Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10952
(652 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P36578 Cluster: 60S ribosomal protein L4; n=70; Eukaryo... 123 4e-27
UniRef50_A7E7X3 Cluster: 60S ribosomal protein L4; n=2; Scleroti... 119 5e-26
UniRef50_P09180 Cluster: 60S ribosomal protein L4; n=96; Eukaryo... 118 1e-25
UniRef50_Q4U6T4 Cluster: SL3; n=1; Brugia malayi|Rep: SL3 - Brug... 117 3e-25
UniRef50_A7AUF0 Cluster: Ribosomal protein RPL4A; n=1; Babesia b... 102 9e-21
UniRef50_Q3SEA6 Cluster: Ribosomal protein L4, putative; n=2; Ol... 100 3e-20
UniRef50_UPI0000499FAF Cluster: 60S ribosomal protein L4; n=5; E... 99 8e-20
UniRef50_Q4UES5 Cluster: 60S ribosomal subunit protein L4/L1, pu... 99 8e-20
UniRef50_Q4XUM2 Cluster: 60S ribosomal subunit protein L4/L1, pu... 96 6e-19
UniRef50_Q4FXU6 Cluster: Ribosomal protein L1a, putative; n=1; L... 95 1e-18
UniRef50_A3FPV6 Cluster: 60S ribosomal protein-like, putative; n... 95 1e-18
UniRef50_Q8SRC2 Cluster: 60S RIBOSOMAL PROTEIN L4; n=1; Encephal... 89 1e-16
UniRef50_Q98S44 Cluster: 60s ribosomal protein L1; n=2; Cryptomo... 86 8e-16
UniRef50_Q1KYM6 Cluster: RPL4; n=1; Streblomastix strix|Rep: RPL... 86 8e-16
UniRef50_Q5MGK5 Cluster: Ribosomal protein 23; n=2; Endopterygot... 82 1e-14
UniRef50_Q7R0P2 Cluster: GLP_79_45017_44067; n=1; Giardia lambli... 78 2e-13
UniRef50_A2E1Z6 Cluster: Ribosomal protein, putative; n=3; Trich... 75 1e-12
UniRef50_UPI00005A2ACC Cluster: PREDICTED: similar to ribosomal ... 75 2e-12
UniRef50_Q0U8Q3 Cluster: Putative uncharacterized protein; n=1; ... 70 4e-11
UniRef50_Q8TY91 Cluster: 50S ribosomal protein L4P; n=13; Euryar... 66 9e-10
UniRef50_Q00UB0 Cluster: Ribosomal protein RPL1/RPL2/RL4L4; n=1;... 55 1e-06
UniRef50_Q9UXA6 Cluster: 50S ribosomal protein L4P; n=3; Archaea... 54 3e-06
UniRef50_Q2NFV7 Cluster: 50S ribosomal protein L4P; n=2; Euryarc... 54 4e-06
UniRef50_Q9YFM1 Cluster: 50S ribosomal protein L4P; n=8; Archaea... 51 3e-05
UniRef50_Q8ZW51 Cluster: 50S ribosomal protein L4P; n=9; Archaea... 50 4e-05
UniRef50_Q3LWC7 Cluster: Ribosomal protein L4A; n=1; Bigelowiell... 49 1e-04
UniRef50_P12735 Cluster: 50S ribosomal protein L4P; n=1; Haloarc... 48 1e-04
UniRef50_O28355 Cluster: 50S ribosomal protein L4P; n=9; Euryarc... 48 3e-04
UniRef50_UPI00005A24EF Cluster: PREDICTED: similar to ribosomal ... 47 3e-04
UniRef50_A7QKL2 Cluster: Chromosome chr2 scaffold_113, whole gen... 45 0.001
UniRef50_A0RVX5 Cluster: Ribosomal protein L4; n=2; Thermoprotei... 45 0.002
UniRef50_A7R5H8 Cluster: Chromosome undetermined scaffold_974, w... 44 0.003
UniRef50_Q9HIR0 Cluster: 50S ribosomal protein L4P; n=4; Thermop... 43 0.006
UniRef50_Q673S8 Cluster: Ribosomal protein L4; n=3; cellular org... 43 0.007
UniRef50_P60847 Cluster: 50S ribosomal protein L4P; n=1; Nanoarc... 40 0.039
UniRef50_Q4FXU7 Cluster: Putative uncharacterized protein; n=2; ... 37 0.36
UniRef50_A7Q400 Cluster: Chromosome chr13 scaffold_48, whole gen... 37 0.48
UniRef50_A7S7R2 Cluster: Predicted protein; n=1; Nematostella ve... 36 0.64
UniRef50_Q95YH2 Cluster: Ribosomal protein L4; n=1; Paramecium c... 36 1.1
UniRef50_UPI00015B4B32 Cluster: PREDICTED: hypothetical protein;... 35 1.9
UniRef50_A3LGX4 Cluster: Putative uncharacterized protein; n=1; ... 34 2.6
UniRef50_Q7F729 Cluster: OSJNBa0004B13.22 protein; n=2; Oryza sa... 34 2.6
UniRef50_Q9U2L6 Cluster: Putative uncharacterized protein sre-16... 34 2.6
UniRef50_Q8S0V8 Cluster: Splicing coactivator subunit-like prote... 34 3.4
UniRef50_Q4WUX5 Cluster: Sensor histidine kinase/response regula... 34 3.4
UniRef50_A0W7C0 Cluster: Diguanylate cyclase/phosphodiesterase w... 33 4.5
UniRef50_Q69RQ6 Cluster: Putative uncharacterized protein OSJNBb... 33 4.5
UniRef50_Q0DYA2 Cluster: Os02g0706600 protein; n=5; Oryza sativa... 33 4.5
UniRef50_Q0D693 Cluster: Os07g0499800 protein; n=1; Oryza sativa... 33 4.5
UniRef50_Q5KN72 Cluster: Uv excision repair protein rhp23, putat... 33 4.5
UniRef50_UPI0000E1F6E9 Cluster: PREDICTED: hypothetical protein;... 33 5.9
UniRef50_O00257 Cluster: E3 SUMO-protein ligase CBX4; n=13; Euth... 33 5.9
UniRef50_Q0S4B0 Cluster: Putative uncharacterized protein; n=2; ... 33 7.8
>UniRef50_P36578 Cluster: 60S ribosomal protein L4; n=70;
Eukaryota|Rep: 60S ribosomal protein L4 - Homo sapiens
(Human)
Length = 427
Score = 123 bits (296), Expect = 4e-27
Identities = 58/80 (72%), Positives = 66/80 (82%)
Frame = +2
Query: 17 HQEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGT 196
+ EK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AGHQTSAESWGT
Sbjct: 11 YSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAGHQTSAESWGT 69
Query: 197 GRAVARIPRVRGGGTHRSGR 256
GRAVARIPRVRGGGTHRSG+
Sbjct: 70 GRAVARIPRVRGGGTHRSGQ 89
Score = 74.1 bits (174), Expect = 3e-12
Identities = 32/42 (76%), Positives = 38/42 (90%)
Frame = +2
Query: 509 KAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKGSG 634
KAW+DI KVY SQR+RAGKGKMRNRRRIQR+GP II+N+ +G
Sbjct: 175 KAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNEDNG 216
Score = 63.3 bits (147), Expect = 5e-09
Identities = 27/49 (55%), Positives = 41/49 (83%)
Frame = +3
Query: 366 SVAATGVPALVQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLR 512
++AA+ +PALV ++GH IE++PELPLVV DKV+ KTK+AV+ L++L+
Sbjct: 127 ALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEAVLLLKKLK 175
Score = 58.4 bits (135), Expect = 1e-07
Identities = 22/23 (95%), Positives = 22/23 (95%)
Frame = +1
Query: 256 GAFGNMCRGGRMFAPTKPWRRWH 324
GAFGNMCRGGRMFAPTK WRRWH
Sbjct: 90 GAFGNMCRGGRMFAPTKTWRRWH 112
>UniRef50_A7E7X3 Cluster: 60S ribosomal protein L4; n=2;
Sclerotiniaceae|Rep: 60S ribosomal protein L4 -
Sclerotinia sclerotiorum 1980
Length = 373
Score = 119 bits (287), Expect = 5e-26
Identities = 53/74 (71%), Positives = 60/74 (81%)
Frame = +2
Query: 35 TVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVAR 214
T G PLP VF +PIRPD+V VH M+KN RQPY VS++AGHQTSAESWGTGRAVAR
Sbjct: 15 TATGTTIPLPKVFTSPIRPDIVQTVHTGMAKNKRQPYAVSEKAGHQTSAESWGTGRAVAR 74
