVASKLSKIRVVRKAIARVYIVYHQK 137
QI+ K EL NLR TG + + ++IR VRK IAR+ V ++
Sbjct: 17 QIKSSKEELFNLRFQLATGQL-EETARIRTVRKTIARLKTVARER 60
>UniRef50_P56613 Cluster: 50S ribosomal protein L29; n=1; Aquifex
aeolicus|Rep: 50S ribosomal protein L29 - Aquifex
aeolicus
Length = 73
Score = 33.1 bits (72), Expect = 1.3
Identities = 18/44 (40%), Positives = 28/44 (63%)
Frame = +3
Query: 6 IEELKTELTNLRVAKVTGGVASKLSKIRVVRKAIARVYIVYHQK 137
++ELK ELT LR K G+ + + ++R V++ IARV V +K
Sbjct: 25 LDELKLELTRLRFKKQVQGLENPM-EMRKVKRNIARVLTVIREK 67
>UniRef50_Q7RK88 Cluster: Putative uncharacterized protein PY03013;
n=8; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein PY03013 - Plasmodium yoelii yoelii
Length = 2232
Score = 32.7 bits (71), Expect = 1.8
Identities = 21/75 (28%), Positives = 33/75 (44%), Gaps = 2/75 (2%)
Frame = +3
Query: 93 VRKAIARVYIVYHQKMKVNLRNHYKNKKYKPLDLRAKETRAMRKALTKHEAK--IKRGKR 266
+ K I ++ + K KV L + K KK+K K R ++ + K IK+GK
Sbjct: 352 LEKKILKITKMEMDKYKVKLNDKRKEKKFKNKSQTYKHERVKKRIYSSSPKKEIIKKGKS 411
Query: 267 SERNLSSHLESMPLK 311
E H+ S+ K
Sbjct: 412 EEIRSKKHINSVKHK 426
>UniRef50_A2BMC6 Cluster: 50S ribosomal protein L29; n=2;
Desulfurococcales|Rep: 50S ribosomal protein L29 -
Hyperthermus butylicus (strain DSM 5456 / JCM 9403)
Length = 77
Score = 32.7 bits (71), Expect = 1.8
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = +3
Query: 3 QIEELKTELTNLRVAKVTGGVASKLSKIRVVRKAIARVYIVYHQK 137
+++ELK EL LR+ K G IR +RK IAR+ V ++
Sbjct: 22 KLQELKEELVKLRL-KAAVGTLENPGAIRAIRKTIARILTVMREE 65
>UniRef50_P66167 Cluster: 50S ribosomal protein L29; n=23;
Bacteria|Rep: 50S ribosomal protein L29 - Listeria
innocua
Length = 63
Score = 32.7 bits (71), Expect = 1.8
Identities = 19/45 (42%), Positives = 28/45 (62%)
Frame = +3
Query: 3 QIEELKTELTNLRVAKVTGGVASKLSKIRVVRKAIARVYIVYHQK 137
Q + LK EL NLR TG + + ++IR VRKAIAR+ + ++
Sbjct: 17 QEKALKEELFNLRFQLATGQLENT-ARIREVRKAIARMKTIVRER 60
>UniRef50_Q5FTZ1 Cluster: 50S ribosomal protein L29; n=1;
Gluconobacter oxydans|Rep: 50S ribosomal protein L29 -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 77
Score = 32.7 bits (71), Expect = 1.8
Identities = 16/41 (39%), Positives = 26/41 (63%)
Frame = +3
Query: 12 ELKTELTNLRVAKVTGGVASKLSKIRVVRKAIARVYIVYHQ 134
+LK E N R + TG + S+++VVR+A+AR+ + HQ
Sbjct: 24 DLKREQINHRFSAATGQ-SENTSRVKVVRRAVARIKTLAHQ 63
>UniRef50_UPI00006CAB30 Cluster: EF hand family protein; n=1;
Tetrahymena thermophila SB210|Rep: EF hand family
protein - Tetrahymena thermophila SB210
Length = 566
Score = 32.3 bits (70), Expect = 2.4
Identities = 19/70 (27%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Frame = +3
