Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10947X
(428 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z92784-1|CAB07192.1| 204|Caenorhabditis elegans Hypothetical pr... 58 2e-09
U31948-1|AAC47126.1| 204|Caenorhabditis elegans cyclophilin iso... 58 3e-09
U27354-1|AAC47124.1| 201|Caenorhabditis elegans cyclophilin pro... 52 2e-07
U00051-7|AAA91355.1| 201|Caenorhabditis elegans Cyclophylin pro... 52 2e-07
U30943-1|AAC47116.1| 192|Caenorhabditis elegans cyclophilin-1 p... 32 0.15
AL033512-4|CAA22075.1| 192|Caenorhabditis elegans Hypothetical ... 32 0.15
Z92822-6|CAB07303.1| 172|Caenorhabditis elegans Hypothetical pr... 31 0.46
Z74038-2|CAE48502.1| 611|Caenorhabditis elegans Hypothetical pr... 29 1.4
Z74038-1|CAA98497.2| 578|Caenorhabditis elegans Hypothetical pr... 29 1.4
Z81576-5|CAB04646.2| 1696|Caenorhabditis elegans Hypothetical pr... 28 3.3
Z81571-5|CAB04615.1| 419|Caenorhabditis elegans Hypothetical pr... 28 3.3
Z81571-3|CAB04613.1| 352|Caenorhabditis elegans Hypothetical pr... 28 3.3
U31077-1|AAC47129.1| 173|Caenorhabditis elegans cyclophilin iso... 28 3.3
AL032663-4|CAA21762.1| 173|Caenorhabditis elegans Hypothetical ... 28 3.3
AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical... 27 4.3
AL032663-1|CAA21760.1| 171|Caenorhabditis elegans Hypothetical ... 27 4.3
>Z92784-1|CAB07192.1| 204|Caenorhabditis elegans Hypothetical
protein F31C3.1 protein.
Length = 204
Score = 58.4 bits (135), Expect = 2e-09
Identities = 31/55 (56%), Positives = 36/55 (65%)
Frame = +1
Query: 259 AKSDEIPKGPKVTHKVSFDMKIGDDNIGTIVIGLSGKTVPKTTEXFFH*LRNLRG 423
A+ D+ KGPKVT KV FDM+IG IG IVIGL GKTVPKT F + +G
Sbjct: 17 AQGDDA-KGPKVTDKVYFDMEIGGKPIGRIVIGLFGKTVPKTATNFIELAKKPKG 70
>U31948-1|AAC47126.1| 204|Caenorhabditis elegans cyclophilin
isoform 5 protein.
Length = 204
Score = 58.0 bits (134), Expect = 3e-09
Identities = 29/48 (60%), Positives = 32/48 (66%)
Frame = +1
Query: 280 KGPKVTHKVSFDMKIGDDNIGTIVIGLSGKTVPKTTEXFFH*LRNLRG 423
KGPKVT KV FDM+IG IG IVIGL GKTVPKT F + +G
Sbjct: 23 KGPKVTDKVYFDMEIGGKPIGRIVIGLFGKTVPKTATNFIELAKKPKG 70
>U27354-1|AAC47124.1| 201|Caenorhabditis elegans cyclophilin
protein.
Length = 201
Score = 51.6 bits (118), Expect = 2e-07
Identities = 28/52 (53%), Positives = 35/52 (67%)
Frame = +1
Query: 241 FVVHRSAKSDEIPKGPKVTHKVSFDMKIGDDNIGTIVIGLSGKTVPKTTEXF 396
FV+ A S E +GP+VT KV FDM+IG +G IVIGL G+ VPKT + F
Sbjct: 8 FVLAILALSAEA-RGPRVTDKVFFDMEIGGRPVGKIVIGLFGEVVPKTVKNF 58
>U00051-7|AAA91355.1| 201|Caenorhabditis elegans Cyclophylin
protein 6 protein.
