Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10978
(350 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U12465-1|AAA51648.1| 123|Homo sapiens ribosomal protein L35 pro... 120 1e-27
CR456877-1|CAG33158.1| 123|Homo sapiens RPL35 protein. 120 1e-27
BC094828-1|AAH94828.1| 123|Homo sapiens ribosomal protein L35 p... 120 1e-27
BC071915-1|AAH71915.1| 123|Homo sapiens ribosomal protein L35 p... 120 1e-27
BC010919-1|AAH10919.1| 123|Homo sapiens RPL35 protein protein. 120 1e-27
BC000348-1|AAH00348.1| 123|Homo sapiens ribosomal protein L35 p... 120 1e-27
AL354928-8|CAI39639.1| 123|Homo sapiens ribosomal protein L35 p... 120 1e-27
AL354928-7|CAI39638.1| 95|Homo sapiens ribosomal protein L35 p... 76 3e-14
AB046409-1|BAB21255.1| 33|Homo sapiens ribosomal protein L35 p... 53 3e-07
BC034991-1|AAH34991.1| 495|Homo sapiens meiosis-specific nuclea... 31 0.77
BC031046-1|AAH31046.1| 495|Homo sapiens meiosis-specific nuclea... 31 0.77
AK002084-1|BAA92077.1| 495|Homo sapiens protein ( Homo sapiens ... 31 0.77
AB076384-1|BAB82982.1| 376|Homo sapiens X box-binding protein s... 30 2.4
BC077732-1|AAH77732.1| 662|Homo sapiens FKBP15 protein protein. 29 3.1
BC107597-1|AAI07598.1| 417|Homo sapiens LOC130940 protein protein. 28 7.2
BC015395-1|AAH15395.1| 255|Homo sapiens LOC130940 protein protein. 28 7.2
AL449305-3|CAI10964.1| 1244|Homo sapiens FK506 binding protein 1... 28 7.2
AL449105-1|CAI95402.1| 1244|Homo sapiens FK506 binding protein 1... 28 7.2
AK058105-1|BAB71668.1| 255|Homo sapiens protein ( Homo sapiens ... 28 7.2
AF458588-1|AAM49716.1| 591|Homo sapiens unknown protein. 28 7.2
AC019044-1|AAX88983.1| 361|Homo sapiens unknown protein. 28 7.2
AB014574-1|BAA31649.1| 1234|Homo sapiens KIAA0674 protein protein. 28 7.2
BC049850-1|AAH49850.1| 800|Homo sapiens nucleolar complex assoc... 28 9.5
AL355341-1|CAD13194.1| 800|Homo sapiens AD24 protein protein. 28 9.5
AB077992-1|BAB84194.1| 800|Homo sapiens AD24 protein. 28 9.5
>U12465-1|AAA51648.1| 123|Homo sapiens ribosomal protein L35
protein.
Length = 123
Score = 120 bits (290), Expect = 1e-27
Identities = 59/91 (64%), Positives = 70/91 (76%)
Frame = +3
Query: 3 QIEELKTELTNLRVAKVTGGVASKLSKIRVVRKAIARVYIVYHQKMKVNLRNHYKNKKYK 182
Q+++LK EL+ LRVAKVTGG ASKLSKIRVVRK+IARV V +Q K NLR YK KKYK
Sbjct: 20 QLDDLKVELSQLRVAKVTGGAASKLSKIRVVRKSIARVLTVINQTQKENLRKFYKGKKYK 79
Query: 183 PLDLRAKETRAMRKALTKHEAKIKRGKRSER 275
PLDLR K+TRAMR+ L KHE +K K+ +
Sbjct: 80 PLDLRPKKTRAMRRRLNKHEENLKTKKQQRK 110
>CR456877-1|CAG33158.1| 123|Homo sapiens RPL35 protein.
Length = 123
Score = 120 bits (290), Expect = 1e-27
Identities = 59/91 (64%), Positives = 70/91 (76%)
Frame = +3
Query: 3 QIEELKTELTNLRVAKVTGGVASKLSKIRVVRKAIARVYIVYHQKMKVNLRNHYKNKKYK 182
Q+++LK EL+ LRVAKVTGG ASKLSKIRVVRK+IARV V +Q K NLR YK KKYK
Sbjct: 20 QLDDLKVELSQLRVAKVTGGAASKLSKIRVVRKSIARVLTVINQTQKENLRKFYKGKKYK 79
Query: 183 PLDLRAKETRAMRKALTKHEAKIKRGKRSER 275
PLDLR K+TRAMR+ L KHE +K K+ +
Sbjct: 80 PLDLRPKKTRAMRRRLNKHEENLKTKKQQRK 110
>BC094828-1|AAH94828.1| 123|Homo sapiens ribosomal protein L35
protein.
