Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10958X
         (315 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB126079-1|BAD20206.1|  202|Homo sapiens keratin associated prot...    31   0.94 
BC029819-1|AAH29819.1|  483|Homo sapiens dual oxidase maturation...    29   2.9  
AJ628245-1|CAF31637.1|  177|Homo sapiens keratin associated prot...    28   6.6  
AB126071-1|BAD20198.1|  177|Homo sapiens keratin associated prot...    28   6.6  
BC000952-1|AAH00952.1|  477|Homo sapiens hypothetical protein FL...    27   8.8  
AL109810-4|CAI19162.1|  230|Homo sapiens tripartite motif-contai...    27   8.8  

>AB126079-1|BAD20206.1|  202|Homo sapiens keratin associated protein
           protein.
          Length = 202

 Score = 30.7 bits (66), Expect = 0.94
 Identities = 15/33 (45%), Positives = 18/33 (54%)
 Frame = -3

Query: 307 RGGYHGSITSTVTQCCRP*ISVVCLCSSGCASC 209
           +GG  GS   +   CC+P     C CSSGC SC
Sbjct: 131 KGGC-GSCGCSQCNCCKP-----CCCSSGCGSC 157


>BC029819-1|AAH29819.1|  483|Homo sapiens dual oxidase maturation
           factor 1 protein.
          Length = 483

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 20/55 (36%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
 Frame = +1

Query: 70  EQKLKEHGASSCISGKRGRRCCNIWHWGSVD-SISGSRARF-QLSGNSGRKHSRC 228
           E++  EH   S     RGR    +W WGS +    G RA   +L  NSG K   C
Sbjct: 396 EERWAEHTGDSP-RPLRGRGTGRLWRWGSKERRACGVRAMLPRLVSNSGLKRPSC 449


>AJ628245-1|CAF31637.1|  177|Homo sapiens keratin associated protein
           5-8 protein.
          Length = 177

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 14/32 (43%), Positives = 18/32 (56%)
 Frame = -3

Query: 307 RGGYHGSITSTVTQCCRP*ISVVCLCSSGCAS 212
           +GG  GS   + + CC+P     C CSSGC S
Sbjct: 105 KGGC-GSCGCSQSSCCKP-----CCCSSGCGS 130


>AB126071-1|BAD20198.1|  177|Homo sapiens keratin associated protein
           protein.
          Length = 177

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 14/32 (43%), Positives = 18/32 (56%)
 Frame = -3

Query: 307 RGGYHGSITSTVTQCCRP*ISVVCLCSSGCAS 212
           +GG  GS   + + CC+P     C CSSGC S
Sbjct: 105 KGGC-GSCGCSQSSCCKP-----CCCSSGCGS 130


>BC000952-1|AAH00952.1|  477|Homo sapiens hypothetical protein
           FLJ20628 protein.
          Length = 477

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 18/54 (33%), Positives = 24/54 (44%)
 Frame = +1

Query: 109 SGKRGRRCCNIWHWGSVDSISGSRARFQLSGNSGRKHSRCCTSILRKFXAGSIV 270
           SG +GR  C   H GS D    S+A+  +          C TS  R F AG ++
Sbjct: 106 SGDQGR--CGPTHQGSEDPSMLSQAQSAIEVEERHVSPSCSTSRERPFQAGELI 157


>AL109810-4|CAI19162.1|  230|Homo sapiens tripartite
           motif-containing 67 protein.
          Length = 230

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 13/33 (39%), Positives = 21/33 (63%)
 Frame = -2

Query: 176 EPLMESTDPQCHILQHRRPRLPLMQLEAPCSFN 78
           EPL+++   Q   +Q + P +PL+QLE  C+ N
Sbjct: 61  EPLLQAIH-QLDFIQMKLPPVPLLQLEKCCTRN 92


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 41,431,882
Number of Sequences: 237096
Number of extensions: 693799
Number of successful extensions: 1503
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1419
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1503
length of database: 76,859,062
effective HSP length: 79
effective length of database: 58,128,478
effective search space used: 1453211950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)