Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10968X
(566 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_16632| Best HMM Match : HSP20 (HMM E-Value=1e-12) 70 1e-12
SB_21425| Best HMM Match : HSP20 (HMM E-Value=1.9e-26) 68 5e-12
SB_38963| Best HMM Match : HSP20 (HMM E-Value=7.3e-26) 62 4e-10
SB_37349| Best HMM Match : HSP20 (HMM E-Value=7.3e-26) 62 4e-10
SB_21424| Best HMM Match : HSP20 (HMM E-Value=0) 60 1e-09
SB_3291| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 1e-09
SB_58906| Best HMM Match : HSP20 (HMM E-Value=3e-26) 58 4e-09
SB_49292| Best HMM Match : HSP20 (HMM E-Value=1.9e-29) 58 4e-09
SB_58907| Best HMM Match : HSP20 (HMM E-Value=4.2e-05) 43 2e-04
SB_6186| Best HMM Match : HSP20 (HMM E-Value=1.1e-06) 37 0.010
SB_24406| Best HMM Match : DUF536 (HMM E-Value=1.5) 31 0.50
SB_13144| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.1
SB_28228| Best HMM Match : Cadherin (HMM E-Value=0) 29 3.5
SB_9507| Best HMM Match : Cadherin (HMM E-Value=0) 29 3.5
SB_42267| Best HMM Match : 2OG-FeII_Oxy (HMM E-Value=5.9e-12) 28 4.6
SB_59802| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.1
SB_45576| Best HMM Match : LRR_1 (HMM E-Value=2.7e-14) 27 8.1
SB_22731| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.1
>SB_16632| Best HMM Match : HSP20 (HMM E-Value=1e-12)
Length = 210
Score = 70.1 bits (164), Expect = 1e-12
Identities = 34/87 (39%), Positives = 56/87 (64%), Gaps = 1/87 (1%)
Frame = +1
Query: 274 DKFQV-NLDVQHFAPEEISVKTADGYIVVEGKHEEKKDQHGYISRQFTRRYALPEGCTAE 450
DK ++ LDV+++ PEEIS+K G I ++GKH+ + +HGY + +F R Y LP+G
Sbjct: 38 DKVEIATLDVKNYRPEEISLKVEHGRIKIDGKHKSE-GEHGYETSEFHRSYNLPDGVDVS 96
Query: 451 SVESRLSSDGVLSVIAPRKGRQQWRVN 531
+V SR++ DG+L + A + Q+ V+
Sbjct: 97 TVSSRITGDGLLHIEALKAEPQETEVS 123
Score = 25.8 bits (54), Expect(2) = 1.2
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +1
Query: 415 RRYALPEGCTAESVESRLSSDGVLSVIAPR 504
R + LP+ +S+ SRL DG L + A R
Sbjct: 161 RHFVLPKDVDMDSLVSRLGKDGKLYIEAKR 190
Score = 23.0 bits (47), Expect(2) = 1.2
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +1
Query: 262 KSDKDKFQVNLDVQHFAPE 318
K D +F V LDV F+P+
Sbjct: 137 KIDDKRFTVTLDVSSFSPD 155
>SB_21425| Best HMM Match : HSP20 (HMM E-Value=1.9e-26)
Length = 185
Score = 68.1 bits (159), Expect = 5e-12
Identities = 35/81 (43%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
Frame = +1
Query: 268 DKDKFQV-NLDVQHFAPEEISVKTADGYIVVEGKHEEKKDQHGYISRQFTRRYALPEGCT 444
D DKFQ+ LDV+ F PEEI+ K +G I V G + ++ G+ S++F R Y LPEG
Sbjct: 2 DADKFQIATLDVREFKPEEITCKVENGKIKVSGLQRHESEE-GFDSKEFRRCYNLPEGVD 60
Query: 445 AESVESRLSSDGVLSVIAPRK 507