Length = 123
Score = 120 bits (290), Expect = 1e-27
Identities = 59/91 (64%), Positives = 70/91 (76%)
Frame = +3
Query: 3 QIEELKTELTNLRVAKVTGGVASKLSKIRVVRKAIARVYIVYHQKMKVNLRNHYKNKKYK 182
Q+++LK EL+ LRVAKVTGG ASKLSKIRVVRK+IARV V +Q K NLR YK KKYK
Sbjct: 20 QLDDLKVELSQLRVAKVTGGAASKLSKIRVVRKSIARVLTVINQTQKENLRKFYKGKKYK 79
Query: 183 PLDLRAKETRAMRKALTKHEAKIKRGKRSER 275
PLDLR K+TRAMR+ L KHE +K K+ +
Sbjct: 80 PLDLRPKKTRAMRRRLNKHEENLKTKKQQRK 110
>BC071915-1|AAH71915.1| 123|Homo sapiens ribosomal protein L35
protein.
Length = 123
Score = 120 bits (290), Expect = 1e-27
Identities = 59/91 (64%), Positives = 70/91 (76%)
Frame = +3
Query: 3 QIEELKTELTNLRVAKVTGGVASKLSKIRVVRKAIARVYIVYHQKMKVNLRNHYKNKKYK 182
Q+++LK EL+ LRVAKVTGG ASKLSKIRVVRK+IARV V +Q K NLR YK KKYK
Sbjct: 20 QLDDLKVELSQLRVAKVTGGAASKLSKIRVVRKSIARVLTVINQTQKENLRKFYKGKKYK 79
Query: 183 PLDLRAKETRAMRKALTKHEAKIKRGKRSER 275
PLDLR K+TRAMR+ L KHE +K K+ +
Sbjct: 80 PLDLRPKKTRAMRRRLNKHEENLKTKKQQRK 110
>BC010919-1|AAH10919.1| 123|Homo sapiens RPL35 protein protein.
Length = 123
Score = 120 bits (290), Expect = 1e-27
Identities = 59/91 (64%), Positives = 70/91 (76%)
Frame = +3
Query: 3 QIEELKTELTNLRVAKVTGGVASKLSKIRVVRKAIARVYIVYHQKMKVNLRNHYKNKKYK 182
Q+++LK EL+ LRVAKVTGG ASKLSKIRVVRK+IARV V +Q K NLR YK KKYK
Sbjct: 20 QLDDLKVELSQLRVAKVTGGAASKLSKIRVVRKSIARVLTVINQTQKENLRKFYKGKKYK 79
Query: 183 PLDLRAKETRAMRKALTKHEAKIKRGKRSER 275
PLDLR K+TRAMR+ L KHE +K K+ +
Sbjct: 80 PLDLRPKKTRAMRRRLNKHEENLKTKKQQRK 110
>BC000348-1|AAH00348.1| 123|Homo sapiens ribosomal protein L35
protein.
Length = 123
Score = 120 bits (290), Expect = 1e-27
Identities = 59/91 (64%), Positives = 70/91 (76%)
Frame = +3
Query: 3 QIEELKTELTNLRVAKVTGGVASKLSKIRVVRKAIARVYIVYHQKMKVNLRNHYKNKKYK 182
Q+++LK EL+ LRVAKVTGG ASKLSKIRVVRK+IARV V +Q K NLR YK KKYK
Sbjct: 20 QLDDLKVELSQLRVAKVTGGAASKLSKIRVVRKSIARVLTVINQTQKENLRKFYKGKKYK 79
Query: 183 PLDLRAKETRAMRKALTKHEAKIKRGKRSER 275
PLDLR K+TRAMR+ L KHE +K K+ +
Sbjct: 80 PLDLRPKKTRAMRRRLNKHEENLKTKKQQRK 110
>AL354928-8|CAI39639.1| 123|Homo sapiens ribosomal protein L35
protein.