Length = 201
Score = 51.6 bits (118), Expect = 2e-07
Identities = 28/52 (53%), Positives = 35/52 (67%)
Frame = +1
Query: 241 FVVHRSAKSDEIPKGPKVTHKVSFDMKIGDDNIGTIVIGLSGKTVPKTTEXF 396
FV+ A S E +GP+VT KV FDM+IG +G IVIGL G+ VPKT + F
Sbjct: 8 FVLAILALSAEA-RGPRVTDKVFFDMEIGGRPVGKIVIGLFGEVVPKTVKNF 58
>U30943-1|AAC47116.1| 192|Caenorhabditis elegans cyclophilin-1
protein.
Length = 192
Score = 32.3 bits (70), Expect = 0.15
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +1
Query: 301 KVSFDMKIGDDNIGTIVIGLSGKTVPKTTEXF 396
KV FD+ IG++ G + + L VPKT E F
Sbjct: 23 KVFFDVSIGEEPAGRVTMELFNDVVPKTAENF 54
>AL033512-4|CAA22075.1| 192|Caenorhabditis elegans Hypothetical
protein Y49A3A.5 protein.
Length = 192
Score = 32.3 bits (70), Expect = 0.15
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +1
Query: 301 KVSFDMKIGDDNIGTIVIGLSGKTVPKTTEXF 396
KV FD+ IG++ G + + L VPKT E F
Sbjct: 23 KVFFDVSIGEEPAGRVTMELFNDVVPKTAENF 54
>Z92822-6|CAB07303.1| 172|Caenorhabditis elegans Hypothetical
protein ZK520.5 protein.
Length = 172
Score = 30.7 bits (66), Expect = 0.46
Identities = 16/32 (50%), Positives = 18/32 (56%)
Frame = +1
Query: 301 KVSFDMKIGDDNIGTIVIGLSGKTVPKTTEXF 396
KV FD+ IG G IV+ L VPKT E F
Sbjct: 5 KVFFDITIGGKKGGRIVMELYNDIVPKTAENF 36
>Z74038-2|CAE48502.1| 611|Caenorhabditis elegans Hypothetical
protein F58B4.1b protein.
Length = 611
Score = 29.1 bits (62), Expect = 1.4
Identities = 13/53 (24%), Positives = 26/53 (49%)
Frame = +1
Query: 184 KETN*TRFNHGYPYNGFRNFVVHRSAKSDEIPKGPKVTHKVSFDMKIGDDNIG 342
KET+ T FN+G PY+ + + + + + + K + + +G D +G
Sbjct: 289 KETSNTNFNYGMPYD-YGSIMQYGATSASSNDKATMIARDTEYQDTMGSDFVG 340
>Z74038-1|CAA98497.2| 578|Caenorhabditis elegans Hypothetical
protein F58B4.1a protein.
Length = 578
Score = 29.1 bits (62), Expect = 1.4
Identities = 13/53 (24%), Positives = 26/53 (49%)
Frame = +1
Query: 184 KETN*TRFNHGYPYNGFRNFVVHRSAKSDEIPKGPKVTHKVSFDMKIGDDNIG 342
KET+ T FN+G PY+ + + + + + + K + + +G D +G
Sbjct: 289 KETSNTNFNYGMPYD-YGSIMQYGATSASSNDKATMIARDTEYQDTMGSDFVG 340
>Z81576-5|CAB04646.2| 1696|Caenorhabditis elegans Hypothetical
protein R10E8.6 protein.
Length = 1696
Score = 27.9 bits (59), Expect = 3.3
Identities = 14/49 (28%), Positives = 24/49 (48%), Gaps = 3/49 (6%)
Frame = -2
Query: 283 LWEFHQIWHYDEQQNS*SH---CKGTHD*NEFSSFPCYFYKIRFECLFF 146
+W+ ++ D S +H C+ + + FSS C FY I F+ + F
Sbjct: 202 IWKSARVVDIDSLYLSHAHKFSCQPVEEISHFSSVSCIFYSINFDDMVF 250
>Z81571-5|CAB04615.1| 419|Caenorhabditis elegans Hypothetical
protein M01G12.6 protein.