S+ +R++ DG+L V A +K
Sbjct: 61 ESSISTRIAEDGMLHVEALKK 81
Score = 54.8 bits (126), Expect = 5e-08
Identities = 30/85 (35%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
Frame = +1
Query: 268 DKDKFQVNLDVQHFAPEEISVKTADGYIVVEGKHEEKKDQHGYIS-RQFTRRYALPEGCT 444
D KF + LDV F PEE+ VK + V + E ++HG+ + RQF R + LP
Sbjct: 96 DDTKFTLALDVSDFKPEEVDVKVYGHELSVRARQE--CEEHGFFTARQFNRHFVLPREVD 153
Query: 445 AESVESRLSSDGVLSVIAPRKGRQQ 519
+++ RL DGVL + A ++ +Q
Sbjct: 154 MDTLVPRLGKDGVLYIEADKRPLRQ 178
>SB_38963| Best HMM Match : HSP20 (HMM E-Value=7.3e-26)
Length = 190
Score = 61.7 bits (143), Expect = 4e-10
Identities = 29/79 (36%), Positives = 53/79 (67%), Gaps = 1/79 (1%)
Frame = +1
Query: 265 SDKDKFQV-NLDVQHFAPEEISVKTADGYIVVEGKHEEKKDQHGYISRQFTRRYALPEGC 441
++++K ++ LDV+ + PEEIS K +G++ V+G+H + G+ ++F R +ALPEG
Sbjct: 2 ANENKLEIAKLDVREYRPEEISFKVENGFVKVQGRH-VNEGPFGFELKEFRRTFALPEGV 60
Query: 442 TAESVESRLSSDGVLSVIA 498
A +V++R+S+ G L + A
Sbjct: 61 EASNVKTRISNHGQLHIEA 79
Score = 49.2 bits (112), Expect = 2e-06
Identities = 24/78 (30%), Positives = 41/78 (52%)
Frame = +1
Query: 274 DKFQVNLDVQHFAPEEISVKTADGYIVVEGKHEEKKDQHGYISRQFTRRYALPEGCTAES 453
DKF + +DV F P+ I V+ ++V HE + + H Y + F R++ LP +S
Sbjct: 97 DKFSMAMDVTGFPPDSIKVQVLGNELLVSANHEVEHEGH-YHAMHFNRQFVLPREVDMDS 155
Query: 454 VESRLSSDGVLSVIAPRK 507
+ +RL +G L A ++
Sbjct: 156 LTTRLDKEGKLHFEAKKR 173
>SB_37349| Best HMM Match : HSP20 (HMM E-Value=7.3e-26)
Length = 190
Score = 61.7 bits (143), Expect = 4e-10
Identities = 29/79 (36%), Positives = 53/79 (67%), Gaps = 1/79 (1%)
Frame = +1
Query: 265 SDKDKFQV-NLDVQHFAPEEISVKTADGYIVVEGKHEEKKDQHGYISRQFTRRYALPEGC 441
++++K ++ LDV+ + PEEIS K +G++ V+G+H + G+ ++F R +ALPEG
Sbjct: 2 ANENKLEIAKLDVREYRPEEISFKVENGFVKVQGRH-VNEGPFGFELKEFRRTFALPEGV 60
Query: 442 TAESVESRLSSDGVLSVIA 498
A +V++R+S+ G L + A
Sbjct: 61 EASNVKTRISNHGQLHIEA 79
Score = 49.2 bits (112), Expect = 2e-06
Identities = 24/78 (30%), Positives = 41/78 (52%)
Frame = +1
Query: 274 DKFQVNLDVQHFAPEEISVKTADGYIVVEGKHEEKKDQHGYISRQFTRRYALPEGCTAES 453
DKF + +DV F P+ I V+ ++V HE + + H Y + F R++ LP +S
Sbjct: 97 DKFSMAMDVTGFPPDSIKVQVLGNELLVSANHEVEHEGH-YHAMHFNRQFVLPREVDMDS 155
Query: 454 VESRLSSDGVLSVIAPRK 507
+ +RL +G L A ++
Sbjct: 156 LTTRLDKEGKLHFEAKKR 173
>SB_21424| Best HMM Match : HSP20 (HMM E-Value=0)
Length = 424
Score = 60.1 bits (139), Expect = 1e-09
Identities = 28/79 (35%), Positives = 52/79 (65%), Gaps = 1/79 (1%)
Frame = +1
Query: 265 SDKDKFQV-NLDVQHFAPEEISVKTADGYIVVEGKHEEKKDQHGYISRQFTRRYALPEGC 441
++++K ++ LDV+ + PEEIS K +G++ V+G+H + G+ ++F R + LPEG
Sbjct: 2 ANENKLEIAKLDVREYRPEEISFKVENGFVKVQGRH-VNEGPFGFELKEFRRTFTLPEGV 60