Query: 215 IPRVRGGGTHRSGR 256
IPRV GGGTHR+G+
Sbjct: 75 IPRVSGGGTHRAGQ 88
Score = 52.0 bits (119), Expect = 1e-05
Identities = 19/22 (86%), Positives = 20/22 (90%)
Frame = +1
Query: 259 AFGNMCRGGRMFAPTKPWRRWH 324
AFGNMCR GRMFAPTK WR+WH
Sbjct: 90 AFGNMCRSGRMFAPTKVWRKWH 111
Score = 48.0 bits (109), Expect = 2e-04
Identities = 20/37 (54%), Positives = 29/37 (78%)
Frame = +2
Query: 512 AWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFN 622
A D+ KV S++LRAGKGK+R RR QR+GPL++++
Sbjct: 178 ALKDVEKVKDSRKLRAGKGKLRGRRHRQRRGPLVVYD 214
Score = 40.3 bits (90), Expect = 0.039
Identities = 18/34 (52%), Positives = 27/34 (79%)
Frame = +3
Query: 366 SVAATGVPALVQARGHIIEKIPELPLVVADKVQE 467
++AA+GVPAL+ ARGH I ++ E+PLV+ +V E
Sbjct: 126 ALAASGVPALLFARGHQISEVAEVPLVINSEVFE 159
>UniRef50_P09180 Cluster: 60S ribosomal protein L4; n=96;
Eukaryota|Rep: 60S ribosomal protein L4 - Drosophila
melanogaster (Fruit fly)
Length = 401
Score = 118 bits (284), Expect = 1e-25
Identities = 55/80 (68%), Positives = 65/80 (81%)
Frame = +2
Query: 17 HQEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGT 196
+ EK+E + LP VFKAPIRPD+VN+VH + +N+RQ Y VS+ AGHQTSAESWGT
Sbjct: 13 YTEKNEPAKDKNICLPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVSELAGHQTSAESWGT 72
Query: 197 GRAVARIPRVRGGGTHRSGR 256
GRAVARIPRVRGGGTHRSG+
Sbjct: 73 GRAVARIPRVRGGGTHRSGQ 92
Score = 75.4 bits (177), Expect = 1e-12
Identities = 33/52 (63%), Positives = 46/52 (88%)
Frame = +3
Query: 357 LGGSVAATGVPALVQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLR 512
L ++AA+GVPALVQ++GH+I+ + E PLVV+D+VQ++ KTKQAVIFLRRL+
Sbjct: 127 LVSAIAASGVPALVQSKGHVIDGVSEFPLVVSDEVQKVQKTKQAVIFLRRLK 178
Score = 66.1 bits (154), Expect = 7e-10
Identities = 27/42 (64%), Positives = 35/42 (83%)
Frame = +2
Query: 509 KAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKGSG 634
K W+DI KVYKSQR RAG+G MR+RRRI R+GPL++++K G
Sbjct: 178 KIWADIQKVYKSQRFRAGRGTMRDRRRIARRGPLVVYDKDEG 219
Score = 54.4 bits (125), Expect = 2e-06
Identities = 21/23 (91%), Positives = 22/23 (95%)
Frame = +1
Query: 256 GAFGNMCRGGRMFAPTKPWRRWH 324
GAFGNMCRGGRMFAPTK +RRWH
Sbjct: 93 GAFGNMCRGGRMFAPTKTFRRWH 115
>UniRef50_Q4U6T4 Cluster: SL3; n=1; Brugia malayi|Rep: SL3 - Brugia
malayi (Filarial nematode worm)
Length = 306
Score = 117 bits (281), Expect = 3e-25
Identities = 55/80 (68%), Positives = 64/80 (80%)
Frame = +2
Query: 17 HQEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGT 196
+ +KSE + LP VF+AP+RPD+V+ VH + KN RQPY VS EAGHQTSAESWGT
Sbjct: 128 YNDKSEPTDTQIR-LPGVFRAPLRPDIVSFVHDQIRKNKRQPYAVSVEAGHQTSAESWGT 186
Query: 197 GRAVARIPRVRGGGTHRSGR 256
GRAVARIPRVRGGGTHRSG+
Sbjct: 187 GRAVARIPRVRGGGTHRSGQ 206
Score = 54.0 bits (124), Expect = 3e-06
Identities = 21/23 (91%), Positives = 22/23 (95%)
Frame = +1
Query: 256 GAFGNMCRGGRMFAPTKPWRRWH 324
GAFGNMCRGGRMFAPTK +RRWH
Sbjct: 207 GAFGNMCRGGRMFAPTKVFRRWH 229
>UniRef50_A7AUF0 Cluster: Ribosomal protein RPL4A; n=1; Babesia
bovis|Rep: Ribosomal protein RPL4A - Babesia bovis
Length = 360
Score = 102 bits (244), Expect = 9e-21
Identities = 45/66 (68%), Positives = 55/66 (83%)
Frame = +2
Query: 59 LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGG 238
+P VF AP+R DLV VH +MSKN RQ Y VSK +G+QTSA SWGTGRA+AR+PRV+GGG
Sbjct: 23 MPKVFSAPLRLDLVRIVHTNMSKNRRQAYAVSKMSGYQTSARSWGTGRAMARVPRVKGGG 82
Query: 239 THRSGR 256
THR+G+
Sbjct: 83 THRAGQ 88
Score = 52.0 bits (119), Expect = 1e-05
Identities = 25/54 (46%), Positives = 36/54 (66%)
Frame = +3
Query: 357 LGGSVAATGVPALVQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLRHG 518
L ++AAT V +V +RGH IE + E+P+VV D +++INKTK AV L + G
Sbjct: 123 LASALAATAVVPVVMSRGHRIEALREVPMVVDDAIEQINKTKDAVKLLETIGLG 176
Score = 42.3 bits (95), Expect = 0.010
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = +1
Query: 259 AFGNMCRGGRMFAPTKPWRRWH 324
A+ N CR G M+APT+ WRRWH
Sbjct: 90 AYANFCRAGGMYAPTRVWRRWH 111
>UniRef50_Q3SEA6 Cluster: Ribosomal protein L4, putative; n=2;
Oligohymenophorea|Rep: Ribosomal protein L4, putative -
Paramecium tetraurelia
Length = 406
Score = 100 bits (240), Expect = 3e-20
Identities = 45/67 (67%), Positives = 55/67 (82%)
Frame = +2
Query: 56 PLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGG 235
PLP VF+ PIRPD+V+ VH +++KN RQ + V+ +AG Q SAESWGTGRAVARIPRV G
Sbjct: 24 PLPAVFQTPIRPDIVSFVHTNIAKNRRQAHAVNPQAGMQHSAESWGTGRAVARIPRVSGS 83
Query: 236 GTHRSGR 256
GTHRSG+
Sbjct: 84 GTHRSGQ 90
Score = 56.4 bits (130), Expect = 6e-07
Identities = 25/47 (53%), Positives = 35/47 (74%)
Frame = +3
Query: 366 SVAATGVPALVQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRR 506
+VAATG+ LV ARGH I ++P++PLVV DK++ KT A+ FL+R
Sbjct: 128 AVAATGIVPLVLARGHRISQVPQIPLVVEDKIESYEKTTDALNFLKR 174
Score = 43.6 bits (98), Expect = 0.004
Identities = 19/27 (70%), Positives = 19/27 (70%), Gaps = 2/27 (7%)
Frame = +1
Query: 250 RSG--AFGNMCRGGRMFAPTKPWRRWH 324
RSG AFGN CR GRM P K WRRWH
Sbjct: 87 RSGQAAFGNQCRKGRMSLPIKVWRRWH 113
Score = 34.3 bits (75), Expect = 2.6
Identities = 14/36 (38%), Positives = 24/36 (66%)
Frame = +2
Query: 512 AWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIF 619
A+ D+ KV ++ +RAG K R ++ RKGPL+++
Sbjct: 177 AFEDVQKVVSTKVVRAGISKQRGKKYRVRKGPLVVY 212
>UniRef50_UPI0000499FAF Cluster: 60S ribosomal protein L4; n=5;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L4 - Entamoeba histolytica HM-1:IMSS
Length = 431
Score = 99.1 bits (236), Expect = 8e-20
Identities = 72/192 (37%), Positives = 99/192 (51%), Gaps = 5/192 (2%)
Frame = +2
Query: 59 LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGG 238
LP VF APIR D+V+ V+ + SKN+RQP VS +AG Q SA SWGTGRAVARIPR+ G G
Sbjct: 24 LPAVFLAPIRGDVVHFVYRNQSKNTRQPEGVSTKAGKQHSAISWGTGRAVARIPRISGSG 83
Query: 239 THRSGRXXXXXXXXXXXXXXXRSP-GGVGTVASTSDSGERPWRQRCCYRRPS--ARSG*R 409
SGR SP + R + C + A R
Sbjct: 84 ---SGRNGQGAFGNMTRKGHMFSPLKNFRKWQRKTPKQMRRFAVASCIAASAVPALVSAR 140
Query: 410 THY*KDSRASPGC--SRQSPGDQQDQTGCHLPEAPKAWSDILKVYKSQRLRAGKGKMRNR 583
H+ P S+ ++ + +L + A+SD+LKV S+ +RAG+GKMR R