Length = 419
Score = 27.9 bits (59), Expect = 3.3
Identities = 22/84 (26%), Positives = 44/84 (52%)
Frame = -1
Query: 323 IFMSKLTL*VTLGPLGISSDLALR*TTKFLKPL*GYP*LKRV*FVSLLFLQNSFRMFIFS 144
+F + L ++L PLG+S L L +T+FL P+ + L+ + V ++F N+ F+
Sbjct: 334 VFYNTLFFFISLFPLGVSRTLLLLSSTEFLWPM--FIDLESI--VLVIFTLNTMSHFVI- 388
Query: 143 KFTI*NKKFDLKTKPIYYFTD*EQ 72
+ + + ++ TK ++ D Q
Sbjct: 389 -YMLMSSQYQNTTKELFLCGDSHQ 411
>Z81571-3|CAB04613.1| 352|Caenorhabditis elegans Hypothetical
protein M01G12.4 protein.
Length = 352
Score = 27.9 bits (59), Expect = 3.3
Identities = 22/84 (26%), Positives = 44/84 (52%)
Frame = -1
Query: 323 IFMSKLTL*VTLGPLGISSDLALR*TTKFLKPL*GYP*LKRV*FVSLLFLQNSFRMFIFS 144
+F + L ++L PLG+S L L +T+FL P+ + L+ + V ++F N+ F+
Sbjct: 267 VFYNTLFFFISLFPLGVSRTLLLLSSTEFLWPM--FIDLESI--VLVIFTLNTMSHFVI- 321
Query: 143 KFTI*NKKFDLKTKPIYYFTD*EQ 72
+ + + ++ TK ++ D Q
Sbjct: 322 -YMLMSSQYQNTTKELFLCGDSHQ 344
>U31077-1|AAC47129.1| 173|Caenorhabditis elegans cyclophilin
isoform 3 protein.
Length = 173
Score = 27.9 bits (59), Expect = 3.3
Identities = 15/32 (46%), Positives = 17/32 (53%)
Frame = +1
Query: 301 KVSFDMKIGDDNIGTIVIGLSGKTVPKTTEXF 396
KV FD+ IG G IV+ L VPKT F
Sbjct: 5 KVFFDITIGGKASGRIVMELYDDVVPKTAGNF 36
>AL032663-4|CAA21762.1| 173|Caenorhabditis elegans Hypothetical
protein Y75B12B.5 protein.
Length = 173
Score = 27.9 bits (59), Expect = 3.3
Identities = 15/32 (46%), Positives = 17/32 (53%)
Frame = +1
Query: 301 KVSFDMKIGDDNIGTIVIGLSGKTVPKTTEXF 396
KV FD+ IG G IV+ L VPKT F
Sbjct: 5 KVFFDITIGGKASGRIVMELYDDVVPKTAGNF 36
>AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical
protein Y116A8C.34 protein.
Length = 331
Score = 27.5 bits (58), Expect = 4.3
Identities = 15/32 (46%), Positives = 17/32 (53%)
Frame = +1
Query: 301 KVSFDMKIGDDNIGTIVIGLSGKTVPKTTEXF 396
+V +KIG IG IVI L PKT E F
Sbjct: 140 RVYLGVKIGIRYIGRIVIELRTDVTPKTAENF 171
>AL032663-1|CAA21760.1| 171|Caenorhabditis elegans Hypothetical
protein Y75B12B.2 protein.
Length = 171
Score = 27.5 bits (58), Expect = 4.3
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +1
Query: 301 KVSFDMKIGDDNIGTIVIGLSGKTVPKTTEXF 396
+V FD+ I G IV+ L VPKT E F
Sbjct: 5 RVFFDITIAGKPTGRIVMELYNDIVPKTAENF 36
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,639,317
Number of Sequences: 27780
Number of extensions: 164155
Number of successful extensions: 411
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 396
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 411
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 713998766
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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