Query: 442 TAESVESRLSSDGVLSVIA 498
A +V++R+S+ G L + A
Sbjct: 61 EASNVKTRISNHGQLHIEA 79
Score = 59.3 bits (137), Expect = 2e-09
Identities = 28/76 (36%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Frame = +1
Query: 274 DKFQV-NLDVQHFAPEEISVKTADGYIVVEGKHEEKKDQHGYISRQFTRRYALPEGCTAE 450
D+ ++ LDV+ + PEEIS K +G++ V+G+H + G+ ++F R + LPEG A
Sbjct: 239 DELEIAKLDVREYRPEEISFKVENGFVKVQGRH-VNEGPFGFELKEFRRTFTLPEGVEAS 297
Query: 451 SVESRLSSDGVLSVIA 498
+V++R+S+ G L + A
Sbjct: 298 NVKTRISNHGQLHIEA 313
Score = 49.2 bits (112), Expect = 2e-06
Identities = 24/78 (30%), Positives = 41/78 (52%)
Frame = +1
Query: 274 DKFQVNLDVQHFAPEEISVKTADGYIVVEGKHEEKKDQHGYISRQFTRRYALPEGCTAES 453
DKF + +DV F P+ I V+ ++V HE + + H Y + F R++ LP +S
Sbjct: 97 DKFSMAMDVTGFPPDSIKVQVLGNELLVSANHEVEHEGH-YHAMHFNRQFVLPREVDMDS 155
Query: 454 VESRLSSDGVLSVIAPRK 507
+ +RL +G L A ++
Sbjct: 156 LTTRLDKEGKLHFEAKKR 173
Score = 49.2 bits (112), Expect = 2e-06
Identities = 24/78 (30%), Positives = 41/78 (52%)
Frame = +1
Query: 274 DKFQVNLDVQHFAPEEISVKTADGYIVVEGKHEEKKDQHGYISRQFTRRYALPEGCTAES 453
DKF + +DV F P+ I V+ ++V HE + + H Y + F R++ LP +S
Sbjct: 331 DKFSMAMDVTGFPPDSIKVQVLGNELLVSANHEVEHEGH-YHAMHFNRQFVLPREVDMDS 389
Query: 454 VESRLSSDGVLSVIAPRK 507
+ +RL +G L A ++
Sbjct: 390 LTTRLDKEGKLHFEAKKR 407
>SB_3291| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 760
Score = 60.1 bits (139), Expect = 1e-09
Identities = 28/79 (35%), Positives = 52/79 (65%), Gaps = 1/79 (1%)
Frame = +1
Query: 265 SDKDKFQV-NLDVQHFAPEEISVKTADGYIVVEGKHEEKKDQHGYISRQFTRRYALPEGC 441
++++K ++ LDV+ + PEEIS K +G++ V+G+H + G+ ++F R + LPEG
Sbjct: 2 ANENKLEIAKLDVREYRPEEISFKVENGFVKVQGRH-VNEGPFGFELKEFRRTFTLPEGV 60
Query: 442 TAESVESRLSSDGVLSVIA 498
A +V++R+S+ G L + A
Sbjct: 61 EASNVKTRISNHGQLHIEA 79
Score = 49.2 bits (112), Expect = 2e-06
Identities = 24/78 (30%), Positives = 41/78 (52%)
Frame = +1
Query: 274 DKFQVNLDVQHFAPEEISVKTADGYIVVEGKHEEKKDQHGYISRQFTRRYALPEGCTAES 453
DKF + +DV F P+ I V+ ++V HE + + H Y + F R++ LP +S
Sbjct: 97 DKFSMAMDVTGFPPDSIKVQVLGNELLVSANHEVEHEGH-YHAMHFNRQFVLPREVDMDS 155
Query: 454 VESRLSSDGVLSVIAPRK 507
+ +RL +G L A ++
Sbjct: 156 LTTRLDKEGKLHFEAKKR 173
>SB_58906| Best HMM Match : HSP20 (HMM E-Value=3e-26)
Length = 695
Score = 58.4 bits (135), Expect = 4e-09
Identities = 28/79 (35%), Positives = 51/79 (64%), Gaps = 1/79 (1%)
Frame = +1
Query: 265 SDKDKFQV-NLDVQHFAPEEISVKTADGYIVVEGKHEEKKDQHGYISRQFTRRYALPEGC 441
++++K ++ LDV+ + PEEIS K +G + V+G+H + G+ ++F R + LPEG
Sbjct: 3 NNENKLEIAKLDVREYRPEEISFKVENGVVKVQGRH-VNEGPFGFELKEFRRTFTLPEGV 61
Query: 442 TAESVESRLSSDGVLSVIA 498