Sbjct: 141 GHHIAGVPQIPLVVNSKSISVIKKTKQAVYLLKKINAYSDVLKVIASKTVRAGQGKMRGR 200
Query: 584 RRIQRKGPLIIF 619
+ +RKGPL+++
Sbjct: 201 KIKERKGPLVVY 212
Score = 53.6 bits (123), Expect = 4e-06
Identities = 26/48 (54%), Positives = 35/48 (72%), Gaps = 1/48 (2%)
Frame = +3
Query: 369 VAATGVPALVQARGHIIEKIPELPLVVADK-VQEINKTKQAVIFLRRL 509
+AA+ VPALV ARGH I +P++PLVV K + I KTKQAV L+++
Sbjct: 128 IAASAVPALVSARGHHIAGVPQIPLVVNSKSISVIKKTKQAVYLLKKI 175
Score = 36.7 bits (81), Expect = 0.48
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = +1
Query: 256 GAFGNMCRGGRMFAPTKPWRRW 321
GAFGNM R G MF+P K +R+W
Sbjct: 90 GAFGNMTRKGHMFSPLKNFRKW 111
>UniRef50_Q4UES5 Cluster: 60S ribosomal subunit protein L4/L1,
putative; n=2; Theileria|Rep: 60S ribosomal subunit
protein L4/L1, putative - Theileria annulata
Length = 426
Score = 99.1 bits (236), Expect = 8e-20
Identities = 42/66 (63%), Positives = 54/66 (81%)
Frame = +2
Query: 59 LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGG 238
+P VF P+R DLV+ VH +MSKN RQ Y +S+ +G+QTSA SWGTGRA++R PRV+GGG
Sbjct: 23 MPRVFSTPLRSDLVHYVHTNMSKNKRQAYAISRMSGYQTSARSWGTGRALSRTPRVKGGG 82
Query: 239 THRSGR 256
THRSG+
Sbjct: 83 THRSGQ 88
Score = 50.0 bits (114), Expect = 5e-05
Identities = 24/51 (47%), Positives = 33/51 (64%)
Frame = +3
Query: 357 LGGSVAATGVPALVQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRL 509
L SVAAT LV +RGH +E +PELPLV+ D ++ + KT+ AV L +
Sbjct: 123 LAVSVAATASVPLVMSRGHRVESVPELPLVLDDTMETLTKTRDAVELLNSM 173
Score = 42.7 bits (96), Expect = 0.007
Identities = 17/27 (62%), Positives = 19/27 (70%), Gaps = 2/27 (7%)
Frame = +1
Query: 250 RSG--AFGNMCRGGRMFAPTKPWRRWH 324
RSG A+ N CR G MFAPT+ WR WH
Sbjct: 85 RSGQAAYANFCRAGGMFAPTRTWRHWH 111
>UniRef50_Q4XUM2 Cluster: 60S ribosomal subunit protein L4/L1,
putative; n=5; Plasmodium|Rep: 60S ribosomal subunit
protein L4/L1, putative - Plasmodium chabaudi
Length = 411
Score = 96.3 bits (229), Expect = 6e-19
Identities = 43/66 (65%), Positives = 52/66 (78%)
Frame = +2
Query: 59 LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGG 238
+P VF+ PIR DL+ + +MSKN R PY V AG++TSAESWGTGRAVARIPRV GGG
Sbjct: 24 IPVVFQTPIRHDLIEYIFSNMSKNIRHPYAVKLGAGYETSAESWGTGRAVARIPRVPGGG 83
Query: 239 THRSGR 256
THR+G+
Sbjct: 84 THRAGQ 89
Score = 48.8 bits (111), Expect = 1e-04
Identities = 21/45 (46%), Positives = 33/45 (73%)
Frame = +3
Query: 366 SVAATGVPALVQARGHIIEKIPELPLVVADKVQEINKTKQAVIFL 500
S+AA+G+ +LV ARGH I + E+PLV ++ ++ + KTK A+ FL
Sbjct: 127 SIAASGITSLVLARGHRISNLKEVPLVASNDIESMQKTKDALKFL 171
Score = 46.8 bits (106), Expect = 5e-04
Identities = 18/21 (85%), Positives = 18/21 (85%)
Frame = +1
Query: 259 AFGNMCRGGRMFAPTKPWRRW 321
AFGNMCRGG MF PTK WRRW
Sbjct: 91 AFGNMCRGGGMFNPTKIWRRW 111
Score = 38.7 bits (86), Expect = 0.12
Identities = 18/38 (47%), Positives = 26/38 (68%)
Frame = +2
Query: 521 DILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKGSG 634
++ ++ KS +LRA GKMRNR+ GPLII++ SG
Sbjct: 179 EVNRLIKSXKLRARXGKMRNRKYKISNGPLIIYSXDSG 216
>UniRef50_Q4FXU6 Cluster: Ribosomal protein L1a, putative; n=1;
Leishmania major strain Friedlin|Rep: Ribosomal protein
L1a, putative - Leishmania major strain Friedlin
Length = 432
Score = 95.1 bits (226), Expect = 1e-18
Identities = 46/79 (58%), Positives = 56/79 (70%)
Frame = +2
Query: 17 HQEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGT 196
+ S++V G PLP VF APIR D+V VH +M+KNSRQ Y V++ +G SA SWGT
Sbjct: 10 YSASSDSVVGTC-PLPAVFTAPIRSDIVKFVHTNMAKNSRQAYAVNRLSGMNHSAHSWGT 68
Query: 197 GRAVARIPRVRGGGTHRSG 253
GRAVARIPR+ GGGT SG
Sbjct: 69 GRAVARIPRISGGGTSTSG 87
Score = 56.0 bits (129), Expect = 7e-07
Identities = 24/48 (50%), Positives = 36/48 (75%)
Frame = +3
Query: 366 SVAATGVPALVQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRL 509
++AA+ VP+LV +RGH I +PE+PLVV D +Q KTK+A+ FL+ +
Sbjct: 126 ALAASSVPSLVMSRGHQIGNVPEVPLVVEDSIQGYEKTKEAMAFLKAI 173
Score = 54.0 bits (124), Expect = 3e-06
Identities = 21/24 (87%), Positives = 23/24 (95%)
Frame = +1
Query: 253 SGAFGNMCRGGRMFAPTKPWRRWH 324
+GAFGNMCRGGRMFAPTK +RRWH
Sbjct: 88 AGAFGNMCRGGRMFAPTKIFRRWH 111
Score = 46.0 bits (104), Expect = 8e-04
Identities = 21/46 (45%), Positives = 33/46 (71%), Gaps = 2/46 (4%)
Frame = +2
Query: 500 EAPKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIF--NKGS 631
+A A D+ +V S+ +RAG+GKMRNRR + R+GP+++ NKG+
Sbjct: 171 KAIAAIDDVNRVNDSREIRAGRGKMRNRRYVARRGPMLVMPNNKGT 216
>UniRef50_A3FPV6 Cluster: 60S ribosomal protein-like, putative; n=4;
Cryptosporidium|Rep: 60S ribosomal protein-like,
putative - Cryptosporidium parvum Iowa II
Length = 394
Score = 95.1 bits (226), Expect = 1e-18
Identities = 46/67 (68%), Positives = 51/67 (76%)
Frame = +2
Query: 56 PLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGG 235
PLP VF +P+R DLV V +MSKN RQ Y VS +AGHQ SAESWGTGRAVARIPRV
Sbjct: 24 PLPTVFVSPLRHDLVRYVFTNMSKNKRQAYGVSTKAGHQHSAESWGTGRAVARIPRVSAS 83
Query: 236 GTHRSGR 256
GT RSG+
Sbjct: 84 GTSRSGQ 90
Score = 64.5 bits (150), Expect = 2e-09
Identities = 28/55 (50%), Positives = 39/55 (70%)
Frame = +3
Query: 357 LGGSVAATGVPALVQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLRHGL 521
+ ++AATG P+LV ARGH I +PELPLV+++++Q INKT AV F + GL
Sbjct: 125 VAAAIAATGCPSLVMARGHRINNVPELPLVISNEIQNINKTSTAVEFFKNFGKGL 179
Score = 45.6 bits (103), Expect = 0.001
Identities = 17/23 (73%), Positives = 20/23 (86%)
Frame = +1
Query: 256 GAFGNMCRGGRMFAPTKPWRRWH 324
GAFGNMCRGG MF+P K +RR+H
Sbjct: 91 GAFGNMCRGGHMFSPNKTYRRFH 113
Score = 41.1 bits (92), Expect = 0.022
Identities = 16/38 (42%), Positives = 27/38 (71%)
Frame = +2
Query: 521 DILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKGSG 634
++ ++ S +R GKGKMRNRRR+ GPL+++ + +G
Sbjct: 182 EMKRIESSIAIRCGKGKMRNRRRVCAVGPLVVYAEDNG 219
>UniRef50_Q8SRC2 Cluster: 60S RIBOSOMAL PROTEIN L4; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L4 -
Encephalitozoon cuniculi
Length = 335
Score = 88.6 bits (210), Expect = 1e-16
Identities = 41/66 (62%), Positives = 48/66 (72%)
Frame = +2
Query: 59 LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGG 238
LP VF PIR DLV + +RQPY VSK AG Q SAESWGTGRA+AR+PRV+GGG
