Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10975
(634 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5TLD2 Cluster: Replication protein A middle subunit; n... 179 6e-44
UniRef50_UPI0000D56D09 Cluster: PREDICTED: similar to CG9273-PA;... 71 2e-11
UniRef50_A0ANL8 Cluster: CG9273 protein; n=6; melanogaster subgr... 70 4e-11
UniRef50_Q7XZT4 Cluster: RPA 32kDa; n=1; Pisum sativum|Rep: RPA ... 61 2e-08
UniRef50_Q9ZQ19 Cluster: Putative replication protein A1; n=1; A... 60 3e-08
UniRef50_Q16GV5 Cluster: Insect replication protein a; n=3; Dipt... 59 1e-07
UniRef50_Q9FY12 Cluster: Replication protein A2; n=5; Oryza sati... 58 1e-07
UniRef50_A1DNG3 Cluster: Possible replication factor-a protein; ... 51 2e-05
UniRef50_A7Q6E0 Cluster: Chromosome chr11 scaffold_56, whole gen... 51 3e-05
UniRef50_Q5DE14 Cluster: SJCHGC02904 protein; n=1; Schistosoma j... 50 4e-05
UniRef50_P15927 Cluster: Replication protein A 32 kDa subunit; n... 50 5e-05
UniRef50_Q4PBD4 Cluster: Putative uncharacterized protein; n=1; ... 48 1e-04
UniRef50_Q6BK90 Cluster: Debaryomyces hansenii chromosome F of s... 48 2e-04
UniRef50_A4RHQ3 Cluster: Putative uncharacterized protein; n=2; ... 48 2e-04
UniRef50_Q0D9X6 Cluster: Os06g0693300 protein; n=4; Oryza sativa... 47 3e-04
UniRef50_A6QUM8 Cluster: Predicted protein; n=2; Onygenales|Rep:... 45 0.001
UniRef50_A4S6E3 Cluster: Predicted protein; n=1; Ostreococcus lu... 45 0.002
UniRef50_Q55UB0 Cluster: Putative uncharacterized protein; n=2; ... 44 0.002
UniRef50_Q7S8S2 Cluster: Putative uncharacterized protein NCU077... 44 0.004
UniRef50_A3LYC8 Cluster: Predicted protein; n=1; Pichia stipitis... 42 0.012
UniRef50_Q13156 Cluster: Replication protein A 30 kDa subunit; n... 41 0.022
UniRef50_Q59Z33 Cluster: Putative uncharacterized protein RFA2; ... 40 0.066
UniRef50_UPI00015B54AA Cluster: PREDICTED: similar to Replicatio... 39 0.087
UniRef50_Q8IIN9 Cluster: Putative uncharacterized protein; n=3; ... 39 0.11
UniRef50_A2X7J6 Cluster: Putative uncharacterized protein; n=3; ... 38 0.15
UniRef50_UPI0000DB6B4E Cluster: PREDICTED: similar to CG9273-PA;... 37 0.35
UniRef50_Q00X67 Cluster: Single-stranded DNA-binding replication... 37 0.35
UniRef50_Q92373 Cluster: Replication factor-A protein 2; n=1; Sc... 37 0.35
UniRef50_UPI0000E4791B Cluster: PREDICTED: similar to replicatio... 36 0.61
UniRef50_UPI0000499C47 Cluster: hypothetical protein 276.t00004;... 33 4.3
UniRef50_Q7N7E0 Cluster: Similar to SyrP-like protein; n=1; Phot... 33 5.7
UniRef50_UPI0000D56B92 Cluster: PREDICTED: similar to CG32556-PA... 33 7.5
UniRef50_A4M7Y4 Cluster: Metal dependent phosphohydrolase; n=1; ... 32 10.0
UniRef50_A4F842 Cluster: Putative uncharacterized protein; n=1; ... 32 10.0
>UniRef50_Q5TLD2 Cluster: Replication protein A middle subunit; n=1;
Bombyx mori|Rep: Replication protein A middle subunit -
Bombyx mori (Silk moth)
Length = 259
Score = 179 bits (435), Expect = 6e-44
Identities = 83/94 (88%), Positives = 88/94 (93%)
Frame = +2
Query: 254 ESTKITYTIQDITGRMRAVLWLDQEAMEVEDTSSPKVQVNDYIQIYGNVKTNKGTKVLMA 433
+STKITYTIQDITGRMRAVLWLDQEAMEVEDTSSPKVQVNDYIQIYGNVKTNKGTKVLMA
Sbjct: 72 QSTKITYTIQDITGRMRAVLWLDQEAMEVEDTSSPKVQVNDYIQIYGNVKTNKGTKVLMA 131
Query: 434 FKIMPVTDVNIITCHYFQCIHNNIQWKLAQRRKK 535
FKIMPVTDVNIIT HYFQCIHN IQ + +++K
Sbjct: 132 FKIMPVTDVNIITFHYFQCIHNKIQMEAGSKKEK 165
Score = 126 bits (303), Expect = 6e-28
Identities = 56/56 (100%), Positives = 56/56 (100%)
Frame = +3
Query: 42 MWNDDPSGGGFLNTTNQFGNTATPKKTGRRAARTAPIVIRQALHSGEEGVKIWGTE 209
MWNDDPSGGGFLNTTNQFGNTATPKKTGRRAARTAPIVIRQALHSGEEGVKIWGTE
Sbjct: 1 MWNDDPSGGGFLNTTNQFGNTATPKKTGRRAARTAPIVIRQALHSGEEGVKIWGTE 56
Score = 84.2 bits (199), Expect = 2e-15
Identities = 40/42 (95%), Positives = 42/42 (100%)
Frame = +1
Query: 508 MEAGSKKEKDIQDVPISNMLPANSMVGITETSSVNGLNSRQM 633
MEAGSKKEK+IQDVPI+NMLPANSMVGITETSSVNGLNSRQM
Sbjct: 157 MEAGSKKEKNIQDVPINNMLPANSMVGITETSSVNGLNSRQM 198
>UniRef50_UPI0000D56D09 Cluster: PREDICTED: similar to CG9273-PA;
n=1; Tribolium castaneum|Rep: PREDICTED: similar to
CG9273-PA - Tribolium castaneum
Length = 254
Score = 70.9 bits (166), Expect = 2e-11
Identities = 31/80 (38%), Positives = 55/80 (68%)
Frame = +2
Query: 254 ESTKITYTIQDITGRMRAVLWLDQEAMEVEDTSSPKVQVNDYIQIYGNVKTNKGTKVLMA 433
++TK T TI+D + ++A++WL+ + V T+ P V+ N Y++++G+V+T G K++M
Sbjct: 75 QTTKATCTIEDHSASIKAIMWLETDNDTV--TALPPVKENCYVRVFGSVRTQDGEKMIMI 132
Query: 434 FKIMPVTDVNIITCHYFQCI 493
KI+PV D+NI+T H + I
Sbjct: 133 LKILPVDDLNIVTNHLLEII 152
>UniRef50_A0ANL8 Cluster: CG9273 protein; n=6; melanogaster
subgroup|Rep: CG9273 protein - Drosophila melanogaster
(Fruit fly)
Length = 246
Score = 70.1 bits (164), Expect = 4e-11
Identities = 31/80 (38%), Positives = 52/80 (65%)
Frame = +2
Query: 257 STKITYTIQDITGRMRAVLWLDQEAMEVEDTSSPKVQVNDYIQIYGNVKTNKGTKVLMAF 436
STKITYT++D +G + A WL+ E + +P+V VN+Y+++YG ++ G+K LM F
Sbjct: 66 STKITYTLEDHSGSIDAHYWLE----EGDALKAPEVMVNNYVKVYGTTRSQGGSKTLMIF 121
Query: 437 KIMPVTDVNIITCHYFQCIH 496
K++PV D N + H + ++
Sbjct: 122 KLLPVLDPNEVCTHLLEVLN 141
>UniRef50_Q7XZT4 Cluster: RPA 32kDa; n=1; Pisum sativum|Rep: RPA
32kDa - Pisum sativum (Garden pea)
Length = 273
Score = 61.3 bits (142), Expect = 2e-08
Identities = 28/89 (31%), Positives = 56/89 (62%), Gaps = 2/89 (2%)
Frame = +2
Query: 257 STKITYTIQDITGRMRAVLWLDQ--EAMEVEDTSSPKVQVNDYIQIYGNVKTNKGTKVLM 430
+T + + + D TGR++ W+++ ++ E+E+ S+ Y+++YGN+K+ +G K L
Sbjct: 83 NTDVNFVLDDGTGRIKCRRWVNETFDSKEMEEVSNDM-----YVRVYGNLKSFQGVKQLG 137
Query: 431 AFKIMPVTDVNIITCHYFQCIHNNIQWKL 517
AF + PVT+ + I H+ CIH+++ K+
Sbjct: 138 AFSVRPVTNFDEIPFHFIDCIHSHLLAKV 166
>UniRef50_Q9ZQ19 Cluster: Putative replication protein A1; n=1;
Arabidopsis thaliana|Rep: Putative replication protein
A1 - Arabidopsis thaliana (Mouse-ear cress)
Length = 279
Score = 60.5 bits (140), Expect = 3e-08