A +V++R+S+ G L + A
Sbjct: 62 EASNVKTRISNHGQLHIEA 80
Score = 51.6 bits (118), Expect = 4e-07
Identities = 26/82 (31%), Positives = 44/82 (53%)
Frame = +1
Query: 262 KSDKDKFQVNLDVQHFAPEEISVKTADGYIVVEGKHEEKKDQHGYISRQFTRRYALPEGC 441
+S DKF + +DV+ F PE I V+ ++V HE + + H Y + F R++ LP
Sbjct: 93 ESKDDKFSMAMDVKGFPPEAIKVQVLGNELLVSANHEVEHEGH-YHAMHFNRQFILPREV 151
Query: 442 TAESVESRLSSDGVLSVIAPRK 507
+S+ +RL +G L A ++
Sbjct: 152 DMDSLTTRLDKEGKLHFEAKKR 173
>SB_49292| Best HMM Match : HSP20 (HMM E-Value=1.9e-29)
Length = 189
Score = 58.4 bits (135), Expect = 4e-09
Identities = 28/69 (40%), Positives = 44/69 (63%)
Frame = +1
Query: 292 LDVQHFAPEEISVKTADGYIVVEGKHEEKKDQHGYISRQFTRRYALPEGCTAESVESRLS 471
LDV+ + PEEIS K +G + V+G+H + + G+ ++F R + LPEG E+V SR+S
Sbjct: 12 LDVKEYRPEEISFKVENGVVKVQGRH-VNEGEFGFELKEFRRTFTLPEGIDPENVTSRIS 70
Query: 472 SDGVLSVIA 498
+ G L + A
Sbjct: 71 NHGHLHIEA 79
Score = 52.0 bits (119), Expect = 3e-07
Identities = 25/75 (33%), Positives = 41/75 (54%)
Frame = +1
Query: 262 KSDKDKFQVNLDVQHFAPEEISVKTADGYIVVEGKHEEKKDQHGYISRQFTRRYALPEGC 441
K+ +DKF + +DV F PE I V+ ++V HE + + H Y + F R++ LP
Sbjct: 92 KAKEDKFSMAIDVAGFPPESIKVQVLGNELLVNANHEVEHEGH-YHAMHFNRQFVLPREV 150
Query: 442 TAESVESRLSSDGVL 486
+S+ +RL +G L
Sbjct: 151 DMDSLTTRLDKEGKL 165
>SB_58907| Best HMM Match : HSP20 (HMM E-Value=4.2e-05)
Length = 259
Score = 42.7 bits (96), Expect = 2e-04
Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Frame = +1
Query: 268 DKDKFQVNLDVQHFAPEEISVKTADGYIVVEGKHEEKKDQHGYI-SRQFTRRYALPE 435
D KF + LDV F PEE+ VK + V + E ++HG+ +RQF R + LP+
Sbjct: 24 DDTKFTLALDVSDFKPEEVDVKVYGHELSVRARQE--CEEHGFFTARQFNRHFVLPQ 78
>SB_6186| Best HMM Match : HSP20 (HMM E-Value=1.1e-06)
Length = 237
Score = 37.1 bits (82), Expect = 0.010
Identities = 19/83 (22%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Frame = +1
Query: 262 KSDKDKFQVNLDVQHFAPEEISVKTADGYIVVEGKHEEKKDQHGYIS-RQFTRRYALPEG 438
++DK+ ++ ++V+ FA +++S++ ++++G+ +K D G+ RQF R P+
Sbjct: 94 QNDKNGIKLEMNVRGFAAKDVSLQVDGQDLIIKGEKMDKDD--GWCKMRQFCWRRRFPKS 151
Query: 439 CTAESVESRLSSDGVLSVIAPRK 507
+S+++ L +L + A ++
Sbjct: 152 TDMKSIKATLKYGDILEIEAQKE 174
>SB_24406| Best HMM Match : DUF536 (HMM E-Value=1.5)
Length = 436
Score = 31.5 bits (68), Expect = 0.50
Identities = 11/22 (50%), Positives = 18/22 (81%)
Frame = +1
Query: 364 KHEEKKDQHGYISRQFTRRYAL 429
KHEE++D+HGY+ + T ++AL
Sbjct: 72 KHEEREDRHGYLKDKVTLQHAL 93
>SB_13144| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 266
Score = 30.3 bits (65), Expect = 1.1
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = +1
Query: 328 VKTADGYIVVEGKHEEKKDQHGYISRQFTRRYALPE 435
