Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10959X
         (422 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q5MGF5 Cluster: Putative uncharacterized protein; n=2; ...    40   0.028
UniRef50_Q65NQ9 Cluster: Peptidoglycan DL-endopeptidase cwlO pre...    35   0.60 
UniRef50_Q0BU79 Cluster: Hypothetical cytosolic protein; n=1; Gr...    34   1.4  
UniRef50_P28618 Cluster: Pyrrolidone-carboxylate peptidase; n=12...    33   3.2  
UniRef50_O44565 Cluster: Laminin related. see also lmb-protein 1...    32   4.2  
UniRef50_Q4TGD5 Cluster: Chromosome undetermined SCAF3766, whole...    32   5.6  
UniRef50_A2WNG4 Cluster: Putative uncharacterized protein; n=3; ...    32   5.6  
UniRef50_Q1JZA1 Cluster: Putative uncharacterized protein; n=1; ...    31   7.4  

>UniRef50_Q5MGF5 Cluster: Putative uncharacterized protein; n=2;
           Bombycoidea|Rep: Putative uncharacterized protein -
           Lonomia obliqua (Moth)
          Length = 74

 Score = 39.5 bits (88), Expect = 0.028
 Identities = 16/18 (88%), Positives = 18/18 (100%)
 Frame = +1

Query: 133 IYGTGGLLTPLVAPVLGF 186
           IYGTGGLLTP+VAP+LGF
Sbjct: 17  IYGTGGLLTPIVAPMLGF 34



 Score = 33.1 bits (72), Expect = 2.4
 Identities = 13/17 (76%), Positives = 17/17 (100%)
 Frame = +3

Query: 255 GSIVSQLTAAAMVAPTP 305
           GS++SQLT+AAM+APTP
Sbjct: 58  GSVISQLTSAAMLAPTP 74


>UniRef50_Q65NQ9 Cluster: Peptidoglycan DL-endopeptidase cwlO
           precursor; n=1; Bacillus licheniformis ATCC 14580|Rep:
           Peptidoglycan DL-endopeptidase cwlO precursor - Bacillus
           licheniformis (strain DSM 13 / ATCC 14580)
          Length = 452

 Score = 35.1 bits (77), Expect = 0.60
 Identities = 26/74 (35%), Positives = 35/74 (47%), Gaps = 3/74 (4%)
 Frame = +3

Query: 57  ARREQKLKEHGASSCISGKRGRRCCNIWH---WGSVDSISGSRARVQLSGNSGRKHSRCC 227
           A  EQKLKE  A++  + K               S  S SGS ++   S NSG   S+  
Sbjct: 245 AALEQKLKEERAAAAAAAKAKEESATAEKSDSGSSSSSNSGSVSKSDGSSNSGSSSSKKS 304

Query: 228 TSILRKFSGGSIVS 269
           +S  R +S GS+VS
Sbjct: 305 SSPSRNYSSGSVVS 318


>UniRef50_Q0BU79 Cluster: Hypothetical cytosolic protein; n=1;
           Granulibacter bethesdensis CGDNIH1|Rep: Hypothetical
           cytosolic protein - Granulobacter bethesdensis (strain
           ATCC BAA-1260 / CGDNIH1)
          Length = 90

 Score = 33.9 bits (74), Expect = 1.4
 Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
 Frame = +3

Query: 69  QKLKEHGA--SSCISGKRGRRCCNIWHWGSVDSISGSRAR 182
           Q L+EHG    S ++G+R  RC N WH G  D +   R R
Sbjct: 42  QALREHGTFQGSMLAGRRILRC-NPWHQGGYDPVPAGRCR 80


>UniRef50_P28618 Cluster: Pyrrolidone-carboxylate peptidase; n=12;
           Bacilli|Rep: Pyrrolidone-carboxylate peptidase -
           Bacillus subtilis
          Length = 215

 Score = 32.7 bits (71), Expect = 3.2
 Identities = 15/47 (31%), Positives = 24/47 (51%)
 Frame = +3

Query: 48  LRIARREQKLKEHGASSCISGKRGRRCCNIWHWGSVDSISGSRARVQ 188
           L + R   K+KEHG  + +S   G   CN   +G +D IS +   ++
Sbjct: 117 LPVKRMTAKMKEHGIPAAVSYTAGTFVCNYLFYGLMDHISRTSPHIR 163


>UniRef50_O44565 Cluster: Laminin related. see also lmb-protein 1;
            n=2; Caenorhabditis|Rep: Laminin related. see also
            lmb-protein 1 - Caenorhabditis elegans
          Length = 1067

 Score = 32.3 bits (70), Expect = 4.2
 Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
 Frame = +3

Query: 96   SCISGKRGRRC--CNIWHWGSVDSISGSRARVQLSGN 200
            +C SG +G RC  C   HWGS   + G+  R   +GN
Sbjct: 973  NCKSGYQGERCGECAQNHWGSPREVGGTCERCDCNGN 1009


>UniRef50_Q4TGD5 Cluster: Chromosome undetermined SCAF3766, whole
           genome shotgun sequence; n=1; Tetraodon
           nigroviridis|Rep: Chromosome undetermined SCAF3766,
           whole genome shotgun sequence - Tetraodon nigroviridis
           (Green puffer)
          Length = 328

 Score = 31.9 bits (69), Expect = 5.6
 Identities = 13/29 (44%), Positives = 20/29 (68%)
 Frame = -2

Query: 178 AREPLMESTDPQCHILQHRRPRLPLMQLE 92
           A +PL   T+P+  +LQ+RRP+L L  L+
Sbjct: 5   AEQPLSLRTEPKLRVLQYRRPKLELQLLK 33


>UniRef50_A2WNG4 Cluster: Putative uncharacterized protein; n=3;
           Oryza sativa|Rep: Putative uncharacterized protein -
           Oryza sativa subsp. indica (Rice)
          Length = 604

 Score = 31.9 bits (69), Expect = 5.6
 Identities = 21/49 (42%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
 Frame = +3

Query: 171 SRARVQLSGNSGRKHSRCCTS-ILRKFSGGSIVSQLTAAAMVAPTP*GD 314
           S++ V LS  +GRK  R C+  ++R     SI + LT+AA+V P P GD
Sbjct: 138 SQSIVSLSSFAGRKRIRVCSGFVIRWNDSTSIGTILTSAALVRP-PCGD 185


>UniRef50_Q1JZA1 Cluster: Putative uncharacterized protein; n=1;
           Desulfuromonas acetoxidans DSM 684|Rep: Putative
           uncharacterized protein - Desulfuromonas acetoxidans DSM
           684
          Length = 424

 Score = 31.5 bits (68), Expect = 7.4
 Identities = 16/41 (39%), Positives = 20/41 (48%)
 Frame = -2

Query: 349 SWSDVENG*CLASPHGVGATMAAAVNCDTMLPPLNFRSMLV 227
           SW D   G C  S    G  MA  + CD +LP L  + +LV
Sbjct: 101 SWVDASGGGCRLSIKRGGVGMARKLGCDLVLPYLADKGLLV 141


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 394,920,453
Number of Sequences: 1657284
Number of extensions: 7059661
Number of successful extensions: 15851
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 15475
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15849
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 19810951153
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)