Identities = 29/91 (31%), Positives = 52/91 (57%)
Frame = +2
Query: 260 TKITYTIQDITGRMRAVLWLDQEAMEVEDTSSPKVQVNDYIQIYGNVKTNKGTKVLMAFK 439
T++ +T+ D TGR+ W+ E + + S V+ Y+++ G++KT +G L+ F
Sbjct: 88 TEVRFTLDDGTGRIDCKRWVS-ETFDAREMES--VRDGTYVRLSGHLKTFQGKTQLLVFS 144
Query: 440 IMPVTDVNIITCHYFQCIHNNIQWKLAQRRK 532
+ P+ D N +T HY +CIH Q +QR++
Sbjct: 145 VRPIMDFNEVTFHYIECIHFYSQNSESQRQQ 175
>UniRef50_Q16GV5 Cluster: Insect replication protein a; n=3;
Diptera|Rep: Insect replication protein a - Aedes
aegypti (Yellowfever mosquito)
Length = 247
Score = 58.8 bits (136), Expect = 1e-07
Identities = 28/82 (34%), Positives = 50/82 (60%)
Frame = +2
Query: 251 NESTKITYTIQDITGRMRAVLWLDQEAMEVEDTSSPKVQVNDYIQIYGNVKTNKGTKVLM 430
+ STKITY ++D TG++ A LWL+ E + S P + + Y +++G+V+ G+K +M
Sbjct: 65 HSSTKITYGLEDHTGQVDAHLWLE----EGDTNSVPGMMTHSYARVFGSVRHQGGSKAVM 120
Query: 431 AFKIMPVTDVNIITCHYFQCIH 496
+KI V+ N +T H + ++
Sbjct: 121 IYKIEQVSSPNDVTTHLLEVLN 142
>UniRef50_Q9FY12 Cluster: Replication protein A2; n=5; Oryza
sativa|Rep: Replication protein A2 - Oryza sativa (Rice)
Length = 279
Score = 58.4 bits (135), Expect = 1e-07
Identities = 28/84 (33%), Positives = 48/84 (57%)
Frame = +2
Query: 257 STKITYTIQDITGRMRAVLWLDQEAMEVEDTSSPKVQVNDYIQIYGNVKTNKGTKVLMAF 436
+T +++TI D TGR+ + W++ A E + VQ Y+ + G++K + K AF
Sbjct: 84 NTDVSFTIDDGTGRLDFIRWVNDGADSAETAA---VQNGMYVSVIGSLKGLQERKRATAF 140
Query: 437 KIMPVTDVNIITCHYFQCIHNNIQ 508
I PVTD N +T H+ QC+ +++
Sbjct: 141 AIRPVTDYNEVTLHFIQCVRMHLE 164
>UniRef50_A1DNG3 Cluster: Possible replication factor-a protein;
n=8; Trichocomaceae|Rep: Possible replication factor-a
protein - Neosartorya fischeri (strain ATCC 1020 / DSM
3700 / NRRL 181)(Aspergillus fischerianus (strain ATCC
1020 / DSM 3700 / NRRL 181))
Length = 338
Score = 51.2 bits (117), Expect = 2e-05
Identities = 24/86 (27%), Positives = 47/86 (54%), Gaps = 7/86 (8%)
Frame = +2
Query: 251 NESTKITYTIQDITGRMRAVLWLDQEA---MEVED----TSSPKVQVNDYIQIYGNVKTN 409
++ST +TY I D TG + W+D + ME +D T +V++N + +++G +K+
Sbjct: 141 SQSTNVTYKIDDGTGEIEVKQWIDTQTADTMETDDGKAGTGKNQVELNGFAKVFGKIKSF 200
Query: 410 KGTKVLMAFKIMPVTDVNIITCHYFQ 487
+ + A + P T++N + CH +
Sbjct: 201 GNKRYVGAHCVRPTTNLNEVHCHLLE 226
>UniRef50_A7Q6E0 Cluster: Chromosome chr11 scaffold_56, whole genome
shotgun sequence; n=5; core eudicotyledons|Rep:
Chromosome chr11 scaffold_56, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 277
Score = 50.8 bits (116), Expect = 3e-05
Identities = 25/82 (30%), Positives = 48/82 (58%)
Frame = +2
Query: 260 TKITYTIQDITGRMRAVLWLDQEAMEVEDTSSPKVQVNDYIQIYGNVKTNKGTKVLMAFK 439
T + + + D TGR+ W++ EA++ ++ + Y++++G++K +G + L F
Sbjct: 87 TDVGFMLDDGTGRIDCNRWVN-EAVDTKEMEG--ILDGMYVRVHGHLKGFQGKRHLNVFS 143
Query: 440 IMPVTDVNIITCHYFQCIHNNI 505
I PVTD N I H+ +CI+ +I
Sbjct: 144 IRPVTDFNEIASHFIECIYVHI 165
>UniRef50_Q5DE14 Cluster: SJCHGC02904 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC02904 protein - Schistosoma
