Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10968X
         (566 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    24   0.79 
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    23   2.4  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    22   4.2  
AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.         21   5.6  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    21   7.3  
AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.    21   9.7  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    21   9.7  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   9.7  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   9.7  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   9.7  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   9.7  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   9.7  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   9.7  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    21   9.7  
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    21   9.7  

>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 24.2 bits (50), Expect = 0.79
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = +1

Query: 124 PHGSTFRLGADSGRFSQCCSRPPCEQR 204
           P+G T   G D G +   CS  PCE +
Sbjct: 88  PYGYT---GKDCGEYVDWCSTNPCENQ 111


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 14/52 (26%), Positives = 25/52 (48%)
 Frame = +1

Query: 271 KDKFQVNLDVQHFAPEEISVKTADGYIVVEGKHEEKKDQHGYISRQFTRRYA 426
           KD ++   D++   P+   + +  G   V G+ EEK  ++  +    TRR A
Sbjct: 83  KDNYRKVTDLKKRFPKLKVLLSVGGNADVSGQDEEKNIKYRNLLETTTRRLA 134


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.8 bits (44), Expect = 4.2
 Identities = 9/28 (32%), Positives = 18/28 (64%)
 Frame = +3

Query: 96  LITKLSVLVASWINISAWG*LRKIFSVL 179
           ++  LSV+ +S+++I+ W  L K F  +
Sbjct: 484 VLNLLSVIKSSFLDINTWKMLVKSFDAI 511


>AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.
          Length = 247

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +2

Query: 494 SHPGRAASSGG*TQDFRSPKTGTP 565
           S   R  +S G  + F+S  TGTP
Sbjct: 128 SQSRRILASAGINKTFKSTLTGTP 151


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 10/35 (28%), Positives = 17/35 (48%)
 Frame = +3

Query: 339 GRLHRG*RQTRGEERSAWLHIASIHSSLRFAGGLY 443
           G  H G  ++     +AW  + S  S L  +GG++
Sbjct: 172 GATHHGGIKSDSVTSNAWWDVHSTGSWLDMSGGMH 206


>AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.
          Length = 209

 Score = 20.6 bits (41), Expect = 9.7
 Identities = 10/38 (26%), Positives = 16/38 (42%)
 Frame = -2

Query: 550 GRSEILRSPSTAGGPSWVRLQTTHHLKTAGTPQIQPYS 437
           G+   L   +   G +     +T H   A TP ++P S
Sbjct: 39  GKPPELTGSTNGDGGARSNADSTSHTDGASTPDVRPPS 76


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 20.6 bits (41), Expect = 9.7
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +2

Query: 413 LVATLCRRAVRLNLWSPGC 469
           LV  L +  + +++WSP C
Sbjct: 222 LVWLLSQAWISVHIWSPNC 240


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 9.7
 Identities = 6/15 (40%), Positives = 7/15 (46%)
 Frame = -1

Query: 551 WAIGNLAFTLHCWRP 507
           W +     TLH W P
Sbjct: 470 WLLSQTWITLHIWTP 484


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 9.7
 Identities = 6/15 (40%), Positives = 7/15 (46%)
 Frame = -1

Query: 551 WAIGNLAFTLHCWRP 507
           W +     TLH W P
Sbjct: 470 WLLSQTWITLHIWTP 484


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 20.6 bits (41), Expect = 9.7
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +2

Query: 413 LVATLCRRAVRLNLWSPGC 469
           LV  L +  + +++WSP C
Sbjct: 455 LVWLLSQAWISVHIWSPNC 473


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 20.6 bits (41), Expect = 9.7
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +2

Query: 413 LVATLCRRAVRLNLWSPGC 469
           LV  L +  + +++WSP C
Sbjct: 455 LVWLLSQAWISVHIWSPNC 473


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 9.7
 Identities = 6/15 (40%), Positives = 7/15 (46%)
 Frame = -1

Query: 551 WAIGNLAFTLHCWRP 507
           W +     TLH W P
Sbjct: 470 WLLSQTWITLHIWTP 484


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 9.7
 Identities = 6/15 (40%), Positives = 7/15 (46%)
 Frame = -1

Query: 551 WAIGNLAFTLHCWRP 507
           W +     TLH W P
Sbjct: 470 WLLSQTWITLHIWTP 484


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 20.6 bits (41), Expect = 9.7
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = -3

Query: 399 YVTMLIFLLLVF 364
           Y T  IFLLL+F
Sbjct: 244 YTTYTIFLLLIF 255


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 20.6 bits (41), Expect = 9.7
 Identities = 10/38 (26%), Positives = 16/38 (42%)
 Frame = -2

Query: 550 GRSEILRSPSTAGGPSWVRLQTTHHLKTAGTPQIQPYS 437
           G+   L   +   G +     +T H   A TP ++P S
Sbjct: 195 GKPPELTGSTNGDGGARSNADSTSHTDGASTPDVRPPS 232


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,435
Number of Sequences: 336
Number of extensions: 3120
Number of successful extensions: 15
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13995094
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)