Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10959X
         (422 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    20   8.6  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    20   8.6  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    20   8.6  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    20   8.6  

>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 20.2 bits (40), Expect = 8.6
 Identities = 11/38 (28%), Positives = 18/38 (47%)
 Frame = +3

Query: 138 WHWGSVDSISGSRARVQLSGNSGRKHSRCCTSILRKFS 251
           W   S+D+ +  +  + +  N G + S    SIL  FS
Sbjct: 29  WSKTSLDNATEHKLPISMRFNEGHQLSIIVYSILMVFS 66



 Score = 20.2 bits (40), Expect = 8.6
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +3

Query: 297 PTP*GDAKHHPFSTSLQ 347
           PTP GD++  P   SL+
Sbjct: 359 PTPNGDSRLPPLEISLK 375


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 20.2 bits (40), Expect = 8.6
 Identities = 11/38 (28%), Positives = 18/38 (47%)
 Frame = +3

Query: 138 WHWGSVDSISGSRARVQLSGNSGRKHSRCCTSILRKFS 251
           W   S+D+ +  +  + +  N G + S    SIL  FS
Sbjct: 29  WSKTSLDNATEHKLPISMRFNEGHQLSIIVYSILMVFS 66



 Score = 20.2 bits (40), Expect = 8.6
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +3

Query: 297 PTP*GDAKHHPFSTSLQ 347
           PTP GD++  P   SL+
Sbjct: 359 PTPNGDSRLPPLEISLK 375


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 20.2 bits (40), Expect = 8.6
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = +1

Query: 340 RSRIGPFLFY 369
           R R+ P+LFY
Sbjct: 115 RDRVNPYLFY 124


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 20.2 bits (40), Expect = 8.6
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -3

Query: 417 HRIDKFIRNLNA 382
           HR+ K I+ LNA
Sbjct: 220 HRLSKLIKQLNA 231


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,933
Number of Sequences: 336
Number of extensions: 1863
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  9384961
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)