japonicum (Blood fluke)
Length = 262
Score = 50.4 bits (115), Expect = 4e-05
Identities = 22/80 (27%), Positives = 45/80 (56%)
Frame = +2
Query: 257 STKITYTIQDITGRMRAVLWLDQEAMEVEDTSSPKVQVNDYIQIYGNVKTNKGTKVLMAF 436
ST++ Y I D TG V + ++ S + Y++++G+V+ +G K ++AF
Sbjct: 81 STRVEYEIDDYTGPYLPVKFFTEDQDSTSSIQSRPFRELSYVRVHGHVRNFQGVKHVIAF 140
Query: 437 KIMPVTDVNIITCHYFQCIH 496
+++ V+D+N +T H + I+
Sbjct: 141 RVIYVSDMNELTTHILEVIY 160
>UniRef50_P15927 Cluster: Replication protein A 32 kDa subunit;
n=32; Euteleostomi|Rep: Replication protein A 32 kDa
subunit - Homo sapiens (Human)
Length = 270
Score = 50.0 bits (114), Expect = 5e-05
Identities = 27/80 (33%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Frame = +2
Query: 260 TKITYTIQDITGR-MRAVLWLDQEAMEVEDTSSPKVQVNDYIQIYGNVKTNKGTKVLMAF 436
T I Y I D+T M W+D + E+T P Y+++ G++++ + K L+AF
Sbjct: 88 TNIVYKIDDMTAAPMDVRQWVDTDDTSSENTVVPP---ETYVKVAGHLRSFQNKKSLVAF 144
Query: 437 KIMPVTDVNIITCHYFQCIH 496
KIMP+ D+N T H + I+
Sbjct: 145 KIMPLEDMNEFTTHILEVIN 164
>UniRef50_Q4PBD4 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 285
Score = 48.4 bits (110), Expect = 1e-04
Identities = 19/84 (22%), Positives = 48/84 (57%)
Frame = +2
Query: 257 STKITYTIQDITGRMRAVLWLDQEAMEVEDTSSPKVQVNDYIQIYGNVKTNKGTKVLMAF 436
+T + Y+++D TG++ WLD + + + + +++ N Y+++ G +K+ + + + +
Sbjct: 91 ATNVAYSVEDGTGQIEVRQWLDSSS--DDSSKASEIRNNVYVRVLGTLKSFQNRRSISSG 148
Query: 437 KIMPVTDVNIITCHYFQCIHNNIQ 508
+ PV D N + H + +H ++Q
Sbjct: 149 HMRPVIDYNEVMFHRLEAVHAHLQ 172
>UniRef50_Q6BK90 Cluster: Debaryomyces hansenii chromosome F of
strain CBS767 of Debaryomyces hansenii; n=2;
Saccharomycetaceae|Rep: Debaryomyces hansenii chromosome
F of strain CBS767 of Debaryomyces hansenii -
Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
Length = 260
Score = 48.0 bits (109), Expect = 2e-04
Identities = 24/84 (28%), Positives = 45/84 (53%)
Frame = +2
Query: 257 STKITYTIQDITGRMRAVLWLDQEAMEVEDTSSPKVQVNDYIQIYGNVKTNKGTKVLMAF 436
++ I TI+D TG + W+D ++ +++ K ++N YI + G +K G K L
Sbjct: 84 TSAILITIEDGTGSIEVRKWID-DSNAMDENEQEKYEMNKYIYVTGALKEFNGKKNLQHA 142
Query: 437 KIMPVTDVNIITCHYFQCIHNNIQ 508
+ P+TD N I H+ I ++++
Sbjct: 143 TMRPITDHNEILYHHLSAISHHLK 166
>UniRef50_A4RHQ3 Cluster: Putative uncharacterized protein; n=2;
Sordariomycetes|Rep: Putative uncharacterized protein -
Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 290
Score = 47.6 bits (108), Expect = 2e-04
Identities = 24/78 (30%), Positives = 40/78 (51%)
Frame = +2
Query: 254 ESTKITYTIQDITGRMRAVLWLDQEAMEVEDTSSPKVQVNDYIQIYGNVKTNKGTKVLMA 433
+ T ITY I D TG + W+D E E D +S + Q + Y++++G +K + + A
Sbjct: 104 QPTNITYRIDDGTGTIDVKRWIDPEKAEDADAAS-QHQPDSYVRVWGKLKAFNNRRHVGA 162
Query: 434 FKIMPVTDVNIITCHYFQ 487
+ PV D N + H +
Sbjct: 163 LFVRPVEDFNEVNYHMLE 180
>UniRef50_Q0D9X6 Cluster: Os06g0693300 protein; n=4; Oryza
sativa|Rep: Os06g0693300 protein - Oryza sativa subsp.