Length = 123
Score = 120 bits (290), Expect = 1e-27
Identities = 59/91 (64%), Positives = 70/91 (76%)
Frame = +3
Query: 3 QIEELKTELTNLRVAKVTGGVASKLSKIRVVRKAIARVYIVYHQKMKVNLRNHYKNKKYK 182
Q+++LK EL+ LRVAKVTGG ASKLSKIRVVRK+IARV V +Q K NLR YK KKYK
Sbjct: 20 QLDDLKVELSQLRVAKVTGGAASKLSKIRVVRKSIARVLTVINQTQKENLRKFYKGKKYK 79
Query: 183 PLDLRAKETRAMRKALTKHEAKIKRGKRSER 275
PLDLR K+TRAMR+ L KHE +K K+ +
Sbjct: 80 PLDLRPKKTRAMRRRLNKHEENLKTKKQQRK 110
>AL354928-7|CAI39638.1| 95|Homo sapiens ribosomal protein L35
protein.
Length = 95
Score = 76.2 bits (179), Expect = 3e-14
Identities = 38/55 (69%), Positives = 44/55 (80%)
Frame = +3
Query: 3 QIEELKTELTNLRVAKVTGGVASKLSKIRVVRKAIARVYIVYHQKMKVNLRNHYK 167
Q+++LK EL+ LRVAKVTGG ASKLSKIRVVRK+IARV V +Q K NLR YK
Sbjct: 19 QLDDLKVELSQLRVAKVTGGAASKLSKIRVVRKSIARVLTVINQTQKENLRKFYK 73
>AB046409-1|BAB21255.1| 33|Homo sapiens ribosomal protein L35
protein.
Length = 33
Score = 52.8 bits (121), Expect = 3e-07
Identities = 27/33 (81%), Positives = 29/33 (87%)
Frame = +3
Query: 36 LRVAKVTGGVASKLSKIRVVRKAIARVYIVYHQ 134
LRVAKVTGG ASKLSKIRVVRK+IARV V +Q
Sbjct: 1 LRVAKVTGGAASKLSKIRVVRKSIARVLTVINQ 33
>BC034991-1|AAH34991.1| 495|Homo sapiens meiosis-specific nuclear
structural 1 protein.
Length = 495
Score = 31.5 bits (68), Expect = 0.77
Identities = 24/80 (30%), Positives = 40/80 (50%), Gaps = 3/80 (3%)
Frame = +3
Query: 87 RVVRKAIARVYI--VYHQKMKVNLRNHYKNKKYKPLDLRAKETRAMRKALTKHEA-KIKR 257
RV RK R+ + M+ ++ +NK+ K L L+ +E AM A KHE+ K ++
Sbjct: 50 RVQRKQFLRLLQNEQFELDMEEAIQKAEENKRLKELQLKQEEKLAMELAKLKHESLKDEK 109
Query: 258 GKRSERNLSSHLESMPLKLE 317
++ R S L + KL+
Sbjct: 110 MRQQVRENSIELRELEKKLK 129
>BC031046-1|AAH31046.1| 495|Homo sapiens meiosis-specific nuclear
structural 1 protein.
Length = 495
Score = 31.5 bits (68), Expect = 0.77
Identities = 24/80 (30%), Positives = 40/80 (50%), Gaps = 3/80 (3%)
Frame = +3
Query: 87 RVVRKAIARVYI--VYHQKMKVNLRNHYKNKKYKPLDLRAKETRAMRKALTKHEA-KIKR 257
RV RK R+ + M+ ++ +NK+ K L L+ +E AM A KHE+ K ++
Sbjct: 50 RVQRKQFLRLLQNEQFELDMEEAIQKAEENKRLKELQLKQEEKLAMELAKLKHESLKDEK 109
Query: 258 GKRSERNLSSHLESMPLKLE 317
++ R S L + KL+
Sbjct: 110 MRQQVRENSIELRELEKKLK 129
>AK002084-1|BAA92077.1| 495|Homo sapiens protein ( Homo sapiens
cDNA FLJ11222 fis, clone PLACE1008177. ).
Length = 495
Score = 31.5 bits (68), Expect = 0.77
Identities = 24/80 (30%), Positives = 40/80 (50%), Gaps = 3/80 (3%)
Frame = +3
Query: 87 RVVRKAIARVYI--VYHQKMKVNLRNHYKNKKYKPLDLRAKETRAMRKALTKHEA-KIKR 257
RV RK R+ + M+ ++ +NK+ K L L+ +E AM A KHE+ K ++
Sbjct: 50 RVQRKQFLRLLQNEQFELDMEEAIQKAEENKRLKELQLKQEEKLAMELAKLKHESLKDEK 109
Query: 258 GKRSERNLSSHLESMPLKLE 317
++ R S L + KL+
Sbjct: 110 MRQQVRENSIELRELEKKLK 129
>AB076384-1|BAB82982.1| 376|Homo sapiens X box-binding protein
spliced form protein.
