Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10958X
(315 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5MGF5 Cluster: Putative uncharacterized protein; n=2; ... 50 8e-06
UniRef50_A1ZZ25 Cluster: Putative uncharacterized protein; n=1; ... 35 0.31
UniRef50_Q0BU79 Cluster: Hypothetical cytosolic protein; n=1; Gr... 34 0.71
UniRef50_Q65NQ9 Cluster: Peptidoglycan DL-endopeptidase cwlO pre... 33 0.93
UniRef50_P28618 Cluster: Pyrrolidone-carboxylate peptidase; n=12... 32 2.2
UniRef50_Q4TGD5 Cluster: Chromosome undetermined SCAF3766, whole... 32 2.9
UniRef50_O44565 Cluster: Laminin related. see also lmb-protein 1... 32 2.9
UniRef50_A4FTJ8 Cluster: Putative uncharacterized protein; n=2; ... 31 5.0
UniRef50_A3WU22 Cluster: Prophage LambdaMc01, DNA methyltransfer... 30 8.7
>UniRef50_Q5MGF5 Cluster: Putative uncharacterized protein; n=2;
Bombycoidea|Rep: Putative uncharacterized protein -
Lonomia obliqua (Moth)
Length = 74
Score = 50.4 bits (115), Expect = 8e-06
Identities = 25/58 (43%), Positives = 31/58 (53%)
Frame = +2
Query: 137 IYGTGGLLTPLVAPVLXXXXXXXXXXXXXXXXXXYYGNLXPAALCHS*RDAAMVAPTP 310
IYGTGGLLTP+VAP+L YYGN+ ++ AAM+APTP
Sbjct: 17 IYGTGGLLTPIVAPMLGFGSAGIAAGSTAAAAQAYYGNVVAGSVISQLTSAAMLAPTP 74
>UniRef50_A1ZZ25 Cluster: Putative uncharacterized protein; n=1;
Microscilla marina ATCC 23134|Rep: Putative
uncharacterized protein - Microscilla marina ATCC 23134
Length = 203
Score = 35.1 bits (77), Expect = 0.31
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = -2
Query: 296 PWQHHVNCDTMLPAXNFRSMLVQQRLCFLPLFPLS 192
PW+HH D LP NF +QQ L +P LS
Sbjct: 137 PWEHHFGEDNCLPLANFSPETLQQHLQKMPFLKLS 171
>UniRef50_Q0BU79 Cluster: Hypothetical cytosolic protein; n=1;
Granulibacter bethesdensis CGDNIH1|Rep: Hypothetical
cytosolic protein - Granulobacter bethesdensis (strain
ATCC BAA-1260 / CGDNIH1)
Length = 90
Score = 33.9 bits (74), Expect = 0.71
Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Frame = +1
Query: 73 QKLKEHGA--SSCISGKRGRRCCNIWHWGSVDSISGSRAR 186
Q L+EHG S ++G+R RC N WH G D + R R
Sbjct: 42 QALREHGTFQGSMLAGRRILRC-NPWHQGGYDPVPAGRCR 80
>UniRef50_Q65NQ9 Cluster: Peptidoglycan DL-endopeptidase cwlO
precursor; n=1; Bacillus licheniformis ATCC 14580|Rep:
Peptidoglycan DL-endopeptidase cwlO precursor - Bacillus
licheniformis (strain DSM 13 / ATCC 14580)
Length = 452
Score = 33.5 bits (73), Expect = 0.93
Identities = 25/74 (33%), Positives = 35/74 (47%), Gaps = 3/74 (4%)
Frame = +1
Query: 61 ARREQKLKEHGASSCISGKRGRRCCNIWH---WGSVDSISGSRARFQLSGNSGRKHSRCC 231
A EQKLKE A++ + K S S SGS ++ S NSG S+
Sbjct: 245 AALEQKLKEERAAAAAAAKAKEESATAEKSDSGSSSSSNSGSVSKSDGSSNSGSSSSKKS 304
Query: 232 TSILRKFXAGSIVS 273
+S R + +GS+VS
Sbjct: 305 SSPSRNYSSGSVVS 318
>UniRef50_P28618 Cluster: Pyrrolidone-carboxylate peptidase; n=12;
Bacilli|Rep: Pyrrolidone-carboxylate peptidase -
Bacillus subtilis
Length = 215
Score = 32.3 bits (70), Expect = 2.2
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +1
Query: 52 LRIARREQKLKEHGASSCISGKRGRRCCNIWHWGSVDSIS 171
L + R K+KEHG + +S G CN +G +D IS
Sbjct: 117 LPVKRMTAKMKEHGIPAAVSYTAGTFVCNYLFYGLMDHIS 156
>UniRef50_Q4TGD5 Cluster: Chromosome undetermined SCAF3766, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF3766,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 328
Score = 31.9 bits (69), Expect = 2.9
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = -2
Query: 182 AREPLMESTDPQCHILQHRRPRLPLMQLE 96
A +PL T+P+ +LQ+RRP+L L L+
Sbjct: 5 AEQPLSLRTEPKLRVLQYRRPKLELQLLK 33
>UniRef50_O44565 Cluster: Laminin related. see also lmb-protein 1;
n=2; Caenorhabditis|Rep: Laminin related. see also
lmb-protein 1 - Caenorhabditis elegans
Length = 1067
Score = 31.9 bits (69), Expect = 2.9
Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
Frame = +1
Query: 100 SCISGKRGRRC--CNIWHWGSVDSISGSRARFQLSGN 204
+C SG +G RC C HWGS + G+ R +GN
Sbjct: 973 NCKSGYQGERCGECAQNHWGSPREVGGTCERCDCNGN 1009
>UniRef50_A4FTJ8 Cluster: Putative uncharacterized protein; n=2; Koi
herpesvirus|Rep: Putative uncharacterized protein - Koi
herpesvirus
Length = 732
Score = 31.1 bits (67), Expect = 5.0
Identities = 14/39 (35%), Positives = 24/39 (61%)
Frame = +1
Query: 43 HLYLRIARREQKLKEHGASSCISGKRGRRCCNIWHWGSV 159
H+ + +AR E++L++ AS C+S R R C +W G +
Sbjct: 254 HMQILLARSERELRKVSAS-CMSFSRTTRSCQMWTRGEL 291
>UniRef50_A3WU22 Cluster: Prophage LambdaMc01, DNA
methyltransferase; n=4; Alphaproteobacteria|Rep:
Prophage LambdaMc01, DNA methyltransferase - Nitrobacter
sp. Nb-311A
Length = 451
Score = 30.3 bits (65), Expect = 8.7
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +1
Query: 112 GKRGRRCCNIWHWGSVDSISGSR 180
GK GR N+W + SV+S+ GSR
Sbjct: 346 GKYGRNRTNVWDYASVNSMRGSR 368
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 274,838,370
Number of Sequences: 1657284
Number of extensions: 4356044
Number of successful extensions: 10030
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9798
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10028
length of database: 575,637,011
effective HSP length: 81
effective length of database: 441,397,007
effective search space used: 10152131161
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -