Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10944X
(374 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P27635 Cluster: 60S ribosomal protein L10; n=53; Fungi/... 156 1e-37
UniRef50_Q96L21 Cluster: 60S ribosomal protein L10-like; n=168; ... 155 3e-37
UniRef50_UPI00015B4E4A Cluster: PREDICTED: similar to ribosomal ... 153 8e-37
UniRef50_Q5B047 Cluster: Putative uncharacterized protein; n=1; ... 144 6e-34
UniRef50_Q9M5M7 Cluster: 60S ribosomal protein L10; n=52; Eukary... 142 2e-33
UniRef50_UPI0000499E88 Cluster: 60S ribosomal protein L10; n=1; ... 116 2e-25
UniRef50_UPI0000DD7A8E Cluster: PREDICTED: similar to ribosomal ... 105 2e-22
UniRef50_UPI0000EBD477 Cluster: PREDICTED: similar to ribosomal ... 105 3e-22
UniRef50_UPI0000D9B764 Cluster: PREDICTED: similar to 60S riboso... 104 5e-22
UniRef50_UPI00006C12B9 Cluster: PREDICTED: similar to ribosomal ... 102 2e-21
UniRef50_Q3LW95 Cluster: Ribosomal protein L10e; n=1; Bigelowiel... 96 2e-19
UniRef50_Q58DU2 Cluster: Similar to 60S ribosomal protein L10; n... 96 2e-19
UniRef50_UPI0000DD7887 Cluster: PREDICTED: similar to 60S riboso... 94 7e-19
UniRef50_UPI0000EBF019 Cluster: PREDICTED: similar to ribosomal ... 93 1e-18
UniRef50_UPI0000EB0151 Cluster: UPI0000EB0151 related cluster; n... 87 7e-17
UniRef50_UPI00005A4DCE Cluster: PREDICTED: similar to ribosomal ... 85 3e-16
UniRef50_O27191 Cluster: 50S ribosomal protein L10e; n=6; Euryar... 73 1e-12
UniRef50_Q8ISR4 Cluster: QM protein; n=16; Coelomata|Rep: QM pro... 70 1e-11
UniRef50_Q8ZSV4 Cluster: 50S ribosomal protein L10e; n=9; Thermo... 70 2e-11
UniRef50_UPI00015BAE8F Cluster: LSU ribosomal protein L10AE; n=1... 69 3e-11
UniRef50_Q6LXR0 Cluster: 50S ribosomal protein L10e; n=3; Methan... 67 9e-11
UniRef50_P58299 Cluster: 50S ribosomal protein L10e; n=9; Archae... 66 1e-10
UniRef50_Q96YA4 Cluster: 50S ribosomal protein L10e; n=4; Sulfol... 64 6e-10
UniRef50_A7I691 Cluster: Ribosomal protein L10E; n=5; Archaea|Re... 64 8e-10
UniRef50_Q01C82 Cluster: 3'-5' exonuclease, putative; n=3; Ostre... 63 2e-09
UniRef50_Q2FLD3 Cluster: Ribosomal protein L10.e; n=3; Methanomi... 62 3e-09
UniRef50_UPI00005A4DCA Cluster: PREDICTED: similar to ribosomal ... 62 4e-09
UniRef50_Q9UWP5 Cluster: 50S ribosomal protein L10e; n=4; Thermo... 62 4e-09
UniRef50_A0RWP6 Cluster: Ribosomal protein L16/L10E; n=2; Thermo... 60 2e-08
UniRef50_P60617 Cluster: 50S ribosomal protein L10e; n=9; Euryar... 57 1e-07
UniRef50_Q74M84 Cluster: 50S ribosomal protein L10e; n=1; Nanoar... 49 3e-05
UniRef50_A4H504 Cluster: Putative uncharacterized protein; n=1; ... 34 0.98
UniRef50_Q0J7R7 Cluster: Os08g0168700 protein; n=6; Oryza sativa... 33 1.3
UniRef50_Q9RWX3 Cluster: Glycerophosphoryl diester phosphodieste... 33 2.3