Query: 93 VRKA--IARVYIVYHQKMKVNLRNHYKNKKYKPLDLRAKETRAMRKALTKHEAKIKRGKR 266
V+KA I + + +H+ NL+ H++N + P + ++ +L K E K +
Sbjct: 461 VKKAVDILKENLHFHENQLENLKKHFRNAQNNPTEKERRQITTEENSLYKPETKTTQQNS 520
Query: 267 SERNLSSHLE 296
E N HLE
Sbjct: 521 KENN---HLE 527
>UniRef50_A5FGD8 Cluster: Phage integrase family protein; n=1;
Flavobacterium johnsoniae UW101|Rep: Phage integrase
family protein - Flavobacterium johnsoniae UW101
Length = 386
Score = 32.3 bits (70), Expect = 2.4
Identities = 19/46 (41%), Positives = 25/46 (54%), Gaps = 5/46 (10%)
Frame = +3
Query: 126 YHQKMKVNLRNHYKNKKYKPLDLRA-----KETRAMRKALTKHEAK 248
YH K+K L+N YK +K + D+ A KE + R LT EAK
Sbjct: 178 YHNKLKTTLKNAYKEQKLR-TDINAGIDSIKEQESQRNFLTLKEAK 222
>UniRef50_Q7Q6F7 Cluster: ENSANGP00000004512; n=2; Diptera|Rep:
ENSANGP00000004512 - Anopheles gambiae str. PEST
Length = 1179
Score = 32.3 bits (70), Expect = 2.4
Identities = 17/45 (37%), Positives = 26/45 (57%)
Frame = +3
Query: 132 QKMKVNLRNHYKNKKYKPLDLRAKETRAMRKALTKHEAKIKRGKR 266
+K K L N K + DL+ K RA+ K T++E K+K+GK+
Sbjct: 1135 KKFKKELVNEKFKKLQRQKDLKKKVFRAISKMDTQNEEKMKKGKK 1179
>UniRef50_Q8PV43 Cluster: 50S ribosomal protein L29P; n=9;
Euryarchaeota|Rep: 50S ribosomal protein L29P -
Methanosarcina mazei (Methanosarcina frisia)
Length = 67
Score = 32.3 bits (70), Expect = 2.4
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +3
Query: 3 QIEELKTELTNLRVAKVTGGVASKLSKIRVVRKAIARVYIVYHQ 134
++E LK EL R GG +I +R+ IAR+ + H+
Sbjct: 20 ELENLKNELVRERALTSAGGAPDNPGRIGEIRRTIARIKTIQHE 63
>UniRef50_P32333 Cluster: TATA-binding protein-associated factor MOT1;
n=6; Fungi/Metazoa group|Rep: TATA-binding
protein-associated factor MOT1 - Saccharomyces cerevisiae
(Baker's yeast)
Length = 1867
Score = 32.3 bits (70), Expect = 2.4
Identities = 24/70 (34%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Frame = +3
Query: 111 RVYIVYHQKMKVNLRNHYKNKKYKPLDLRAKETRAMRKALTKHEAKIKRGKRSERNLSSH 290
+VY Y+ KM ++ N YK KPL+ +K M K AK++ G SS
Sbjct: 864 KVYGEYYDKMFKSMNNSYKLLAKKPLE-DSKHRVLMAINSAKESAKLRTGSILANYASSI 922
Query: 291 L--ESMPLKL 314
L + +PLKL
Sbjct: 923 LLFDGLPLKL 932
>UniRef50_A7PQ24 Cluster: Chromosome chr18 scaffold_24, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr18 scaffold_24, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 1724
Score = 31.9 bits (69), Expect = 3.1
Identities = 20/62 (32%), Positives = 33/62 (53%)
Frame = +3
Query: 24 ELTNLRVAKVTGGVASKLSKIRVVRKAIARVYIVYHQKMKVNLRNHYKNKKYKPLDLRAK 203
+LT LR+ ++G SKL K + + R+Y V+ + RN++ + YK LD +
Sbjct: 807 KLTLLRILTLSG--CSKLGKFQQNSGNLDRLYAVFLSFRGEDTRNNFTSHLYKALDQKGI 864
Query: 204 ET 209
ET
Sbjct: 865 ET 866