japonica (Rice)
Length = 430
Score = 47.2 bits (107), Expect = 3e-04
Identities = 21/86 (24%), Positives = 47/86 (54%)
Frame = +2
Query: 251 NESTKITYTIQDITGRMRAVLWLDQEAMEVEDTSSPKVQVNDYIQIYGNVKTNKGTKVLM 430
+ T + +T+ D TG++ V W+ ++ + DTS +Q Y+++ N+ + K +
Sbjct: 97 SRDTDVCFTLDDSTGKIPLVRWITDQS-DTRDTS--YIQEGVYVKVQVNLMGFQAKKQGL 153
Query: 431 AFKIMPVTDVNIITCHYFQCIHNNIQ 508
A I P+ + N + H+ +C+H +++
Sbjct: 154 ARSIRPINNFNEVVLHFIECMHVHLE 179
>UniRef50_A6QUM8 Cluster: Predicted protein; n=2; Onygenales|Rep:
Predicted protein - Ajellomyces capsulatus NAm1
Length = 247
Score = 45.2 bits (102), Expect = 0.001
Identities = 22/87 (25%), Positives = 45/87 (51%), Gaps = 10/87 (11%)
Frame = +2
Query: 257 STKITYTIQDITGRMRAVLWLDQEA-------MEVED---TSSPKVQVNDYIQIYGNVKT 406
+T +TY + D TG + LWL++ A M+ D +S ++ +N Y +++G +
Sbjct: 72 TTFVTYKLDDGTGEIEVKLWLEKNAVNPTGDDMDTGDAPRSSESEIPINGYAKVWGKLNN 131
Query: 407 NKGTKVLMAFKIMPVTDVNIITCHYFQ 487
+ +A I P+T+++ CH+ +
Sbjct: 132 FNNRRNFVAHVIRPITNIDEYNCHFLE 158
>UniRef50_A4S6E3 Cluster: Predicted protein; n=1; Ostreococcus
lucimarinus CCE9901|Rep: Predicted protein -
Ostreococcus lucimarinus CCE9901
Length = 249
Score = 44.8 bits (101), Expect = 0.002
Identities = 23/85 (27%), Positives = 46/85 (54%), Gaps = 3/85 (3%)
Frame = +2
Query: 251 NESTKITYTIQDITGRMRAVLWLDQEAMEVEDTSSPKVQVNDYIQIYGNVKTNKGTKVLM 430
++S+ + Y + D TG +W DQ+ + T+ P ++V Y+++YG+VKT ++
Sbjct: 68 SKSSYVLYKVDDSTGVCDVKVWSDQDG---DQTAEP-IEVGAYVRVYGSVKTLANEHMIA 123
Query: 431 AF---KIMPVTDVNIITCHYFQCIH 496
A + +TD N +T H + ++
Sbjct: 124 AHTQQAVRKITDHNEVTFHMLEVVY 148
>UniRef50_Q55UB0 Cluster: Putative uncharacterized protein; n=2;
Filobasidiella neoformans|Rep: Putative uncharacterized
protein - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 266
Score = 44.4 bits (100), Expect = 0.002
Identities = 23/80 (28%), Positives = 43/80 (53%)
Frame = +2
Query: 257 STKITYTIQDITGRMRAVLWLDQEAMEVEDTSSPKVQVNDYIQIYGNVKTNKGTKVLMAF 436
+T I+Y I D TG + A +WLD + + E + ++ + Y+ + G +K G + + A
Sbjct: 85 ATNISYEIGDGTGYIDARVWLD--SADDESGKTTGIEQDHYVGLMGTIKVFGGKRHVSAT 142
Query: 437 KIMPVTDVNIITCHYFQCIH 496
I P+TD N + H + ++
Sbjct: 143 HIRPITDGNEVQHHLLKALY 162
>UniRef50_Q7S8S2 Cluster: Putative uncharacterized protein
NCU07717.1; n=2; Sordariomycetes|Rep: Putative
uncharacterized protein NCU07717.1 - Neurospora crassa
Length = 284
Score = 43.6 bits (98), Expect = 0.004
Identities = 23/83 (27%), Positives = 42/83 (50%), Gaps = 2/83 (2%)
Frame = +2
Query: 254 ESTKITYTIQDITGRMRAVLWLDQEAMEVED--TSSPKVQVNDYIQIYGNVKTNKGTKVL 427
+ T ITY I D TG + W+D EA ED + + + + +++++G +K+ G K +
Sbjct: 78 QPTNITYRIDDGTGAIDVKKWVDSEAQGGEDGGSGAGTIAPDAFVRVWGRLKSLGGKKHV 137
Query: 428 MAFKIMPVTDVNIITCHYFQCIH 496
A I + D N + H + +
Sbjct: 138 SANFIRQIEDFNEVNYHLLEATY 160
>UniRef50_A3LYC8 Cluster: Predicted protein; n=1; Pichia
stipitis|Rep: Predicted protein - Pichia stipitis
(Yeast)
Length = 247