UniRef50_A3YU04 Cluster: Putative uncharacterized protein; n=1; ... 32 3.9
UniRef50_Q8YPE7 Cluster: Alr4247 protein; n=5; Cyanobacteria|Rep... 31 5.2
UniRef50_UPI0000E252AC Cluster: PREDICTED: hypothetical protein;... 31 6.9
UniRef50_Q8IM18 Cluster: Putative uncharacterized protein; n=1; ... 31 6.9
UniRef50_Q2UIX8 Cluster: Predicted protein; n=1; Aspergillus ory... 31 6.9
UniRef50_A6LH78 Cluster: Putative outer membrane protein, probab... 31 9.1
UniRef50_A1TH01 Cluster: Putative uncharacterized protein; n=2; ... 31 9.1
UniRef50_Q8I6J5 Cluster: Fibroblast growth factor 8/17/18; n=1; ... 31 9.1
UniRef50_Q4P549 Cluster: Putative uncharacterized protein; n=1; ... 31 9.1
>UniRef50_P27635 Cluster: 60S ribosomal protein L10; n=53;
Fungi/Metazoa group|Rep: 60S ribosomal protein L10 -
Homo sapiens (Human)
Length = 214
Score = 156 bits (378), Expect = 1e-37
Identities = 73/88 (82%), Positives = 78/88 (88%)
Frame = +2
Query: 2 RLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVRIGQPIMSVRSSDRWKAQVI 181
RLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARV IGQ IMS+R+ + K VI
Sbjct: 90 RLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVHIGQVIMSIRTKLQNKEHVI 149
Query: 182 EALRRAKFKFPGRQKIYVSKKWGFKSMN 265
EALRRAKFKFPGRQKI++SKKWGF N
Sbjct: 150 EALRRAKFKFPGRQKIHISKKWGFTKFN 177
Score = 55.6 bits (128), Expect = 3e-07
Identities = 24/45 (53%), Positives = 29/45 (64%)
Frame = +1
Query: 238 KEVGFQKYERDEFEKLREEGRLANDGCIVQYRPEHGPLDAWRKVH 372
K+ GF K+ DEFE + E RL DGC V+Y P GPLD WR +H
Sbjct: 169 KKWGFTKFNADEFEDMVAEKRLIPDGCGVKYIPNRGPLDKWRALH 213
>UniRef50_Q96L21 Cluster: 60S ribosomal protein L10-like; n=168;
Eukaryota|Rep: 60S ribosomal protein L10-like - Homo
sapiens (Human)
Length = 214
Score = 155 bits (375), Expect = 3e-37
Identities = 73/98 (74%), Positives = 80/98 (81%)
Frame = +2
Query: 2 RLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVRIGQPIMSVRSSDRWKAQVI 181
RLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARV IGQ IMS+R+ + + VI
Sbjct: 90 RLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVHIGQVIMSIRTKLQNEEHVI 149
Query: 182 EALRRAKFKFPGRQKIYVSKKWGFKSMNVMSLRSCVKR 295
EALRRAKFKFPGRQKI++SKKWGF N V +
Sbjct: 150 EALRRAKFKFPGRQKIHISKKWGFTKFNADEFEDMVAK 187
Score = 53.6 bits (123), Expect = 1e-06
Identities = 23/45 (51%), Positives = 29/45 (64%)
Frame = +1
Query: 238 KEVGFQKYERDEFEKLREEGRLANDGCIVQYRPEHGPLDAWRKVH 372
K+ GF K+ DEFE + + L DGC V+Y P HGPLD WR +H
Sbjct: 169 KKWGFTKFNADEFEDMVAKKCLIPDGCGVKYVPSHGPLDKWRVLH 213
>UniRef50_UPI00015B4E4A Cluster: PREDICTED: similar to ribosomal
protein L10e isoform 2; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to ribosomal protein L10e isoform 2 -
Nasonia vitripennis
Length = 194
Score = 153 bits (372), Expect = 8e-37
Identities = 72/76 (94%), Positives = 74/76 (97%)
Frame = +2
Query: 26 RINKMLSCAGADRLQTGMRGAFGKPQGTVARVRIGQPIMSVRSSDRWKAQVIEALRRAKF 205
+INKMLSCAGADRLQTGMRGAFGKPQGTVARVRIGQPIMS+RSSDR KA VIEALRRAKF
Sbjct: 74 KINKMLSCAGADRLQTGMRGAFGKPQGTVARVRIGQPIMSIRSSDRHKASVIEALRRAKF 133
Query: 206 KFPGRQKIYVSKKWGF 253
KFPGRQKIYVSKKWGF
Sbjct: 134 KFPGRQKIYVSKKWGF 149
Score = 63.7 bits (148), Expect = 1e-09
Identities = 26/43 (60%), Positives = 34/43 (79%)
Frame = +1
Query: 238 KEVGFQKYERDEFEKLREEGRLANDGCIVQYRPEHGPLDAWRK 366
K+ GF KY+R +E+L+ + RLA DGC V+Y PEHGPLDAW+K
Sbjct: 145 KKWGFTKYDRAVYEQLKTDCRLAQDGCNVKYLPEHGPLDAWKK 187
>UniRef50_Q5B047 Cluster: Putative uncharacterized protein; n=1;
Emericella nidulans|Rep: Putative uncharacterized
protein - Emericella nidulans (Aspergillus nidulans)
Length = 250
Score = 144 bits (348), Expect = 6e-34
Identities = 67/84 (79%), Positives = 73/84 (86%)
Frame = +2
Query: 2 RLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVRIGQPIMSVRSSDRWKAQVI 181
R+HPFHVIRINKMLSCAGADRLQTGMRGAFGKPQG VARV IGQ I+SVR+ D +A I
Sbjct: 119 RVHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGKVARVNIGQIILSVRTRDSHRATAI 178
Query: 182 EALRRAKFKFPGRQKIYVSKKWGF 253
EALRR+ +KFPGRQKI VSK WGF
Sbjct: 179 EALRRSMYKFPGRQKIIVSKNWGF 202
Score = 38.7 bits (86), Expect = 0.034
Identities = 17/48 (35%), Positives = 27/48 (56%)
Frame = +1
Query: 211 PRTSKDLRIKEVGFQKYERDEFEKLREEGRLANDGCIVQYRPEHGPLD 354
P K + K GF R+++ +LR+EG+L DG VQ+ HG ++
Sbjct: 189 PGRQKIIVSKNWGFTPVRREDYVQLRQEGKLKQDGAYVQFLRGHGQIE 236
>UniRef50_Q9M5M7 Cluster: 60S ribosomal protein L10; n=52;
Eukaryota|Rep: 60S ribosomal protein L10 - Euphorbia
esula (Leafy spurge)
Length = 220
Score = 142 bits (344), Expect = 2e-33
Identities = 66/88 (75%), Positives = 72/88 (81%)
Frame = +2
Query: 2 RLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVRIGQPIMSVRSSDRWKAQVI 181
R+HPFHV+RINKMLSCAGADRLQTGMRGAFGKPQG ARV IGQ ++SVR D
Sbjct: 90 RVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGVCARVAIGQVLLSVRCKDNNSHNAQ 149
Query: 182 EALRRAKFKFPGRQKIYVSKKWGFKSMN 265
EALRRAKFKFPGRQKI VS+KWGF +N
Sbjct: 150 EALRRAKFKFPGRQKIIVSRKWGFTKIN 177
>UniRef50_UPI0000499E88 Cluster: 60S ribosomal protein L10; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L10 - Entamoeba histolytica HM-1:IMSS
Length = 190
Score = 116 bits (278), Expect = 2e-25
Identities = 51/84 (60%), Positives = 67/84 (79%)
Frame = +2
Query: 2 RLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVRIGQPIMSVRSSDRWKAQVI 181
R+HPFHV+RINKMLSCAGADRLQTGMRGA+GK G+ ARV++GQ ++S R ++ +I
Sbjct: 70 RIHPFHVLRINKMLSCAGADRLQTGMRGAWGKSYGSCARVKVGQVLISGRCKEQHLPAMI 129
Query: 182 EALRRAKFKFPGRQKIYVSKKWGF 253
++ R A +KF GRQK+ +S KWGF
Sbjct: 130 KSFRLACYKFAGRQKLVISNKWGF 153
Score = 38.3 bits (85), Expect = 0.045
Identities = 13/35 (37%), Positives = 24/35 (68%)
Frame = +1
Query: 247 GFQKYERDEFEKLREEGRLANDGCIVQYRPEHGPL 351
GF KY ++E+++L+++G++ DGC + GPL
Sbjct: 152 GFTKYTKEEYQQLKKDGKIIADGCYFKLATTKGPL 186
>UniRef50_UPI0000DD7A8E Cluster: PREDICTED: similar to ribosomal
protein L10; n=2; Homo sapiens|Rep: PREDICTED: similar
to ribosomal protein L10 - Homo sapiens
Length = 235
Score = 105 bits (253), Expect = 2e-22
Identities = 50/68 (73%), Positives = 55/68 (80%)
Frame = +2
Query: 62 RLQTGMRGAFGKPQGTVARVRIGQPIMSVRSSDRWKAQVIEALRRAKFKFPGRQKIYVSK 241
RLQTGMRGAFG PQGTVARV IGQ IMS+R+ + K VIEALRRAKFK PG QKI++SK
Sbjct: 131 RLQTGMRGAFGMPQGTVARVHIGQVIMSIRTKLQNKEHVIEALRRAKFKLPGHQKIHISK 190
Query: 242 KWGFKSMN 265
KWGF N
Sbjct: 191 KWGFTKFN 198
Score = 52.4 bits (120), Expect = 3e-06
Identities = 23/45 (51%), Positives = 28/45 (62%)
Frame = +1
Query: 238 KEVGFQKYERDEFEKLREEGRLANDGCIVQYRPEHGPLDAWRKVH 372
K+ GF K+ DEFE + E L DGC V+Y P GPLD WR +H
Sbjct: 190 KKWGFTKFNADEFEDMVAEKWLIPDGCGVKYIPNRGPLDKWRALH 234
>UniRef50_UPI0000EBD477 Cluster: PREDICTED: similar to ribosomal
protein L10; n=1; Bos taurus|Rep: PREDICTED: similar to
ribosomal protein L10 - Bos taurus
Length = 240
Score = 105 bits (252), Expect = 3e-22
Identities = 51/76 (67%), Positives = 58/76 (76%)
Frame = +2
Query: 62 RLQTGMRGAFGKPQGTVARVRIGQPIMSVRSSDRWKAQVIEALRRAKFKFPGRQKIYVSK 241
RLQTGMRGAFGKPQGT+ARV IGQ IMS+R+ + K VIEALR AKFKFPG QKI++SK
Sbjct: 34 RLQTGMRGAFGKPQGTMARVHIGQVIMSIRTKLQNKEHVIEALRWAKFKFPGCQKIHISK 93
Query: 242 KWGFKSMNVMSLRSCV 289
KWGF N + V
Sbjct: 94 KWGFTKFNTDEFENMV 109
Score = 37.5 bits (83), Expect = 0.079
Identities = 17/33 (51%), Positives = 21/33 (63%)
Frame = +1
Query: 238 KEVGFQKYERDEFEKLREEGRLANDGCIVQYRP 336
K+ GF K+ DEFE + E RL DGC V+Y P
Sbjct: 93 KKWGFTKFNTDEFENMVAEKRLIPDGCGVKYIP 125
>UniRef50_UPI0000D9B764 Cluster: PREDICTED: similar to 60S ribosomal
protein L10 (QM protein) (Tumor suppressor QM) (Laminin
receptor homolog); n=1; Macaca mulatta|Rep: PREDICTED:
similar to 60S ribosomal protein L10 (QM protein) (Tumor
suppressor QM) (Laminin receptor homolog) - Macaca
mulatta
Length = 305
Score = 104 bits (250), Expect = 5e-22
Identities = 51/80 (63%), Positives = 60/80 (75%)
Frame = +2
Query: 50 AGADRLQTGMRGAFGKPQGTVARVRIGQPIMSVRSSDRWKAQVIEALRRAKFKFPGRQKI 229
AG DRL+TGM+GAFGK QGTVARVRI Q IMS+ + + K +IEALRRAKFKFPG QKI
Sbjct: 197 AGPDRLRTGMQGAFGKSQGTVARVRIAQVIMSICTKLQNKEYMIEALRRAKFKFPGHQKI 256
Query: 230 YVSKKWGFKSMNVMSLRSCV 289
++SKKWGF N + V
Sbjct: 257 HISKKWGFIKFNADAFEDMV 276
Score = 46.0 bits (104), Expect = 2e-04
Identities = 20/45 (44%), Positives = 28/45 (62%)
Frame = +1