>UniRef50_A0D1A4 Cluster: Chromosome undetermined scaffold_34, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_34,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 485
Score = 31.9 bits (69), Expect = 3.1
Identities = 16/52 (30%), Positives = 28/52 (53%)
Frame = +3
Query: 111 RVYIVYHQKMKVNLRNHYKNKKYKPLDLRAKETRAMRKALTKHEAKIKRGKR 266
R Y++ +Q + + L N YKN+K +R+ + +K K KIK+ K+
Sbjct: 280 RNYLIQNQIIILQLSNSYKNRKLSKKKIRSLKKSKKKKFKLKSILKIKKRKK 331
>UniRef50_Q9PQQ2 Cluster: 50S ribosomal protein L29; n=1; Ureaplasma
parvum|Rep: 50S ribosomal protein L29 - Ureaplasma
parvum (Ureaplasma urealyticum biotype 1)
Length = 75
Score = 31.9 bits (69), Expect = 3.1
Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +3
Query: 12 ELKTELTNLRVAKVTGGVASKLSKIRVVRKAIARVYIVYHQK-MKVNLRNHYKNK 173
ELK +L LR A G A KL + +RK IAR + +++ + L N NK
Sbjct: 22 ELKAKLLELRFA-AANGEAEKLHTAKEIRKTIARALTILNERELAEKLNNKEANK 75
>UniRef50_A0EI89 Cluster: Chromosome undetermined scaffold_98, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_98,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 837
Score = 31.5 bits (68), Expect = 4.1
Identities = 19/107 (17%), Positives = 55/107 (51%), Gaps = 2/107 (1%)
Frame = +3
Query: 3 QIEELKTELTNLRVAKVTGGVASKLSKIRVVRKAIARVYIVYHQKMKVNLRNHYKNKKYK 182
QI++L T++ N ++ + V ++++ + + Y++ ++++K+ L N+K
Sbjct: 396 QIDDLTTQM-NDKIELLQWDVTQQIAQTVLYNNKQLQKYLIINEELKIELNQRKTNEKSA 454
Query: 183 PLDL--RAKETRAMRKALTKHEAKIKRGKRSERNLSSHLESMPLKLE 317
DL + + ++L + A+I+ ++S+ L + ++ ++E
Sbjct: 455 QNDLEKEIENKNQLLESLNQLTAQIQELEKSQNLLENEIQKKQQQIE 501
>UniRef50_Q8NEH6 Cluster: Meiosis-specific nuclear structural
protein 1; n=20; Euteleostomi|Rep: Meiosis-specific
nuclear structural protein 1 - Homo sapiens (Human)
Length = 495
Score = 31.5 bits (68), Expect = 4.1
Identities = 24/80 (30%), Positives = 40/80 (50%), Gaps = 3/80 (3%)
Frame = +3
Query: 87 RVVRKAIARVYI--VYHQKMKVNLRNHYKNKKYKPLDLRAKETRAMRKALTKHEA-KIKR 257
RV RK R+ + M+ ++ +NK+ K L L+ +E AM A KHE+ K ++
Sbjct: 50 RVQRKQFLRLLQNEQFELDMEEAIQKAEENKRLKELQLKQEEKLAMELAKLKHESLKDEK 109
Query: 258 GKRSERNLSSHLESMPLKLE 317
++ R S L + KL+
Sbjct: 110 MRQQVRENSIELRELEKKLK 129
>UniRef50_UPI00006CC8BD Cluster: Ubiquitin carboxyl-terminal hydrolase
family protein; n=1; Tetrahymena thermophila SB210|Rep:
Ubiquitin carboxyl-terminal hydrolase family protein -
Tetrahymena thermophila SB210
Length = 1152
Score = 31.1 bits (67), Expect = 5.4
Identities = 20/87 (22%), Positives = 45/87 (51%), Gaps = 3/87 (3%)
Frame = +3
Query: 66 ASKLSKIRVVRKAIARVYIVYHQKMKVNLRNHYKNK-KYKPLDLRA--KETRAMRKALTK 236
A K I +++ I + + + ++++ HY N+ +++ ++L+ K + KA+TK
Sbjct: 988 AGKAPTINDLKREIIKHLKLEITEDEIDIAKHYINQFEWREINLKTIQKYKESQLKAITK 1047
