Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10954
         (617 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    22   3.6  
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    22   3.6  
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    21   6.3  
U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    21   8.3  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   8.3  

>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = -3

Query: 294 RIYHQNHDPLRRSARNLV 241
           R +H+ HD  R S+R ++
Sbjct: 260 RHFHEEHDTRRASSRGII 277


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 7/17 (41%), Positives = 14/17 (82%)
 Frame = -2

Query: 553 LVHGILSDVCEVPQVAS 503
           +VHG+ +++C + QVA+
Sbjct: 213 IVHGVHNELCNLCQVAN 229


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = -1

Query: 611 P*GRLCPRSWECRRRAP 561
           P G+ C R W+C+   P
Sbjct: 165 PLGKSCNRYWQCQGGYP 181


>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
           protein protein.
          Length = 372

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 5/12 (41%), Positives = 8/12 (66%)
 Frame = +3

Query: 552 SCCWGPPTAFPR 587
           +CCWG   + P+
Sbjct: 12  ACCWGKSLSIPQ 23


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = -2

Query: 151 VFYCPCRQTSIRPT*YWVVTVA 86
           +FY P RQT   P  Y+   VA
Sbjct: 105 LFYYPSRQTLYTPVQYFKDLVA 126


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,301
Number of Sequences: 336
Number of extensions: 2825
Number of successful extensions: 13
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15770591
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)