Query: 238 KEVGFQKYERDEFEKLREEGRLANDGCIVQYRPEHGPLDAWRKVH 372
K+ GF K+ D FE + E +L DGC V+Y P GPL+ W+ +H
Sbjct: 260 KKWGFIKFNADAFEDMVAEKQLIPDGCGVKYIPSCGPLNKWQALH 304
>UniRef50_UPI00006C12B9 Cluster: PREDICTED: similar to ribosomal
protein L10; n=11; Eutheria|Rep: PREDICTED: similar to
ribosomal protein L10 - Homo sapiens
Length = 118
Score = 102 bits (245), Expect = 2e-21
Identities = 49/76 (64%), Positives = 55/76 (72%)
Frame = +2
Query: 62 RLQTGMRGAFGKPQGTVARVRIGQPIMSVRSSDRWKAQVIEALRRAKFKFPGRQKIYVSK 241
R QTGMRGAFGKPQGTVARV GQ I+S+ + + K VIEALRRAKFKF GRQKI++SK
Sbjct: 14 RFQTGMRGAFGKPQGTVARVHTGQVIISIHTKLQNKEHVIEALRRAKFKFSGRQKIHISK 73
Query: 242 KWGFKSMNVMSLRSCV 289
KWGF N V
Sbjct: 74 KWGFTKFNANEFEDMV 89
Score = 49.6 bits (113), Expect = 2e-05
Identities = 21/45 (46%), Positives = 28/45 (62%)
Frame = +1
Query: 238 KEVGFQKYERDEFEKLREEGRLANDGCIVQYRPEHGPLDAWRKVH 372
K+ GF K+ +EFE + E RL DGC V+Y GP+D WR +H
Sbjct: 73 KKWGFTKFNANEFEDMVTEKRLIPDGCRVKYISNRGPVDKWRALH 117
>UniRef50_Q3LW95 Cluster: Ribosomal protein L10e; n=1; Bigelowiella
natans|Rep: Ribosomal protein L10e - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 193
Score = 96.3 bits (229), Expect = 2e-19
Identities = 46/102 (45%), Positives = 64/102 (62%)
Frame = +2
Query: 2 RLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVRIGQPIMSVRSSDRWKAQVI 181
++HP H++R NKMLS AGADR+QTGMR +FGKP+ ARV+ + I+SVR + + VI
Sbjct: 90 KMHPLHILRNNKMLSRAGADRVQTGMRNSFGKPESICARVKKNKSILSVRCRYKDEDNVI 149
Query: 182 EALRRAKFKFPGRQKIYVSKKWGFKSMNVMSLRSCVKRAASL 307
AL++A +K G Q I +SK WGF +K+ L
Sbjct: 150 NALKQACYKVSGFQIIQISKNWGFTKFKSQQFIEYIKKGKKL 191
>UniRef50_Q58DU2 Cluster: Similar to 60S ribosomal protein L10; n=1;
Bos taurus|Rep: Similar to 60S ribosomal protein L10 -
Bos taurus (Bovine)
Length = 176
Score = 95.9 bits (228), Expect = 2e-19
Identities = 57/102 (55%), Positives = 67/102 (65%), Gaps = 4/102 (3%)
Frame = +2
Query: 62 RLQTGMRGAFGKPQGTVARVRIGQPIMSVRSSDRWKAQVIEALRRAKFKFPGRQKIYVSK 241
RLQTGMRGAFGKPQGTVARV IGQ IMS+R+ + K VIEALRRAKFKFPGRQK+
Sbjct: 32 RLQTGMRGAFGKPQGTVARVHIGQVIMSIRTKLQNKEHVIEALRRAKFKFPGRQKVRSIA 91
Query: 242 KWG----FKSMNVMSLRSCVKRAASLMTAALCSTARNMDLST 355
W S + L + R+ SL + L S+ R M+L T
Sbjct: 92 AWVSPLLLASGPMTQLFLSLSRSTSLRSGDLPSSTR-MNLRT 132
>UniRef50_UPI0000DD7887 Cluster: PREDICTED: similar to 60S ribosomal
protein L10 (QM protein) (Tumor suppressor QM) (Laminin
receptor homolog); n=1; Homo sapiens|Rep: PREDICTED:
similar to 60S ribosomal protein L10 (QM protein) (Tumor
suppressor QM) (Laminin receptor homolog) - Homo sapiens
Length = 283
Score = 94.3 bits (224), Expect = 7e-19
Identities = 47/78 (60%), Positives = 55/78 (70%), Gaps = 4/78 (5%)
Frame = +2
Query: 44 SCAGAD----RLQTGMRGAFGKPQGTVARVRIGQPIMSVRSSDRWKAQVIEALRRAKFKF 211