Query: 237 HEAKIKRGKRSERNLSSHLESMPLKLE 317
+ K K+G S+ S+ +P + E
Sbjct: 1048 KKGKKKKGTASKSQTSNQQNQVPQESE 1074
>UniRef50_Q18AP3 Cluster: Exonuclease subunit C; n=2; Clostridium
difficile|Rep: Exonuclease subunit C - Clostridium
difficile (strain 630)
Length = 1175
Score = 31.1 bits (67), Expect = 5.4
Identities = 23/100 (23%), Positives = 44/100 (44%), Gaps = 2/100 (2%)
Frame = +3
Query: 3 QIEELK--TELTNLRVAKVTGGVASKLSKIRVVRKAIARVYIVYHQKMKVNLRNHYKNKK 176
++E++K +E V K V K+ K+ + + ++++ Y + N KN+K
Sbjct: 384 ELEKVKQVSESRKDAVTKSIKEVEGKIDKVNISAELKQKIFLAYEYEKDYNNVLEEKNQK 443
Query: 177 YKPLDLRAKETRAMRKALTKHEAKIKRGKRSERNLSSHLE 296
L+ KET + + + R+ NLS HL+
Sbjct: 444 LNKLEEILKETENINLKVRYIDKDKNDVNRNLENLSLHLD 483
>UniRef50_Q4Z2R9 Cluster: Putative uncharacterized protein; n=3;
Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein - Plasmodium berghei
Length = 819
Score = 31.1 bits (67), Expect = 5.4
Identities = 20/72 (27%), Positives = 35/72 (48%)
Frame = +3
Query: 33 NLRVAKVTGGVASKLSKIRVVRKAIARVYIVYHQKMKVNLRNHYKNKKYKPLDLRAKETR 212
N+RV + V SK +I ++ K + Y ++ K+ +N Y+N+K K + +T+
Sbjct: 559 NVRVYVLIKNVVSK-KQIDIMNKLEGEQKLRYKERKKIREQNLYRNEKIKDRNGNHLKTK 617
Query: 213 AMRKALTKHEAK 248
L HE K
Sbjct: 618 NEEYYLLPHEKK 629
>UniRef50_Q23891 Cluster: ORF1740; n=1; Dictyostelium discoideum|Rep:
ORF1740 - Dictyostelium discoideum (Slime mold)
Length = 1740
Score = 31.1 bits (67), Expect = 5.4
Identities = 19/62 (30%), Positives = 33/62 (53%)
Frame = +3
Query: 96 RKAIARVYIVYHQKMKVNLRNHYKNKKYKPLDLRAKETRAMRKALTKHEAKIKRGKRSER 275
RK + ++ +Y + +R +K +K PL L+ + T+ RK L KH K+G + E+
Sbjct: 1372 RKVLEKIRSIY----SIGVRKRFKYRK-TPLSLK-RSTKISRKILQKHRKAKKQGLKIEK 1425
Query: 276 NL 281
L
Sbjct: 1426 PL 1427
>UniRef50_A2F1U1 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 866
Score = 31.1 bits (67), Expect = 5.4
Identities = 18/58 (31%), Positives = 31/58 (53%)
Frame = +3
Query: 144 VNLRNHYKNKKYKPLDLRAKETRAMRKALTKHEAKIKRGKRSERNLSSHLESMPLKLE 317
+ L++ K K K + L ++ M+ L + EAK K+ + + NLSS +E + LE
Sbjct: 158 LKLKSLKKKMKKKIISLSESNSQ-MKDLLNEAEAKAKKEEEQKSNLSSEVEQLKASLE 214
>UniRef50_Q97N10 Cluster: Distantly related to cell wall-associated
hydrolases, similar to yycO Bacillus subtilis; n=2;
Clostridium acetobutylicum|Rep: Distantly related to
cell wall-associated hydrolases, similar to yycO
Bacillus subtilis - Clostridium acetobutylicum
Length = 233
Score = 30.7 bits (66), Expect = 7.2
Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Frame = +3
Query: 21 TELTNLRVAKVTGGVA-SKLSKIRVVRKAIARVYIVYHQKMKVNLRNHYKNKKYKPLDLR 197
T LTN++ VT G+ ++ + ++ + I Y + K K + N YKNK K
Sbjct: 19 TTLTNVKAYAVTNGMTGNERNVLKQYQSNIDNTYNSFGDKKKTKVVNDYKNKVKKAQRFI 78
Query: 198 AKET 209
+++T
Sbjct: 79 SRDT 82
>UniRef50_A2F5A5 Cluster: Putative uncharacterized protein; n=2;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 343
Score = 30.7 bits (66), Expect = 7.2
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = +2
Query: 59 WSCFKTVQDPCCKKSYRTCLHCVSPEDEGQS*KPLQKQE 175
W F V +R C + PEDEG +PL+K +
Sbjct: 296 WGIFFLVAPVTVYLGWRLCYALIQPEDEGSKNEPLEKND 334
>UniRef50_UPI00006CAEC5 Cluster: PRP38 family protein; n=1;
Tetrahymena thermophila SB210|Rep: PRP38 family protein -
Tetrahymena thermophila SB210
Length = 2835
Score = 30.3 bits (65), Expect = 9.5
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +3
Query: 153 RNHYKNKKYKPLDLRAKETRAMRKALTKHEAKIKRGKRSERN-LSSHLESM 302
R+H K+KK+K R++ R+ + K KR K E N S +ESM
Sbjct: 2644 RSHDKHKKHKKRSSRSRSRDRERERDRDRDRKHKRSKSKEENKAKSKIESM 2694
>UniRef50_A0CPX7 Cluster: Chromosome undetermined scaffold_230,
whole genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_230,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 3164
Score = 30.3 bits (65), Expect = 9.5
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +2
Query: 29 NKSSGC*SYWWSCFKTVQDPCCKKSYRTCLHCV-SPEDEGQS*KPLQKQEI 178
N S C +Y++ +P C K Y TC C S +E + PL K+E+
Sbjct: 777 NNSCSCPAYYYD---QPDNPICIKCYNTCYGCKGSKNNECTACNPLSKREL 824
>UniRef50_Q8RIG3 Cluster: 50S ribosomal protein L29; n=4;
Bacteria|Rep: 50S ribosomal protein L29 - Fusobacterium
nucleatum subsp. nucleatum
Length = 60
Score = 30.3 bits (65), Expect = 9.5
Identities = 15/43 (34%), Positives = 29/43 (67%)
Frame = +3
Query: 9 EELKTELTNLRVAKVTGGVASKLSKIRVVRKAIARVYIVYHQK 137
+ELK EL NL+ +++ G + +KIR +R+ IAR+ + +++
Sbjct: 19 KELKEELFNLKF-QLSLGQLTNTAKIREIRREIARINTILNER 60
>UniRef50_O28361 Cluster: 50S ribosomal protein L29P; n=1;
Archaeoglobus fulgidus|Rep: 50S ribosomal protein L29P -
Archaeoglobus fulgidus
Length = 68
Score = 30.3 bits (65), Expect = 9.5
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +3
Query: 3 QIEELKTELTNLRVAKVTGGVASKLSKIRVVRKAIARV 116
++ EL+ EL LR +GG +I ++RK IAR+
Sbjct: 20 KLRELELELLKLRTLVRSGGAVENPGRINLIRKDIARL 57
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 257,998,151
Number of Sequences: 1657284
Number of extensions: 3860321
Number of successful extensions: 13393
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 13046
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13380
length of database: 575,637,011
effective HSP length: 90
effective length of database: 426,481,451
effective search space used: 11088517726
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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