+++A GY+V G H K + G + + R LP+
Sbjct: 10 IRSARGYVVTSGSHTSKSEVRGIMEETCSNRNPLPQ 45
>SB_28228| Best HMM Match : Cadherin (HMM E-Value=0)
Length = 838
Score = 28.7 bits (61), Expect = 3.5
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 3/38 (7%)
Frame = +2
Query: 170 LSAAAGPLVSR---EYYRPWRHLAAAARDLGSASKVTR 274
L+A G + +R + + PW +L A DLG S VTR
Sbjct: 558 LNAVTGSITTRGRSDLFLPWYNLTVEAFDLGKPSLVTR 595
>SB_9507| Best HMM Match : Cadherin (HMM E-Value=0)
Length = 2735
Score = 28.7 bits (61), Expect = 3.5
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 3/38 (7%)
Frame = +2
Query: 170 LSAAAGPLVSR---EYYRPWRHLAAAARDLGSASKVTR 274
L+A G + +R + + PW +L A DLG S VTR
Sbjct: 579 LNAVTGSITTRGRSDLFLPWYNLTVEAFDLGKPSLVTR 616
>SB_42267| Best HMM Match : 2OG-FeII_Oxy (HMM E-Value=5.9e-12)
Length = 902
Score = 28.3 bits (60), Expect = 4.6
Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
Frame = +3
Query: 348 HRG*RQTRGEE--RSAWLH-IASIHSSLRFAGGLYG*ICGVPAVFRWCVVCNRTQEGPPA 518
H G +GE+ +AWL+ I I+S F G L+ G + + RT +GPP
Sbjct: 810 HGGCDVIKGEKWIANAWLNVIGEINSDESFKGWLHS-YEGEDGLIAENMQTERTLQGPPG 868
Query: 519 VEGE 530
EGE
Sbjct: 869 KEGE 872
>SB_59802| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3213
Score = 27.5 bits (58), Expect = 8.1
Identities = 22/79 (27%), Positives = 34/79 (43%), Gaps = 5/79 (6%)
Frame = +1
Query: 256 SIKSDKDKFQVNLDVQHFAPEEISVKTADGYIVVEGKHEE-----KKDQHGYISRQFTRR 420
+I S +DK + + HFA E+ V+ YI E E +K Q +QF +
Sbjct: 1368 AIDSVRDKGEQLISCGHFAASEVEVRIEALYIQWEELLEASATKGRKLQEARDHQQFNQE 1427
Query: 421 YALPEGCTAESVESRLSSD 477
+ + C + LSSD
Sbjct: 1428 VDIADSCITDKETIVLSSD 1446
>SB_45576| Best HMM Match : LRR_1 (HMM E-Value=2.7e-14)
Length = 829
Score = 27.5 bits (58), Expect = 8.1
Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = -3
Query: 453 RFSRTALRQSVATSELTRYVTMLIFLLLVFAFNHDVAVRRFNRDF-FRGEML 301
RF+ + S + L Y +L+F ++F +N +FNR F F+ E++
Sbjct: 303 RFTCYNVLSSYFSVTLCIYYILLVFCAVIFVYNCAWTYTKFNRPFDFKKELM 354
>SB_22731| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 56
Score = 27.5 bits (58), Expect = 8.1
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = -2
Query: 499 VRLQTTHHLKTAGTPQIQPYSP 434
VR +T HH K P I+PY P
Sbjct: 29 VRERTGHHKKCGALPSIKPYLP 50
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,743,251
Number of Sequences: 59808
Number of extensions: 422909
Number of successful extensions: 1228
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1092
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1223
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1337207630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -