Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10953
         (622 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z93395-7|CAH04744.1| 2389|Caenorhabditis elegans Hypothetical pr...    28   6.2  
Z93395-6|CAB07708.1| 3375|Caenorhabditis elegans Hypothetical pr...    28   6.2  
Z93395-4|CAB07707.1| 2295|Caenorhabditis elegans Hypothetical pr...    28   6.2  
Z93395-3|CAB07706.1| 2482|Caenorhabditis elegans Hypothetical pr...    28   6.2  
Z93375-9|CAH04704.1| 2389|Caenorhabditis elegans Hypothetical pr...    28   6.2  
Z93375-8|CAB07569.1| 3375|Caenorhabditis elegans Hypothetical pr...    28   6.2  
Z93375-7|CAB07568.1| 2295|Caenorhabditis elegans Hypothetical pr...    28   6.2  
Z93375-6|CAB07567.1| 2482|Caenorhabditis elegans Hypothetical pr...    28   6.2  
L13458-1|AAA28156.1| 2481|Caenorhabditis elegans basement membra...    28   6.2  

>Z93395-7|CAH04744.1| 2389|Caenorhabditis elegans Hypothetical protein
            ZC101.2f protein.
          Length = 2389

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = +1

Query: 187  KNIYYNICLRSRVSTVVVEGGSQQ 258
            KNIY  +   SR++TV + GGS Q
Sbjct: 1971 KNIYIEVVEPSRIATVSILGGSSQ 1994


>Z93395-6|CAB07708.1| 3375|Caenorhabditis elegans Hypothetical protein
            ZC101.2e protein.
          Length = 3375

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = +1

Query: 187  KNIYYNICLRSRVSTVVVEGGSQQ 258
            KNIY  +   SR++TV + GGS Q
Sbjct: 2064 KNIYIEVVEPSRIATVSILGGSSQ 2087


>Z93395-4|CAB07707.1| 2295|Caenorhabditis elegans Hypothetical protein
            ZC101.2c protein.
          Length = 2295

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = +1

Query: 187  KNIYYNICLRSRVSTVVVEGGSQQ 258
            KNIY  +   SR++TV + GGS Q
Sbjct: 1877 KNIYIEVVEPSRIATVSILGGSSQ 1900


>Z93395-3|CAB07706.1| 2482|Caenorhabditis elegans Hypothetical protein
            ZC101.2a protein.
          Length = 2482

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = +1

Query: 187  KNIYYNICLRSRVSTVVVEGGSQQ 258
            KNIY  +   SR++TV + GGS Q
Sbjct: 2064 KNIYIEVVEPSRIATVSILGGSSQ 2087


>Z93375-9|CAH04704.1| 2389|Caenorhabditis elegans Hypothetical protein
            ZC101.2f protein.
          Length = 2389

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = +1

Query: 187  KNIYYNICLRSRVSTVVVEGGSQQ 258
            KNIY  +   SR++TV + GGS Q
Sbjct: 1971 KNIYIEVVEPSRIATVSILGGSSQ 1994


>Z93375-8|CAB07569.1| 3375|Caenorhabditis elegans Hypothetical protein
            ZC101.2e protein.
          Length = 3375

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = +1

Query: 187  KNIYYNICLRSRVSTVVVEGGSQQ 258
            KNIY  +   SR++TV + GGS Q
Sbjct: 2064 KNIYIEVVEPSRIATVSILGGSSQ 2087


>Z93375-7|CAB07568.1| 2295|Caenorhabditis elegans Hypothetical protein
            ZC101.2c protein.
          Length = 2295

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = +1

Query: 187  KNIYYNICLRSRVSTVVVEGGSQQ 258
            KNIY  +   SR++TV + GGS Q
Sbjct: 1877 KNIYIEVVEPSRIATVSILGGSSQ 1900


>Z93375-6|CAB07567.1| 2482|Caenorhabditis elegans Hypothetical protein
            ZC101.2a protein.
          Length = 2482

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = +1

Query: 187  KNIYYNICLRSRVSTVVVEGGSQQ 258
            KNIY  +   SR++TV + GGS Q
Sbjct: 2064 KNIYIEVVEPSRIATVSILGGSSQ 2087


>L13458-1|AAA28156.1| 2481|Caenorhabditis elegans basement membrane
            proteoglycan protein.
          Length = 2481

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = +1

Query: 187  KNIYYNICLRSRVSTVVVEGGSQQ 258
            KNIY  +   SR++TV + GGS Q
Sbjct: 2063 KNIYIEVVEPSRIATVSILGGSSQ 2086


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,563,269
Number of Sequences: 27780
Number of extensions: 229104
Number of successful extensions: 416
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 415
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 416
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1353389824
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)