Sbjct: 21 LPEVFSVPIRQDLVLKTYSLYRMKTRQPYAVSKNAGMQHSAESWGTGRAIARVPRVKGGG 80
Query: 239 THRSGR 256
T R+G+
Sbjct: 81 TRRAGQ 86
Score = 46.8 bits (106), Expect = 5e-04
Identities = 22/48 (45%), Positives = 32/48 (66%)
Frame = +3
Query: 366 SVAATGVPALVQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRL 509
+VAA+ +LV+ARGH I + LP++V+D + + KTK AV LR L
Sbjct: 124 AVAASAQASLVEARGHRISDVKMLPIIVSDDIAKARKTKDAVEILRNL 171
Score = 43.6 bits (98), Expect = 0.004
Identities = 20/37 (54%), Positives = 27/37 (72%)
Frame = +2
Query: 521 DILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKGS 631
++ +V KS+ +R GKGKMRNRR QRKG LI+ + S
Sbjct: 176 ELKRVEKSRGVRCGKGKMRNRRYTQRKGILIVHGESS 212
Score = 36.7 bits (81), Expect = 0.48
Identities = 15/22 (68%), Positives = 15/22 (68%)
Frame = +1
Query: 256 GAFGNMCRGGRMFAPTKPWRRW 321
GAF N CR GRM PTK RRW
Sbjct: 87 GAFANFCRKGRMAHPTKTHRRW 108
>UniRef50_Q98S44 Cluster: 60s ribosomal protein L1; n=2;
Cryptomonadaceae|Rep: 60s ribosomal protein L1 -
Guillardia theta (Cryptomonas phi)
Length = 255
Score = 85.8 bits (203), Expect = 8e-16
Identities = 41/66 (62%), Positives = 48/66 (72%)
Frame = +2
Query: 59 LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGG 238
+P VF + IR D+V VH +M KN RQ Y VS AG TSA SWGTGRAV+R+PRV G G
Sbjct: 19 IPKVFFSKIRVDIVRFVHKNMCKNKRQVYAVSSTAGMGTSAVSWGTGRAVSRVPRVPGSG 78
Query: 239 THRSGR 256
THRSG+
Sbjct: 79 THRSGQ 84
Score = 43.2 bits (97), Expect = 0.006
Identities = 15/23 (65%), Positives = 17/23 (73%)
Frame = +1
Query: 256 GAFGNMCRGGRMFAPTKPWRRWH 324
GA N CRGGR+F PT WR+WH
Sbjct: 85 GAIANFCRGGRIFNPTTIWRKWH 107
Score = 42.3 bits (95), Expect = 0.010
Identities = 15/54 (27%), Positives = 36/54 (66%)
Frame = +3
Query: 348 ESGLGGSVAATGVPALVQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRL 509
+S + ++A++ + +++ +RG+ ++ IPE+P V+ D +++I KT+ + L L
Sbjct: 116 KSAIFSAIASSSIVSIIVSRGYRVKTIPEIPFVIEDSIEKIPKTRDLIKILTTL 169
Score = 35.9 bits (79), Expect = 0.84
Identities = 15/34 (44%), Positives = 25/34 (73%)
Frame = +2
Query: 518 SDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIF 619
+ I++ ++L++GKGKMRNRR + GPL++F
Sbjct: 172 NSIVRNKLKRKLKSGKGKMRNRRFKKPTGPLLVF 205
>UniRef50_Q1KYM6 Cluster: RPL4; n=1; Streblomastix strix|Rep: RPL4 -
Streblomastix strix
Length = 492
Score = 85.8 bits (203), Expect = 8e-16
Identities = 39/67 (58%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Frame = +2
Query: 59 LPFVFK-APIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGG 235
+P V + +PIRPD+V+ VH++++KN RQP+ AGHQ SAESWGTGRAVAR+PR+ G
Sbjct: 23 VPSVIRYSPIRPDVVHFVHMNLAKNERQPFGRYYLAGHQHSAESWGTGRAVARVPRISGS 82
Query: 236 GTHRSGR 256
GT R+G+
Sbjct: 83 GTSRNGQ 89
Score = 58.4 bits (135), Expect = 1e-07
Identities = 27/49 (55%), Positives = 38/49 (77%)
Frame = +3
Query: 366 SVAATGVPALVQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLR 512
++AA+ P+LV ARGH I+ +PELPLVV+D V++I KTK+AV L L+
Sbjct: 127 AIAASSNPSLVLARGHKIDNVPELPLVVSDDVEQIKKTKEAVKVLAALK 175
Score = 42.3 bits (95), Expect = 0.010
Identities = 20/44 (45%), Positives = 28/44 (63%)
Frame = +2
Query: 503 APKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKGSG 634
A KA D+ +S+R+R G GK RNRR QR+G LI+ ++ G
Sbjct: 173 ALKASDDVKHSAESKRIRVGSGKARNRRYTQRRGVLIVHDQNEG 216
Score = 40.3 bits (90), Expect = 0.039
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = +1
Query: 259 AFGNMCRGGRMFAPTKPWRRWH 324
AF N RGG M++P K WRRWH
Sbjct: 91 AFANSARGGHMYSPLKVWRRWH 112
>UniRef50_Q5MGK5 Cluster: Ribosomal protein 23; n=2;
Endopterygota|Rep: Ribosomal protein 23 - Lonomia
obliqua (Moth)
Length = 274
Score = 82.2 bits (194), Expect = 1e-14
Identities = 36/42 (85%), Positives = 39/42 (92%)
Frame = +2
Query: 509 KAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKGSG 634
KAWSD+LKVYKSQRLRAGKGKMRNRRR+ RKGPLII+NK G
Sbjct: 40 KAWSDVLKVYKSQRLRAGKGKMRNRRRLHRKGPLIIYNKDQG 81
Score = 65.3 bits (152), Expect = 1e-09
Identities = 34/82 (41%), Positives = 47/82 (57%)
Frame = +3
Query: 405 RGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLRHGLISLRCTSLSVFVLVRVKCATX 584
RG++++ + E+PLVV+DK+QEINKTKQAVIFLRR++ L+ + K
Sbjct: 5 RGYVVDNVSEIPLVVSDKIQEINKTKQAVIFLRRIKAWSDVLKVYKSQRLRAGKGKMRNR 64
Query: 585 XXXXXXXXXXXXTKDQGLTRAF 650
KDQGLTR+F
Sbjct: 65 RRLHRKGPLIIYNKDQGLTRSF 86
>UniRef50_Q7R0P2 Cluster: GLP_79_45017_44067; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_79_45017_44067 - Giardia lamblia
ATCC 50803
Length = 316
Score = 78.2 bits (184), Expect = 2e-13
Identities = 36/65 (55%), Positives = 43/65 (66%)
Frame = +2
Query: 41 QGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIP 220
Q A P P VF P+RPD++N VH + K R PY VS+ AG Q +A SWG GRAVAR+P
Sbjct: 14 QVAELPRPKVFNVPLRPDIINFVHTQLRKCLRTPYAVSRYAGVQCTAHSWGPGRAVARLP 73
Query: 221 RVRGG 235
R GG
Sbjct: 74 RKHGG 78
Score = 48.0 bits (109), Expect = 2e-04
Identities = 20/34 (58%), Positives = 27/34 (79%)
Frame = +2
Query: 521 DILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFN 622
D+ + S+ +RAG+GKMRNRR I RKGPL+I+N
Sbjct: 167 DVERCKDSRHIRAGRGKMRNRRYITRKGPLVIYN 200
Score = 39.1 bits (87), Expect = 0.090
Identities = 19/49 (38%), Positives = 30/49 (61%)
Frame = +3
Query: 357 LGGSVAATGVPALVQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLR 503
+ ++AA+ ALV+ARGH I +P +PLVV + KTK A+ ++
Sbjct: 114 VASALAASANAALVEARGHRIADVPSIPLVV--DTDNVTKTKDALAIIK 160
>UniRef50_A2E1Z6 Cluster: Ribosomal protein, putative; n=3;
Trichomonas vaginalis G3|Rep: Ribosomal protein,
putative - Trichomonas vaginalis G3
Length = 370
Score = 75.4 bits (177), Expect = 1e-12
Identities = 33/66 (50%), Positives = 49/66 (74%)
Frame = +2
Query: 59 LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGG 238
LP VF PIR ++V +V+V+++KN++QP+ AG + SA SWGTGRA A +PRV G G
Sbjct: 21 LPKVFDTPIRAEVVKEVYVNLAKNAQQPHANDPMAGKKVSAISWGTGRAKACVPRVNGSG 80
Query: 239 THRSGR 256
++R+G+
Sbjct: 81 SNRNGQ 86
Score = 58.8 bits (136), Expect = 1e-07
Identities = 29/62 (46%), Positives = 43/62 (69%)
Frame = +3
Query: 324 PSRQPPTAESGLGGSVAATGVPALVQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLR 503
