Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10952
         (652 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    32   0.005
AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein pr...    24   0.94 
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    24   0.94 
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    22   3.8  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   3.8  
AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like prote...    22   3.8  
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    22   5.0  
AF260822-1|AAG02020.1|  138|Tribolium castaneum alpha-esterase l...    21   8.8  

>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 31.9 bits (69), Expect = 0.005
 Identities = 14/36 (38%), Positives = 20/36 (55%)
 Frame = +3

Query: 324 PSRQPPTAESGLGGSVAATGVPALVQARGHIIEKIP 431
           P    P+  SGLGG ++   +PAL    GH +E +P
Sbjct: 76  PYAPHPSLSSGLGGGLSGMPMPALGFGLGHPLESVP 111


>AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein
           protein.
          Length = 136

 Score = 24.2 bits (50), Expect = 0.94
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = +2

Query: 344 SGERPWRQRCCYRRPSARSG*RTH 415
           SGE+P+R   C RR S  S   TH
Sbjct: 45  SGEKPFRCPVCDRRFSQSSSVTTH 68



 Score = 22.2 bits (45), Expect = 3.8
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +2

Query: 323 TVASTSDSGERPWRQRCC 376
           T    + SGERP+R R C
Sbjct: 66  TTHMRTHSGERPYRCRLC 83


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 24.2 bits (50), Expect = 0.94
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = +2

Query: 344 SGERPWRQRCCYRRPSARSG*RTH 415
           SGE+P+R   C RR S  S   TH
Sbjct: 301 SGEKPFRCPVCDRRFSQSSSVTTH 324



 Score = 22.2 bits (45), Expect = 3.8
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +2

Query: 323 TVASTSDSGERPWRQRCC 376
           T    + SGERP+R R C
Sbjct: 322 TTHMRTHSGERPYRCRLC 339


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = -2

Query: 528 RISDHALGASGR*QPVWSC*SPGLC 454
           R+    LGA     PVW   +PG+C
Sbjct: 606 RLVARGLGAEAM-WPVWCAQNPGMC 629


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = +2

Query: 146  CVSKEAGHQTSAESW 190
            C  K+ GH+ S  SW
Sbjct: 1152 CEEKKPGHKPSTSSW 1166


>AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like protein
           protein.
          Length = 314

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = +2

Query: 344 SGERPWRQRCCYRRPSARSG*RTH 415
           +GERP++ + C R  + +   +TH
Sbjct: 158 TGERPFKCKICGRAFTTKGNLKTH 181


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = -3

Query: 287 RPPRHMLPKAPDRTYEYHHHGH 222
           +PP  +  +A D  YEY    H
Sbjct: 267 KPPHEVEKRAQDGQYEYRSLSH 288


>AF260822-1|AAG02020.1|  138|Tribolium castaneum alpha-esterase like
           protein E3 protein.
          Length = 138

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = +3

Query: 381 GVPALVQARGHIIEKIPELP 440
           G+P      GH+  K PELP
Sbjct: 3   GMPYAKPPLGHLRFKAPELP 22


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,594
Number of Sequences: 336
Number of extensions: 3219
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16760905
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)