Length = 376
Score = 29.9 bits (64), Expect = 2.4
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = -2
Query: 316 SSFNGIDSRWEERFLSDLFPRLI 248
SS G++ WE+ F ++LFP+LI
Sbjct: 352 SSLLGVNHSWEDTFANELFPQLI 374
>BC077732-1|AAH77732.1| 662|Homo sapiens FKBP15 protein protein.
Length = 662
Score = 29.5 bits (63), Expect = 3.1
Identities = 22/94 (23%), Positives = 42/94 (44%), Gaps = 2/94 (2%)
Frame = +3
Query: 24 ELTNLRVAKVTGGV--ASKLSKIRVVRKAIARVYIVYHQKMKVNLRNHYKNKKYKPLDLR 197
E +NL + K + A++ ++ +V + A V H ++K+ + + L
Sbjct: 60 EQSNLMMEKRNNSLQTATENTQAKVTEELAAATAQVSHLQLKMTAHQKKETELQMQLTES 119
Query: 198 AKETRAMRKALTKHEAKIKRGKRSERNLSSHLES 299
KET +R LTK +AK+ + + S +S
Sbjct: 120 LKETDLLRGQLTKVQAKLSELQETSEQAQSKFKS 153
>BC107597-1|AAI07598.1| 417|Homo sapiens LOC130940 protein protein.
Length = 417
Score = 28.3 bits (60), Expect = 7.2
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +3
Query: 147 NLRNHYKNKKYKPLDLRAKETRAMRKALTKHEAKIK 254
+++N +N KYKP+D + K L AK+K
Sbjct: 14 HMKNEMRNIKYKPVDYQQLRALTEAKKLASASAKLK 49
>BC015395-1|AAH15395.1| 255|Homo sapiens LOC130940 protein protein.
Length = 255
Score = 28.3 bits (60), Expect = 7.2
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +3
Query: 147 NLRNHYKNKKYKPLDLRAKETRAMRKALTKHEAKIK 254
+++N +N KYKP+D + K L AK+K
Sbjct: 14 HMKNEMRNIKYKPVDYQQLRALTEAKKLASASAKLK 49
>AL449305-3|CAI10964.1| 1244|Homo sapiens FK506 binding protein 15,
133kDa protein.
Length = 1244
Score = 28.3 bits (60), Expect = 7.2
Identities = 18/73 (24%), Positives = 31/73 (42%)
Frame = +3
Query: 81 KIRVVRKAIARVYIVYHQKMKVNLRNHYKNKKYKPLDLRAKETRAMRKALTKHEAKIKRG 260
K +V + A V H ++K+ + + L KET +R LTK +AK+
Sbjct: 663 KAKVTEELAAATAQVSHLQLKMTAHQKKETELQMQLTESLKETDLLRGQLTKVQAKLSEL 722
Query: 261 KRSERNLSSHLES 299
+ + S +S
Sbjct: 723 QETSEQAQSKFKS 735
>AL449105-1|CAI95402.1| 1244|Homo sapiens FK506 binding protein 15,
133kDa protein.
Length = 1244
Score = 28.3 bits (60), Expect = 7.2
Identities = 18/73 (24%), Positives = 31/73 (42%)
Frame = +3
Query: 81 KIRVVRKAIARVYIVYHQKMKVNLRNHYKNKKYKPLDLRAKETRAMRKALTKHEAKIKRG 260
K +V + A V H ++K+ + + L KET +R LTK +AK+
Sbjct: 663 KAKVTEELAAATAQVSHLQLKMTAHQKKETELQMQLTESLKETDLLRGQLTKVQAKLSEL 722
Query: 261 KRSERNLSSHLES 299
+ + S +S
Sbjct: 723 QETSEQAQSKFKS 735
>AK058105-1|BAB71668.1| 255|Homo sapiens protein ( Homo sapiens
cDNA FLJ25376 fis, clone TST02010. ).
Length = 255
Score = 28.3 bits (60), Expect = 7.2
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +3
Query: 147 NLRNHYKNKKYKPLDLRAKETRAMRKALTKHEAKIK 254
+++N +N KYKP+D + K L AK+K
Sbjct: 14 HMKNEMRNIKYKPVDYQQLRALTEAKKLASASAKLK 49
>AF458588-1|AAM49716.1| 591|Homo sapiens unknown protein.