PSRQ A + ++AAT V LVQARGH++ ++ E+P+VV D VQEI +T+ AV L+
Sbjct: 113 PSRQRKFA---IASAIAATAVVPLVQARGHVLGEVKEVPIVVVDAVQEIKRTRDAVELLK 169
Query: 504 RL 509
++
Sbjct: 170 KV 171
Score = 33.1 bits (72), Expect = 5.9
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +2
Query: 515 WSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKGSG 634
+ D+ +V R+ KGK R +KGPL+I+N+ G
Sbjct: 174 YGDVQRVLDGSVHRSSKGKFRRAAYKTKKGPLVIYNEDKG 213
>UniRef50_UPI00005A2ACC Cluster: PREDICTED: similar to ribosomal
protein L4; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L4 - Canis familiaris
Length = 248
Score = 74.5 bits (175), Expect = 2e-12
Identities = 33/49 (67%), Positives = 39/49 (79%)
Frame = +2
Query: 92 DLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGG 238
D+VN VH ++ KN QPY VS+ AG+QTSAESWGTGRA +PRVRGGG
Sbjct: 25 DVVNFVHSNLHKNDSQPYAVSESAGYQTSAESWGTGRARGPMPRVRGGG 73
Score = 68.1 bits (159), Expect = 2e-10
Identities = 30/42 (71%), Positives = 36/42 (85%)
Frame = +2
Query: 509 KAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKGSG 634
KAW+DI KVY SQR+RAGKGKMRNRR IQR+G II+N+ +G
Sbjct: 116 KAWNDIKKVYASQRMRAGKGKMRNRRPIQRRGSCIIYNEDNG 157
>UniRef50_Q0U8Q3 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 349
Score = 70.1 bits (164), Expect = 4e-11
Identities = 30/44 (68%), Positives = 37/44 (84%)
Frame = +2
Query: 125 KNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGR 256
++++ V +AGHQTSAESWGTGRAVARIPRV GGGTHR+G+
Sbjct: 22 ESTKDTLTVPNKAGHQTSAESWGTGRAVARIPRVSGGGTHRAGQ 65
Score = 52.0 bits (119), Expect = 1e-05
Identities = 19/22 (86%), Positives = 20/22 (90%)
Frame = +1
Query: 259 AFGNMCRGGRMFAPTKPWRRWH 324
AFGNMCR GRMFAPTK WR+WH
Sbjct: 67 AFGNMCRSGRMFAPTKVWRKWH 88
Score = 48.8 bits (111), Expect = 1e-04
Identities = 23/43 (53%), Positives = 31/43 (72%)
Frame = +2
Query: 494 LPEAPKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFN 622
L +A A +D K S++LRAGKGK+R RR QR+GPL+I+N
Sbjct: 149 LLKAVGAGADCEKAKNSRKLRAGKGKLRGRRHKQRRGPLVIYN 191
Score = 43.6 bits (98), Expect = 0.004
Identities = 22/54 (40%), Positives = 33/54 (61%), Gaps = 3/54 (5%)
Frame = +3
Query: 366 SVAATGVPALVQARGHIIEKIPELPLVVADKV---QEINKTKQAVIFLRRLRHG 518
++AA+G PAL+ ARGH + +PE+PLV++ I KT AV L+ + G
Sbjct: 103 ALAASGSPALLMARGHNVSTVPEVPLVISSTAFADAAIRKTSAAVALLKAVGAG 156
>UniRef50_Q8TY91 Cluster: 50S ribosomal protein L4P; n=13;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Methanopyrus kandleri
Length = 260
Score = 65.7 bits (153), Expect = 9e-10
Identities = 30/66 (45%), Positives = 39/66 (59%)
Frame = +2
Query: 59 LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGG 238
LP F+ P+R DL+ ++ N RQPY AG +TSAESWG G VA +PRV+G
Sbjct: 18 LPSFFEEPVRKDLIRRAVLAAQANRRQPYGTDPRAGFRTSAESWGAGHGVAMVPRVKGRR 77
Query: 239 THRSGR 256
+GR
Sbjct: 78 HPAAGR 83
Score = 48.8 bits (111), Expect = 1e-04
Identities = 19/51 (37%), Positives = 34/51 (66%)
Frame = +3
Query: 351 SGLGGSVAATGVPALVQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLR 503
+ L ++AAT P V+ RGH+I+ +P LP+VV D+++ +NK ++ F +
Sbjct: 116 AALRSALAATAKPEFVKERGHVIDDVPHLPVVVVDELKSLNKAREVREFFK 166
Score = 41.1 bits (92), Expect = 0.022
Identities = 16/40 (40%), Positives = 27/40 (67%)
Frame = +2
Query: 515 WSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKGSG 634
W+D+ + ++R+RAGKGK R RR ++ K LI+ ++ G
Sbjct: 171 WADVERAKSNRRIRAGKGKRRGRRYVKPKSVLIVVDEDEG 210
>UniRef50_Q00UB0 Cluster: Ribosomal protein RPL1/RPL2/RL4L4; n=1;
Ostreococcus tauri|Rep: Ribosomal protein
RPL1/RPL2/RL4L4 - Ostreococcus tauri
Length = 404
Score = 55.2 bits (127), Expect = 1e-06
Identities = 22/41 (53%), Positives = 35/41 (85%)
Frame = +2
Query: 512 AWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKGSG 634
A++DI KV S+ +R+GKGKMRNRR +QR+GPL+++++ +G
Sbjct: 179 AYADIEKVKASRNVRSGKGKMRNRRYVQRRGPLVVYSEDNG 219
Score = 53.6 bits (123), Expect = 4e-06
Identities = 24/48 (50%), Positives = 35/48 (72%)
Frame = +3
Query: 366 SVAATGVPALVQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRL 509
++AA+ VP+L+ ARGH +E +PE+PLVV D I KT +AV L++L
Sbjct: 130 AIAASAVPSLLLARGHRVEGVPEVPLVVDDSASSIKKTAKAVELLKQL 177
Score = 35.9 bits (79), Expect = 0.84
Identities = 15/29 (51%), Positives = 21/29 (72%)
Frame = +2
Query: 44 GAAKPLPFVFKAPIRPDLVNDVHVSMSKN 130
GA+ +P VF +PIR D+VN VH ++KN
Sbjct: 15 GASCAMPEVFLSPIRADIVNAVHTGLAKN 43
>UniRef50_Q9UXA6 Cluster: 50S ribosomal protein L4P; n=3;
Archaea|Rep: 50S ribosomal protein L4P - Sulfolobus
solfataricus
Length = 267
Score = 54.0 bits (124), Expect = 3e-06
Identities = 25/60 (41%), Positives = 36/60 (60%)
Frame = +2
Query: 59 LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGG 238
LP +F P+R DL+ V ++ +S QP AG +TSAES+G +AR+PRV+ G
Sbjct: 25 LPIIFSFPVRKDLIRRVFIAEFTHSLQPKGRDPNAGKRTSAESFGINLGMARVPRVKNSG 84
Score = 36.7 bits (81), Expect = 0.48
Identities = 17/34 (50%), Positives = 24/34 (70%)
Frame = +2
Query: 515 WSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLII 616
+ D+ +V + R+RAGKGKMR R+ + GPLII
Sbjct: 173 YDDVERVKERIRIRAGKGKMRGRKYKEPIGPLII 206
Score = 35.9 bits (79), Expect = 0.84
Identities = 15/48 (31%), Positives = 28/48 (58%)
Frame = +3
Query: 366 SVAATGVPALVQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRL 509
+++AT A V+ARGH+ + P+VV D + + T + FL+++
Sbjct: 123 ALSATADIAFVRARGHVFKDSVRFPIVVTDDIVNLKTTSEVEEFLKKI 170
>UniRef50_Q2NFV7 Cluster: 50S ribosomal protein L4P; n=2;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Methanosphaera stadtmanae (strain DSM 3091)
Length = 259
Score = 53.6 bits (123), Expect = 4e-06
Identities = 24/58 (41%), Positives = 36/58 (62%)
Frame = +2
Query: 59 LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRG 232
LP +F+ RPD++ +SM QP+ AG +T+AES+G+GR A +PRV+G
Sbjct: 19 LPEIFEEEYRPDVIKRAVISMQTARIQPWGTDPMAGKRTTAESFGSGRGAAMVPRVKG 76
Score = 37.5 bits (83), Expect = 0.28
Identities = 13/40 (32%), Positives = 27/40 (67%)
Frame = +3
Query: 366 SVAATGVPALVQARGHIIEKIPELPLVVADKVQEINKTKQ 485
++AAT LV+ RGH + ++ ++P V+ D+++ + TK+
Sbjct: 117 AIAATANKELVEQRGHQVSELEQIPFVIDDEIETVKTTKE 156
Score = 37.5 bits (83), Expect = 0.28
Identities = 14/38 (36%), Positives = 25/38 (65%)
Frame = +2
Query: 521 DILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKGSG 634
DI++ K +++++GKGK+R R+ KGPL++ G
Sbjct: 169 DIVRAKKGRKIKSGKGKLRGRKYRTPKGPLVVVGNDRG 206
>UniRef50_Q9YFM1 Cluster: 50S ribosomal protein L4P; n=8;
Archaea|Rep: 50S ribosomal protein L4P - Aeropyrum
pernix
Length = 272
Score = 50.8 bits (116), Expect = 3e-05
Identities = 25/58 (43%), Positives = 34/58 (58%)
Frame = +2
Query: 59 LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRG 232
LP +F+ P+R DL+ +S QP AG +TSA S G GR VAR+PR++G
Sbjct: 31 LPQIFRFPVRKDLIRRAFLSEFTARLQPKGRDPMAGKRTSAVSLGVGRGVARVPRIKG 88
Score = 32.7 bits (71), Expect = 7.8
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = +2
Query: 494 LPEAPKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLII 616
L E+ + D+L+ + +R AGKGKMR RR K L +
Sbjct: 172 LLESVGVYEDVLRAKEGKRYNAGKGKMRGRRYKVPKSVLFV 212
>UniRef50_Q8ZW51 Cluster: 50S ribosomal protein L4P; n=9;
Archaea|Rep: 50S ribosomal protein L4P - Pyrobaculum
aerophilum
Length = 283
Score = 50.4 bits (115), Expect = 4e-05
Identities = 25/57 (43%), Positives = 33/57 (57%)
Frame = +2
Query: 62 PFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRG 232
P F PIRPDL+ ++S QP V + AG + S ES+G G +ARIPR +G
Sbjct: 45 PLHFLEPIRPDLIRRAYLSALSARFQPKGVYEGAGKEHSCESFGVGLGIARIPRYKG 101
Score = 48.4 bits (110), Expect = 1e-04
Identities = 24/80 (30%), Positives = 39/80 (48%)
Frame = +3
Query: 249 PVGCLR*HVSWWTYVRPHEALAALAPSRQPPTAESGLGGSVAATGVPALVQARGHIIEKI 428
P GC + P + L + + ++AAT + V ARGH++EK+
Sbjct: 105 PRGCFAPNTRGGRRAHPPKVEKKLHEEINKKEKKLAIRSAIAATAYRSWVAARGHVVEKV 164
Query: 429 PELPLVVADKVQEINKTKQA 488
P LP+VV ++IN+ K+A
Sbjct: 165 PSLPVVVVGDAEKINRAKEA 184
Score = 36.7 bits (81), Expect = 0.48
Identities = 16/39 (41%), Positives = 24/39 (61%)
Frame = +2
Query: 500 EAPKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLII 616
EA W D+ + + ++RAGKGKMR RR + K L++
Sbjct: 189 EALGLWPDVERAAEGVKIRAGKGKMRGRRYKEPKSVLVV 227
>UniRef50_Q3LWC7 Cluster: Ribosomal protein L4A; n=1; Bigelowiella
natans|Rep: Ribosomal protein L4A - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 278
Score = 48.8 bits (111), Expect = 1e-04
Identities = 18/32 (56%), Positives = 27/32 (84%)
Frame = +2
Query: 161 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGR 256
+G+Q SA+SWG GR +ARIPR++G GT ++G+
Sbjct: 59 SGNQVSAKSWGPGRGLARIPRIKGSGTRKAGQ 90
>UniRef50_P12735 Cluster: 50S ribosomal protein L4P; n=1; Haloarcula
marismortui|Rep: 50S ribosomal protein L4P - Haloarcula
marismortui (Halobacterium marismortui)
Length = 246
Score = 48.4 bits (110), Expect = 1e-04
Identities = 23/58 (39%), Positives = 34/58 (58%)
Frame = +2
Query: 59 LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRG 232
LP VF+ P+R DL+ + N +Q Y + AG +T AES+G+GR A +P+ G
Sbjct: 18 LPDVFETPVRSDLIGKAVRAAQANRKQDYGSDEYAGLRTPAESFGSGRGQAHVPKQDG 75
>UniRef50_O28355 Cluster: 50S ribosomal protein L4P; n=9;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Archaeoglobus fulgidus
Length = 252
Score = 47.6 bits (108), Expect = 3e-04
Identities = 22/59 (37%), Positives = 33/59 (55%)
Frame = +2
Query: 59 LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGG 235
LP VF RPD++ +++ + RQPY + +G S E+WG G AR+PR + G
Sbjct: 18 LPEVFAEEFRPDIIKRAVLALQSHRRQPYGPNPLSGVDYSWENWGPGHGYARVPRWKLG 76
Score = 39.1 bits (87), Expect = 0.090
Identities = 15/40 (37%), Positives = 27/40 (67%)
Frame = +2
Query: 515 WSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKGSG 634
++D+ + + +R RAG+GKMR RR +++K L++ K G
Sbjct: 164 YADVERAKERKRYRAGRGKMRGRRYVKKKSVLLVVGKDDG 203
Score = 33.5 bits (73), Expect = 4.5
Identities = 17/51 (33%), Positives = 29/51 (56%)
Frame = +3
Query: 357 LGGSVAATGVPALVQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRL 509
L ++AAT LV+ R H+ E ELP VV+++++ + +TK R +
Sbjct: 113 LKSAIAATANEELVRQRSHVFEG--ELPKVVSNELESVKRTKDVAEVFRAI 161
>UniRef50_UPI00005A24EF Cluster: PREDICTED: similar to ribosomal
protein L4; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L4 - Canis familiaris
Length = 253
Score = 47.2 bits (107), Expect = 3e-04
Identities = 20/24 (83%), Positives = 22/24 (91%)
Frame = +2
Query: 509 KAWSDILKVYKSQRLRAGKGKMRN 580
KAW+DI KVY SQR+RAGKGKMRN
Sbjct: 38 KAWNDIKKVYASQRMRAGKGKMRN 61
Score = 46.4 bits (105), Expect = 6e-04
Identities = 19/37 (51%), Positives = 30/37 (81%)
Frame = +3
Query: 402 ARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLR 512
++GH I ++PELPLVV DKV+ KT++AV+ L++L+
Sbjct: 2 SKGHRIGEVPELPLVVEDKVEGYKKTEEAVLLLKKLK 38
>UniRef50_A7QKL2 Cluster: Chromosome chr2 scaffold_113, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr2 scaffold_113, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 145
Score = 45.2 bits (102), Expect = 0.001
Identities = 19/47 (40%), Positives = 31/47 (65%)
Frame = +3
Query: 369 VAATGVPALVQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRL 509
+A + V +LV ARGH IE + ELPLV+ D + ++KT + L+++
Sbjct: 13 IATSAVLSLVMARGHRIESVLELPLVIGDSTKSVDKTSTTIDILKQV 59
>UniRef50_A0RVX5 Cluster: Ribosomal protein L4; n=2;
Thermoprotei|Rep: Ribosomal protein L4 - Cenarchaeum
symbiosum
Length = 271
Score = 44.8 bits (101), Expect = 0.002
Identities = 27/73 (36%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Frame = +2
Query: 41 QGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWG--TGRAVAR 214
+G LP VF P R DL+ + + + QP AG SA+S TG AR
Sbjct: 12 KGKEITLPPVFGTPYRRDLIKKAYTILDTHHFQPKGTHPTAGMDVSADSLNPPTGHGQAR 71
Query: 215 IPRVRGGGTHRSG 253
I R++GGG R G
Sbjct: 72 IARMKGGGGRRRG 84
Score = 38.3 bits (85), Expect = 0.16
Identities = 17/43 (39%), Positives = 29/43 (67%)
Frame = +3
Query: 357 LGGSVAATGVPALVQARGHIIEKIPELPLVVADKVQEINKTKQ 485
L ++AAT + V RGHII+ I ELP+V++D ++ ++K +
Sbjct: 120 LCSAIAATASKSTVAGRGHIIDGI-ELPIVISDDIESVSKASE 161
>UniRef50_A7R5H8 Cluster: Chromosome undetermined scaffold_974,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_974, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 386
Score = 44.0 bits (99), Expect = 0.003
Identities = 20/36 (55%), Positives = 24/36 (66%)
Frame = +2
Query: 512 AWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIF 619
A+ D K S + GKGKMRNRR I RKGPLI++
Sbjct: 39 AYLDTEKAKDSHAIHPGKGKMRNRRYISRKGPLIVY 74
Score = 43.2 bits (97), Expect = 0.006
Identities = 17/35 (48%), Positives = 24/35 (68%)
Frame = +3
Query: 402 ARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRR 506
ARGH IE +PELPLV+ D + + KT A+ L++
Sbjct: 2 ARGHRIESVPELPLVIGDSAESVEKTSAAIDILKQ 36
>UniRef50_Q9HIR0 Cluster: 50S ribosomal protein L4P; n=4;
Thermoplasmatales|Rep: 50S ribosomal protein L4P -
Thermoplasma acidophilum
Length = 255
Score = 43.2 bits (97), Expect = 0.006
Identities = 47/194 (24%), Positives = 76/194 (39%), Gaps = 3/194 (1%)
Frame = +2
Query: 59 LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGG 238
LP VF +R D++ ++S + RQPY S AG + + G ++R+PR+ GG
Sbjct: 20 LPEVFDTEVREDIIRRAFRAISLSMRQPYGSSPLAGMRRVGHTTRPGLGISRMPRI-AGG 78
Query: 239 THRSGRXXXXXXXXXXXXXXXRSPGGVGTVASTSDSGERPWRQRCCYRRPSARSG*--RT 412
+ G SP + + ER + ++ R
Sbjct: 79 SRVVG------IASAVGGKSAHSPRTTKNLYVKINDRERKMAKYSAIALTASVEAVKKRG 132
Query: 413 HY*KDSRASPGCSRQS-PGDQQDQTGCHLPEAPKAWSDILKVYKSQRLRAGKGKMRNRRR 589
H K+ P G + + L + + DI + + + +RAG+GKMR RR
Sbjct: 133 HRFKEGLKLPIVVEDGVEGINKTKDAIALLKNLGVYEDIERSREGKHIRAGRGKMRGRRY 192
Query: 590 IQRKGPLIIFNKGS 631
Q K LI+ S
Sbjct: 193 KQPKSVLIVARNSS 206
Score = 40.7 bits (91), Expect = 0.030
Identities = 20/48 (41%), Positives = 30/48 (62%)
Frame = +3
Query: 366 SVAATGVPALVQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRL 509
++A T V+ RGH ++ +LP+VV D V+ INKTK A+ L+ L
Sbjct: 118 AIALTASVEAVKKRGHRFKEGLKLPIVVEDGVEGINKTKDAIALLKNL 165
>UniRef50_Q673S8 Cluster: Ribosomal protein L4; n=3; cellular
organisms|Rep: Ribosomal protein L4 - uncultured marine
group II euryarchaeote DeepAnt-JyKC7
Length = 304
Score = 42.7 bits (96), Expect = 0.007
Identities = 29/77 (37%), Positives = 36/77 (46%), Gaps = 7/77 (9%)
Frame = +2
Query: 32 ETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSK-------EAGHQTSAESW 190
E G A LP VF IR DL+ ++ N RQ Y + +AG + S E W
Sbjct: 41 EAKNGKAVTLPDVFSGEIREDLIRRAVLASRANRRQSYGHREHDGKRKPQAGMKHSVEWW 100
Query: 191 GTGRAVARIPRVRGGGT 241
G GR V+RI R G T
Sbjct: 101 GKGRGVSRIMRKAGQRT 117
>UniRef50_P60847 Cluster: 50S ribosomal protein L4P; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L4P -
Nanoarchaeum equitans
Length = 268
Score = 40.3 bits (90), Expect = 0.039
Identities = 19/34 (55%), Positives = 26/34 (76%)
Frame = +2
Query: 521 DILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFN 622
++ +VY+ +R RAGKGK R R I+RKGPLI+ N
Sbjct: 180 ELERVYEIKR-RAGKGKRRGRAYIERKGPLIVVN 212
Score = 34.7 bits (76), Expect = 1.9
Identities = 21/48 (43%), Positives = 33/48 (68%)
Frame = +3
Query: 366 SVAATGVPALVQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRL 509
++AAT LV+ARGHII+K +P+VV D ++++ KTK+ L +L
Sbjct: 131 ALAATKELDLVKARGHIIDK--PVPIVV-DGLEQLRKTKEIQQLLLKL 175
>UniRef50_Q4FXU7 Cluster: Putative uncharacterized protein; n=2;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major strain Friedlin
Length = 534
Score = 37.1 bits (82), Expect = 0.36
Identities = 15/27 (55%), Positives = 17/27 (62%)
Frame = +3
Query: 258 CLR*HVSWWTYVRPHEALAALAPSRQP 338
C+R HV WW +VR E L LAP QP
Sbjct: 142 CVRQHVPWWPHVRADEDLPPLAPQDQP 168
>UniRef50_A7Q400 Cluster: Chromosome chr13 scaffold_48, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr13 scaffold_48, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 131
Score = 36.7 bits (81), Expect = 0.48
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = -3
Query: 302 VGANIRPPRHMLPKAP 255
VGANI PPRHMLPKAP
Sbjct: 107 VGANILPPRHMLPKAP 122
>UniRef50_A7S7R2 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 181
Score = 36.3 bits (80), Expect = 0.64
Identities = 19/66 (28%), Positives = 32/66 (48%)
Frame = +2
Query: 455 QSPGDQQDQTGCHLPEAPKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKGSG 634
++PG + + C +P+ + K YK + R KG+ N + GP + K +G
Sbjct: 2 ENPGSEPPRCRCGFFGSPQTLNLCSKCYKDELKRKSKGEEGNSSMVSSTGP-VFAPKSAG 60
Query: 635 SDSRLP 652
S SR+P
Sbjct: 61 SSSRVP 66
>UniRef50_Q95YH2 Cluster: Ribosomal protein L4; n=1; Paramecium
caudatum|Rep: Ribosomal protein L4 - Paramecium caudatum
Length = 252
Score = 35.5 bits (78), Expect = 1.1
Identities = 14/36 (38%), Positives = 24/36 (66%)
Frame = +2
Query: 512 AWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIF 619
A+ D+ KV ++ +RAG K R ++ RKGPL+++
Sbjct: 23 AFEDVQKVVSTKTIRAGVSKSRGKKYRVRKGPLVVY 58
>UniRef50_UPI00015B4B32 Cluster: PREDICTED: hypothetical protein;
n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical
protein - Nasonia vitripennis
Length = 1628
Score = 34.7 bits (76), Expect = 1.9
Identities = 14/31 (45%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Frame = -3
Query: 260 APDRTYEYHHHGHAEFGRQHVQ-YPMIQHWF 171
APD + +HHHGH G HV+ YP F
Sbjct: 183 APDTRHGHHHHGHHNHGHHHVEPYPATDSLF 213
>UniRef50_A3LGX4 Cluster: Putative uncharacterized protein; n=1;
Pseudomonas aeruginosa 2192|Rep: Putative
uncharacterized protein - Pseudomonas aeruginosa 2192
Length = 489
Score = 34.3 bits (75), Expect = 2.6
Identities = 32/97 (32%), Positives = 43/97 (44%), Gaps = 1/97 (1%)
Frame = +2
Query: 302 RSPGGVGTVASTSDSGERPWRQRCCYRRPSARSG*RTHY*KD-SRASPGCSRQSPGDQQD 478
R+ G G S + RP R R RR AR R + SR++PGCSR+S ++
Sbjct: 12 RATGSAGRWGRGSPAA-RPCR-RSHRRRTGARRSVRWCGSRARSRSAPGCSRRSDRGRRS 69
Query: 479 QTGCHLPEAPKAWSDILKVYKSQRLRAGKGKMRNRRR 589
P AP A + +R R G G+ R RR
Sbjct: 70 SGSSRSPSAPAA---AVPAAARRRSRRGAGRSRTGRR 103
>UniRef50_Q7F729 Cluster: OSJNBa0004B13.22 protein; n=2; Oryza
sativa (japonica cultivar-group)|Rep: OSJNBa0004B13.22
protein - Oryza sativa subsp. japonica (Rice)
Length = 248
Score = 34.3 bits (75), Expect = 2.6
Identities = 18/49 (36%), Positives = 23/49 (46%)
Frame = +2
Query: 317 VGTVASTSDSGERPWRQRCCYRRPSARSG*RTHY*KDSRASPGCSRQSP 463
+GT AS G+RPW R C+ R RS T + A P R +P
Sbjct: 106 IGTAASIFSGGQRPWACRSCHLRGGCRSSATTR--RRVTAEPRALRSTP 152
>UniRef50_Q9U2L6 Cluster: Putative uncharacterized protein sre-16;
n=1; Caenorhabditis elegans|Rep: Putative
uncharacterized protein sre-16 - Caenorhabditis elegans
Length = 337
Score = 34.3 bits (75), Expect = 2.6
Identities = 24/56 (42%), Positives = 33/56 (58%)
Frame = +3
Query: 414 IIEKIPELPLVVADKVQEINKTKQAVIFLRRLRHGLISLRCTSLSVFVLVRVKCAT 581
I+EKI E + KV+E + Q IFL+ +R LIS SL++ VL R+ CAT
Sbjct: 64 ILEKILE----IMGKVEEYESSNQPYIFLQFVRTALISTPFHSLAITVLERL-CAT 114
>UniRef50_Q8S0V8 Cluster: Splicing coactivator subunit-like protein;
n=13; Oryza sativa (japonica cultivar-group)|Rep:
Splicing coactivator subunit-like protein - Oryza sativa
subsp. japonica (Rice)
Length = 382
Score = 33.9 bits (74), Expect = 3.4
Identities = 39/145 (26%), Positives = 53/145 (36%), Gaps = 1/145 (0%)
Frame = +2
Query: 173 TSAESWGTGRAVAR-IPRVRGGGTHRSGRXXXXXXXXXXXXXXXRSPGGVGTVASTSDSG 349
T A+ G G R P V G R R R GG G + SG
Sbjct: 83 TPAQPTGGGAPAPRWSPPVTTGAAERRPREGREGGSETAVHGSPRVDGGDG---NDDRSG 139
Query: 350 ERPWRQRCCYRRPSARSG*RTHY*KDSRASPGCSRQSPGDQQDQTGCHLPEAPKAWSDIL 529
R R+R RR RSG R + R GC GD + G P + W+
Sbjct: 140 GR--RRRGSGRRGRRRSGGRRAKWRGGRGRRGCGEPEEGDAETGGG---PGRRRRWTGAR 194
Query: 530 KVYKSQRLRAGKGKMRNRRRIQRKG 604
+ + +R + ++R R R+ R G
Sbjct: 195 RRRRRER-ATSRAQIRRRGRVARGG 218
>UniRef50_Q4WUX5 Cluster: Sensor histidine kinase/response
regulator, putative; n=1; Aspergillus fumigatus|Rep:
Sensor histidine kinase/response regulator, putative -
Aspergillus fumigatus (Sartorya fumigata)
Length = 177
Score = 33.9 bits (74), Expect = 3.4
Identities = 29/96 (30%), Positives = 42/96 (43%), Gaps = 8/96 (8%)
Frame = +2
Query: 335 TSDSGERPWRQRCCYRRPSARSG*RTHY*KDSRASPGCSRQSPGDQQDQTGC-HLPEAPK 511
T D RP R RR R H KD RA P +R+ QD G H + P+
Sbjct: 69 TRDDDSRPLRPH--QRRRRHLHYRRHHPGKDRRAFPAANRRGSSAAQDPAGAVHRHDQPR 126
Query: 512 AWSDILK---VYKSQRLRA----GKGKMRNRRRIQR 598
+ L+ +++ R G+G+ R RRR++R
Sbjct: 127 STEPALRHPALHRGHSQRGAPDPGRGRARRRRRMRR 162
>UniRef50_A0W7C0 Cluster: Diguanylate cyclase/phosphodiesterase with
PAS/PAC sensor; n=2; cellular organisms|Rep: Diguanylate
cyclase/phosphodiesterase with PAS/PAC sensor -
Geobacter lovleyi SZ
Length = 1027
Score = 33.5 bits (73), Expect = 4.5
Identities = 22/61 (36%), Positives = 32/61 (52%)
Frame = +3
Query: 339 PTAESGLGGSVAATGVPALVQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLRHG 518
P G G V ATGVP L A G I I + +++I+ KQ+ +FL++L HG
Sbjct: 429 PALHDGKGAYVWATGVP-LYNAAGERIGAI--------EAIRDISDRKQSELFLKKLTHG 479
Query: 519 L 521
+
Sbjct: 480 I 480
>UniRef50_Q69RQ6 Cluster: Putative uncharacterized protein
OSJNBb0055I24.117; n=3; Oryza sativa|Rep: Putative
uncharacterized protein OSJNBb0055I24.117 - Oryza sativa
subsp. japonica (Rice)
Length = 826
Score = 33.5 bits (73), Expect = 4.5
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = -3
Query: 308 GFVGANIRPPRHMLPKAPDRTYEYHHHGH 222
GF + PP+ P+ PD + +HHH H
Sbjct: 30 GFFNILVPPPQSPRPRCPDHQHHHHHHHH 58
>UniRef50_Q0DYA2 Cluster: Os02g0706600 protein; n=5; Oryza
sativa|Rep: Os02g0706600 protein - Oryza sativa subsp.
japonica (Rice)
Length = 512
Score = 33.5 bits (73), Expect = 4.5
Identities = 14/36 (38%), Positives = 16/36 (44%)
Frame = -3
Query: 284 PPRHMLPKAPDRTYEYHHHGHAEFGRQHVQYPMIQH 177
PP H P P + +HHH H QH Q QH
Sbjct: 475 PPLHHDPSPPPPPHHHHHHHHHHHPPQHHQQQQQQH 510
>UniRef50_Q0D693 Cluster: Os07g0499800 protein; n=1; Oryza sativa
(japonica cultivar-group)|Rep: Os07g0499800 protein -
Oryza sativa subsp. japonica (Rice)
Length = 752
Score = 33.5 bits (73), Expect = 4.5
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = -3
Query: 308 GFVGANIRPPRHMLPKAPDRTYEYHHHGH 222
GF + PP+ P+ PD + +HHH H
Sbjct: 30 GFFNILVPPPQSPRPRCPDHQHHHHHHHH 58
>UniRef50_Q5KN72 Cluster: Uv excision repair protein rhp23,
putative; n=2; Filobasidiella neoformans|Rep: Uv
excision repair protein rhp23, putative - Cryptococcus
neoformans (Filobasidiella neoformans)
Length = 406
Score = 33.5 bits (73), Expect = 4.5
Identities = 27/68 (39%), Positives = 32/68 (47%)
Frame = +3
Query: 297 PHEALAALAPSRQPPTAESGLGGSVAATGVPALVQARGHIIEKIPELPLVVADKVQEINK 476
P A A A S QP ESGLGGS TG PAL A ++E E V+ N
Sbjct: 123 PASAPAPAAESAQPSAVESGLGGSF-VTG-PALQAAIDGMVEMGFERDQVIRALRASFNN 180
Query: 477 TKQAVIFL 500
+AV +L
Sbjct: 181 PDRAVEYL 188
>UniRef50_UPI0000E1F6E9 Cluster: PREDICTED: hypothetical protein;
n=1; Pan troglodytes|Rep: PREDICTED: hypothetical
protein - Pan troglodytes
Length = 539
Score = 33.1 bits (72), Expect = 5.9
Identities = 17/47 (36%), Positives = 26/47 (55%)
Frame = +3
Query: 291 VRPHEALAALAPSRQPPTAESGLGGSVAATGVPALVQARGHIIEKIP 431
+RP + ALAP+ +PP S G A G P L+ A G +++ +P
Sbjct: 151 LRPSSRIRALAPAPRPPLLPSAQG---APHGQPTLICAPGSLLQPLP 194
>UniRef50_O00257 Cluster: E3 SUMO-protein ligase CBX4; n=13;
Eutheria|Rep: E3 SUMO-protein ligase CBX4 - Homo sapiens
(Human)
Length = 558
Score = 33.1 bits (72), Expect = 5.9
Identities = 15/49 (30%), Positives = 21/49 (42%), Gaps = 2/49 (4%)
Frame = -3
Query: 293 NIRPPRHMLPKAPDRTYEYHHHGHAEFG--RQHVQYPMIQHWFGDQPPC 153
N PP H P + +HHH H G HV+ + G++ PC
Sbjct: 374 NTHPPSHHPHPHPHHHHHHHHHHHHAVGLNLSHVRKRCLSETHGEREPC 422
>UniRef50_Q0S4B0 Cluster: Putative uncharacterized protein; n=2;
Rhodococcus sp. RHA1|Rep: Putative uncharacterized
protein - Rhodococcus sp. (strain RHA1)
Length = 449
Score = 32.7 bits (71), Expect = 7.8
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +3
Query: 324 PSRQPPTAESGLGGSVAATGVPALVQARGHIIEKIP 431
P+ P + +GG A GVPAL+ G +I +P
Sbjct: 114 PAMSAPDVGTAIGGLAALPGVPALISGLGSLIPSVP 149
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 680,250,129
Number of Sequences: 1657284
Number of extensions: 14505336
Number of successful extensions: 46972
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 44137
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 46834
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 48760335122
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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