Score = 41.9 bits (94), Expect = 0.012
Identities = 20/81 (24%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Frame = +2
Query: 266 ITYTIQDITGRMRAVLWLDQEA-MEVEDTSSPKVQVNDYIQIYGNVKTNKGTKVLMAFKI 442
I+ TI+D TG W+D+ + E ++ ++ Y+ + G +K+ + +
Sbjct: 77 ISVTIEDGTGTTNVRKWVDENSGTPAEAEEKYRMYLDKYVYVTGALKSMSNKSYIQNASV 136
Query: 443 MPVTDVNIITCHYFQCIHNNI 505
MPV D N + H IH+++
Sbjct: 137 MPVKDHNQVLSHVLSAIHHHL 157
>UniRef50_Q13156 Cluster: Replication protein A 30 kDa subunit; n=4;
Eutheria|Rep: Replication protein A 30 kDa subunit -
Homo sapiens (Human)
Length = 261
Score = 41.1 bits (92), Expect = 0.022
Identities = 27/91 (29%), Positives = 47/91 (51%), Gaps = 1/91 (1%)
Frame = +2
Query: 257 STKITYTIQDITGR-MRAVLWLDQEAMEVEDTSSPKVQVNDYIQIYGNVKTNKGTKVLMA 433
S I Y I D+T + + A W +E +V+ + V V Y++++G +K GTK L
Sbjct: 87 SNHICYKIDDMTAKPIEARQWFGRE--KVKQVTPLSVGV--YVKVFGILKCPTGTKSLEV 142
Query: 434 FKIMPVTDVNIITCHYFQCIHNNIQWKLAQR 526
KI + D+N T H + ++ ++ A+R
Sbjct: 143 LKIHVLEDMNEFTVHILETVNAHMMLDKARR 173
>UniRef50_Q59Z33 Cluster: Putative uncharacterized protein RFA2;
n=2; Saccharomycetales|Rep: Putative uncharacterized
protein RFA2 - Candida albicans (Yeast)
Length = 272
Score = 39.5 bits (88), Expect = 0.066
Identities = 22/87 (25%), Positives = 38/87 (43%), Gaps = 1/87 (1%)
Frame = +2
Query: 251 NESTKITYTIQDITGRMRAVLWLDQEAMEV-EDTSSPKVQVNDYIQIYGNVKTNKGTKVL 427
N + I TI+D TG + W+D+ ED Y+ + G++K K +
Sbjct: 83 NTNASIAVTIEDGTGSIDVRKWVDETISSAEEDFEKYNEMKGKYVYVGGSLKQFNNRKTV 142
Query: 428 MAFKIMPVTDVNIITCHYFQCIHNNIQ 508
I +TD N I H+ I ++++
Sbjct: 143 QNASISLITDSNQIVYHHLSAIEHHLK 169
>UniRef50_UPI00015B54AA Cluster: PREDICTED: similar to Replication
protein A middle subunit; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to Replication protein A middle
subunit - Nasonia vitripennis
Length = 253
Score = 39.1 bits (87), Expect = 0.087
Identities = 20/84 (23%), Positives = 43/84 (51%)
Frame = +2
Query: 257 STKITYTIQDITGRMRAVLWLDQEAMEVEDTSSPKVQVNDYIQIYGNVKTNKGTKVLMAF 436
STK+++ D TG + + WL+ ++ E SP V+VN Y +++G ++ ++
Sbjct: 77 STKVSFEFSDDTGNISGLKWLEGDSANYE---SP-VKVNSYARVHGMIRDQGEDHYVLIV 132
Query: 437 KIMPVTDVNIITCHYFQCIHNNIQ 508
I P+ + + H+ + ++Q
Sbjct: 133 NIQPMDHLMELLSHHMEVTLMSLQ 156
Score = 34.7 bits (76), Expect = 1.9
Identities = 21/66 (31%), Positives = 29/66 (43%)
Frame = +3
Query: 9 STNNFDLYFKTMWNDDPSGGGFLNTTNQFGNTATPKKTGRRAARTAPIVIRQALHSGEEG 188
S NNFD N GGF+NTT K +R P++I + GE+
Sbjct: 2 SWNNFD-------NSTAGEGGFMNTTVNDSTAGEDKANLKRGQNCVPVMIAHLVRYGEK- 53
Query: 189 VKIWGT 206
+ +WGT
Sbjct: 54 LTVWGT 59
>UniRef50_Q8IIN9 Cluster: Putative uncharacterized protein; n=3;
Plasmodium|Rep: Putative uncharacterized protein -
Plasmodium falciparum (isolate 3D7)
Length = 191
Score = 38.7 bits (86), Expect = 0.11
Identities = 25/94 (26%), Positives = 47/94 (50%), Gaps = 3/94 (3%)
Frame = +2
Query: 266 ITYTIQDITGRMRAVLWLDQEAMEVEDTSSPKVQVNDYIQIYG---NVKTNKGTKVLMAF 436