Length = 591
Score = 28.3 bits (60), Expect = 7.2
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +3
Query: 147 NLRNHYKNKKYKPLDLRAKETRAMRKALTKHEAKIK 254
+++N +N KYKP+D + K L AK+K
Sbjct: 14 HMKNEMRNIKYKPVDYQQLRALTEAKKLASASAKLK 49
>AC019044-1|AAX88983.1| 361|Homo sapiens unknown protein.
Length = 361
Score = 28.3 bits (60), Expect = 7.2
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +3
Query: 147 NLRNHYKNKKYKPLDLRAKETRAMRKALTKHEAKIK 254
+++N +N KYKP+D + K L AK+K
Sbjct: 5 HMKNEMRNIKYKPVDYQQLRALTEAKKLASASAKLK 40
>AB014574-1|BAA31649.1| 1234|Homo sapiens KIAA0674 protein protein.
Length = 1234
Score = 28.3 bits (60), Expect = 7.2
Identities = 18/73 (24%), Positives = 31/73 (42%)
Frame = +3
Query: 81 KIRVVRKAIARVYIVYHQKMKVNLRNHYKNKKYKPLDLRAKETRAMRKALTKHEAKIKRG 260
K +V + A V H ++K+ + + L KET +R LTK +AK+
Sbjct: 653 KAKVTEELAAATAQVSHLQLKMTAHQKKETELQMQLTESLKETDLLRGQLTKVQAKLSEL 712
Query: 261 KRSERNLSSHLES 299
+ + S +S
Sbjct: 713 QETSEQAQSKFKS 725
>BC049850-1|AAH49850.1| 800|Homo sapiens nucleolar complex
associated 3 homolog (S. cerevisiae) protein.
Length = 800
Score = 27.9 bits (59), Expect = 9.5
Identities = 25/71 (35%), Positives = 33/71 (46%), Gaps = 13/71 (18%)
Frame = +3
Query: 141 KVNLRNHYKNKKYKP---LDLRAKETRAMRKALTK---------HEAKIKR-GKRSERNL 281
KV L N KNK++K L KE R +R+A+ K KR GKR ER
Sbjct: 21 KVKLENKLKNKQFKQQSTLKKYRKEQRKLRQAVKDAVSKKPIPLENPKEKRPGKRIEREE 80
Query: 282 SSHLESMPLKL 314
E++PL +
Sbjct: 81 EEEEEALPLDM 91
>AL355341-1|CAD13194.1| 800|Homo sapiens AD24 protein protein.
Length = 800
Score = 27.9 bits (59), Expect = 9.5
Identities = 25/71 (35%), Positives = 33/71 (46%), Gaps = 13/71 (18%)
Frame = +3
Query: 141 KVNLRNHYKNKKYKP---LDLRAKETRAMRKALTK---------HEAKIKR-GKRSERNL 281
KV L N KNK++K L KE R +R+A+ K KR GKR ER
Sbjct: 21 KVKLENKLKNKQFKQQSTLKKYRKEQRKLRQAVKDAVSKKPIPLENPKEKRPGKRIEREE 80
Query: 282 SSHLESMPLKL 314
E++PL +
Sbjct: 81 EEEEEALPLDM 91
>AB077992-1|BAB84194.1| 800|Homo sapiens AD24 protein.
Length = 800
Score = 27.9 bits (59), Expect = 9.5
Identities = 25/71 (35%), Positives = 33/71 (46%), Gaps = 13/71 (18%)
Frame = +3
Query: 141 KVNLRNHYKNKKYKP---LDLRAKETRAMRKALTK---------HEAKIKR-GKRSERNL 281
KV L N KNK++K L KE R +R+A+ K KR GKR ER
Sbjct: 21 KVKLENKLKNKQFKQQSTLKKYRKEQRKLRQAVKDAVSKKPIPLENPKEKRPGKRIEREE 80
Query: 282 SSHLESMPLKL 314
E++PL +
Sbjct: 81 EEEEEALPLDM 91
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,740,517
Number of Sequences: 237096
Number of extensions: 574397
Number of successful extensions: 1518
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1501
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1518
length of database: 76,859,062
effective HSP length: 80
effective length of database: 57,891,382
effective search space used: 2084089752
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -