Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10971
         (445 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein ...   143   3e-36
CR954257-1|CAJ14152.1|  324|Anopheles gambiae putative dodecenoy...    23   6.4  
AY645021-1|AAT92557.1|  163|Anopheles gambiae even-skipped protein.    22   8.5  

>AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein L5
           protein.
          Length = 327

 Score =  143 bits (346), Expect = 3e-36
 Identities = 73/137 (53%), Positives = 89/137 (64%)
 Frame = +1

Query: 1   VDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMRSLEQDDEDSFKRQFSKY 180
           VDGGLN+PHS+KRFPGY AE+K FNAE+HR HIFGLHVA YMR+LE++DE++FKRQFSKY
Sbjct: 167 VDGGLNIPHSVKRFPGYSAENKSFNAEMHRDHIFGLHVANYMRTLEEEDEEAFKRQFSKY 226

Query: 181 IKLGVTADAIEAIYKKAHEAIRADXXXXXXXXXXXXXNRSAGTNAS*HWPRGKTESSKRR 360
           I LG+ AD IE IYK AH +IR                RS G      WP  ++  ++RR
Sbjct: 227 ISLGIKADDIENIYKNAHASIR--KIPPSRRNPRRRSPRSGG-----RWPSCRSPPARRR 279

Query: 361 LPSSRDCRLRRKLKCSK 411
             S+R     R    SK
Sbjct: 280 SRSTRPTSWPRSRPTSK 296


>CR954257-1|CAJ14152.1|  324|Anopheles gambiae putative
           dodecenoylCoA deltaisomerase protein.
          Length = 324

 Score = 22.6 bits (46), Expect = 6.4
 Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
 Frame = +2

Query: 296 EALEQTQANIGREEKQNQAKEGF-LHQETAGSGGSLNAL 409
           +ALE+  AN+  E  Q +AKEG    ++  G GGS + +
Sbjct: 268 QALEREAANVTVELLQ-EAKEGADKFRQGIGRGGSFSGI 305


>AY645021-1|AAT92557.1|  163|Anopheles gambiae even-skipped protein.
          Length = 163

 Score = 22.2 bits (45), Expect = 8.5
 Identities = 12/28 (42%), Positives = 14/28 (50%)
 Frame = -2

Query: 168 LSLERILIILFKTSHVFSNMQTKDVSPV 85
           LSL  + +  F TS   SN     VSPV
Sbjct: 88  LSLSPVSVSKFDTSASTSNSSNASVSPV 115


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 397,014
Number of Sequences: 2352
Number of extensions: 6821
Number of successful extensions: 10
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 37418568
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)