I YTI D TG ++A L L ++ + +++ND IQI+G V N+ + ++
Sbjct: 73 IIYTIDDTTGCIKAKLLLTY-SLNSYNEKKDNIKINDLIQIFGICNTVSLNEDLTISIS- 130
Query: 437 KIMPVTDVNIITCHYFQCIHNNIQWKLAQRRKKI 538
I + N + H+ H+ ++++ +RR I
Sbjct: 131 SINKLDSFNYLCHHHLLVFHDYLKYQEEERRNPI 164
>UniRef50_A2X7J6 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 320
Score = 38.3 bits (85), Expect = 0.15
Identities = 12/45 (26%), Positives = 29/45 (64%)
Frame = +2
Query: 374 DYIQIYGNVKTNKGTKVLMAFKIMPVTDVNIITCHYFQCIHNNIQ 508
DY+ + G +K +G + ++A+ + +T+ N +T H+ C+H +++
Sbjct: 160 DYVIVNGGLKGFQGKRQVVAYSVRRITNFNDVTHHFLHCVHVHLE 204
>UniRef50_UPI0000DB6B4E Cluster: PREDICTED: similar to CG9273-PA;
n=1; Apis mellifera|Rep: PREDICTED: similar to CG9273-PA
- Apis mellifera
Length = 223
Score = 37.1 bits (82), Expect = 0.35
Identities = 18/61 (29%), Positives = 33/61 (54%)
Frame = +2
Query: 257 STKITYTIQDITGRMRAVLWLDQEAMEVEDTSSPKVQVNDYIQIYGNVKTNKGTKVLMAF 436
+TKI+Y I+D TG + A+ WL+ E + + +VN Y++I G ++ + +
Sbjct: 75 ATKISYDIEDDTGTITALKWLEANKQETDRVA----EVNTYVRIVGMLREQNDKLIYASL 130
Query: 437 K 439
K
Sbjct: 131 K 131
>UniRef50_Q00X67 Cluster: Single-stranded DNA-binding replication
protein A (RPA), medium (30 kD) subunit; n=1;
Ostreococcus tauri|Rep: Single-stranded DNA-binding
replication protein A (RPA), medium (30 kD) subunit -
Ostreococcus tauri
Length = 262
Score = 37.1 bits (82), Expect = 0.35
Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 3/84 (3%)
Frame = +2
Query: 254 ESTKITYTIQDITGRMRAVLWLDQEAMEVEDTSSPKVQVNDYIQIYGNVKTNKGTKVLMA 433
+ +++ Y + D TG+ +WLD + VE+ + Y+++YG K +V+ A
Sbjct: 82 KGSQVVYRLDDSTGQTDVKVWLDSDG-PVEE-----IPRGAYVRVYGTPKAVGADQVIAA 135
Query: 434 F---KIMPVTDVNIITCHYFQCIH 496
I +TD N IT H + I+
Sbjct: 136 HTTESIRVITDFNEITYHLLEVIY 159
>UniRef50_Q92373 Cluster: Replication factor-A protein 2; n=1;
Schizosaccharomyces pombe|Rep: Replication factor-A
protein 2 - Schizosaccharomyces pombe (Fission yeast)
Length = 279
Score = 37.1 bits (82), Expect = 0.35
Identities = 20/80 (25%), Positives = 39/80 (48%)
Frame = +2
Query: 254 ESTKITYTIQDITGRMRAVLWLDQEAMEVEDTSSPKVQVNDYIQIYGNVKTNKGTKVLMA 433
++T TY I+D TG + W +A+ ++ + Y+++YGN+K G + +
Sbjct: 92 QTTNTTYQIEDGTGMIEVRHWEHIDALS-------ELATDTYVRVYGNIKIFSGKIYIAS 144
Query: 434 FKIMPVTDVNIITCHYFQCI 493
I + D N + H+ + I
Sbjct: 145 QYIRTIKDHNEVHFHFLEAI 164
>UniRef50_UPI0000E4791B Cluster: PREDICTED: similar to replication
protein A2, partial; n=3; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to replication
protein A2, partial - Strongylocentrotus purpuratus
Length = 163
Score = 36.3 bits (80), Expect = 0.61
Identities = 14/45 (31%), Positives = 28/45 (62%)
Frame = +2
Query: 371 NDYIQIYGNVKTNKGTKVLMAFKIMPVTDVNIITCHYFQCIHNNI 505
N YI++ GNV+ G + + F+I P+ D+N I+ H + + +++
Sbjct: 111 NTYIKVSGNVRAFGGKRSIGPFRIAPIKDLNEISMHMAEVVQSHM 155
>UniRef50_UPI0000499C47 Cluster: hypothetical protein 276.t00004;
n=1; Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
protein 276.t00004 - Entamoeba histolytica HM-1:IMSS
Length = 149
Score = 33.5 bits (73), Expect = 4.3
Identities = 21/75 (28%), Positives = 37/75 (49%)
Frame = +2
Query: 272 YTIQDITGRMRAVLWLDQEAMEVEDTSSPKVQVNDYIQIYGNVKTNKGTKVLMAFKIMPV 451
YTI D TG + V+ + Q D++ ++V YI+ G +K ++A ++ V
Sbjct: 76 YTINDSTGSV--VVGVYQI-----DSTEENIEVGQYIKCVGKIKKFSQETYILASRLPLV 128
Query: 452 TDVNIITCHYFQCIH 496
DVN + H +C +
Sbjct: 129 VDVNHMMTHLIECAY 143
>UniRef50_Q7N7E0 Cluster: Similar to SyrP-like protein; n=1;
Photorhabdus luminescens subsp. laumondii|Rep: Similar
to SyrP-like protein - Photorhabdus luminescens subsp.
laumondii
Length = 323
Score = 33.1 bits (72), Expect = 5.7
Identities = 17/58 (29%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Frame = +2
Query: 212 SNSVNSCKNQEH*NESTKIT-YTIQDITGRMRAVLWLDQEAMEVEDTSSPKVQVNDYI 382
SN+ N CK + + + + + I+D+ AVL E ++ E+ S+P+ +VND +
Sbjct: 20 SNNWNECKKKLNDHGALLFRGFNIEDVIAFREAVLSATPEILDYEEPSTPRTKVNDRV 77
>UniRef50_UPI0000D56B92 Cluster: PREDICTED: similar to CG32556-PA,
isoform A; n=1; Tribolium castaneum|Rep: PREDICTED:
similar to CG32556-PA, isoform A - Tribolium castaneum
Length = 1027
Score = 32.7 bits (71), Expect = 7.5
Identities = 20/71 (28%), Positives = 30/71 (42%), Gaps = 3/71 (4%)
Frame = +3
Query: 6 SSTNNFDLYFKTMWNDDPSGGGFLNTTNQFGNTATPKKTGR---RAARTAPIVIRQALHS 176
SST+ + Y T NDDP NT + P K GR + + ++ +
Sbjct: 937 SSTDYSETYHTTTRNDDPLRPSVTNTVKSYSKKTIPAKNGRSMETIESSETKSVTKSHYR 996
Query: 177 GEEGVKIWGTE 209
G+ VK + TE
Sbjct: 997 GDPSVKFYETE 1007
>UniRef50_A4M7Y4 Cluster: Metal dependent phosphohydrolase; n=1;
Petrotoga mobilis SJ95|Rep: Metal dependent
phosphohydrolase - Petrotoga mobilis SJ95
Length = 352
Score = 32.3 bits (70), Expect = 10.0
Identities = 19/60 (31%), Positives = 34/60 (56%)
Frame = +2
Query: 221 VNSCKNQEH*NESTKITYTIQDITGRMRAVLWLDQEAMEVEDTSSPKVQVNDYIQIYGNV 400
V S K Q+ N+ T + +TI D + +RA+ W + EA ++ K+Q+ D I++ G +
Sbjct: 43 VVSKKLQKTKNDKTFLLFTIADKSQSIRAIDWYNAEA------NNNKIQIGDVIKVKGKI 96
>UniRef50_A4F842 Cluster: Putative uncharacterized protein; n=1;
Saccharopolyspora erythraea NRRL 2338|Rep: Putative
uncharacterized protein - Saccharopolyspora erythraea
(strain NRRL 23338)
Length = 495
Score = 32.3 bits (70), Expect = 10.0
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = +2
Query: 251 NESTKITYTIQDITGRMRAVLWLDQEAMEVEDTSSPKVQVNDY 379
NE + + D+ GR+R+V WLD A+E D +S Q+ D+
Sbjct: 24 NERLETALGLDDVRGRLRSVGWLD--ALEDSDLTSALEQLRDW 64
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 620,595,645
Number of Sequences: 1657284
Number of extensions: 11992165
Number of successful extensions: 31528
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 30328
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31507
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 46881492319
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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