SC+GA RLQTGM+ AFGKPQGTVARV IGQ IM + + + K VI AL R FKF
Sbjct: 169 SCSGAGPSRCRLQTGMQVAFGKPQGTVARVHIGQVIMFIHTKLQNKEHVIGALHRVTFKF 228
Query: 212 PGRQKIYVSKKWGFKSMN 265
PG QK+++SKKWGF N
Sbjct: 229 PGHQKVHISKKWGFTKFN 246
Score = 48.0 bits (109), Expect = 6e-05
Identities = 20/45 (44%), Positives = 30/45 (66%)
Frame = +1
Query: 238 KEVGFQKYERDEFEKLREEGRLANDGCIVQYRPEHGPLDAWRKVH 372
K+ GF K+ DEFE + E +L+ DGC V+ P HGPL+ W+ ++
Sbjct: 238 KKWGFTKFNADEFEYVVAEKQLSPDGCGVKSIPSHGPLEKWQALY 282
>UniRef50_UPI0000EBF019 Cluster: PREDICTED: similar to ribosomal
protein L10; n=1; Bos taurus|Rep: PREDICTED: similar to
ribosomal protein L10 - Bos taurus
Length = 289
Score = 93.5 bits (222), Expect = 1e-18
Identities = 46/76 (60%), Positives = 55/76 (72%)
Frame = +2
Query: 41 LSCAGADRLQTGMRGAFGKPQGTVARVRIGQPIMSVRSSDRWKAQVIEALRRAKFKFPGR 220
L+C RLQTGM AFGK QG VARV Q IMS+ +S + K V EALRRAK +FPGR
Sbjct: 195 LACWSQSRLQTGMCAAFGKTQGEVARVHTSQVIMSIHTSLQNKEHVTEALRRAKVQFPGR 254
Query: 221 QKIYVSKKWGFKSMNV 268
QKI++SKKWGF ++V
Sbjct: 255 QKIHISKKWGFIKVHV 270
>UniRef50_UPI0000EB0151 Cluster: UPI0000EB0151 related cluster; n=1;
Canis lupus familiaris|Rep: UPI0000EB0151 UniRef100
entry - Canis familiaris
Length = 145
Score = 87.4 bits (207), Expect = 7e-17
Identities = 43/69 (62%), Positives = 51/69 (73%)
Frame = +2
Query: 62 RLQTGMRGAFGKPQGTVARVRIGQPIMSVRSSDRWKAQVIEALRRAKFKFPGRQKIYVSK 241
RLQTGMRG FGKPQGTVARV GQ IMS+ + + K VIEA RAKFK PGRQKIY+SK
Sbjct: 27 RLQTGMRGGFGKPQGTVARVHTGQAIMSICTKLQNKEHVIEAQCRAKFKLPGRQKIYISK 86
Query: 242 KWGFKSMNV 268
+ ++ +
Sbjct: 87 NLMWTNLKI 95
>UniRef50_UPI00005A4DCE Cluster: PREDICTED: similar to ribosomal
protein L10; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L10 - Canis familiaris
Length = 245
Score = 85.4 bits (202), Expect = 3e-16
Identities = 42/67 (62%), Positives = 49/67 (73%)
Frame = +2
Query: 68 QTGMRGAFGKPQGTVARVRIGQPIMSVRSSDRWKAQVIEALRRAKFKFPGRQKIYVSKKW 247
Q ++GAFGKPQGTVAR IGQ IMS+ + + K VIEAL RAKFKFP QKI+ SKKW
Sbjct: 143 QLSIQGAFGKPQGTVARGHIGQVIMSICTKLQNKEHVIEALHRAKFKFPDCQKIHSSKKW 202
Query: 248 GFKSMNV 268
G+ NV
Sbjct: 203 GYTKFNV 209
Score = 41.1 bits (92), Expect = 0.006
Identities = 18/45 (40%), Positives = 26/45 (57%)
Frame = +1
Query: 238 KEVGFQKYERDEFEKLREEGRLANDGCIVQYRPEHGPLDAWRKVH 372
K+ G+ K+ D FE + E +L DGC ++Y P G LD W +H
Sbjct: 200 KKWGYTKFNVDGFEDMVAEKQLIPDGCGIKYIPNRGFLDKWWALH 244
>UniRef50_O27191 Cluster: 50S ribosomal protein L10e; n=6;
Euryarchaeota|Rep: 50S ribosomal protein L10e -
Methanobacterium thermoautotrophicum
Length = 160
Score = 73.3 bits (172), Expect = 1e-12
Identities = 36/80 (45%), Positives = 52/80 (65%)
Frame = +2
Query: 2 RLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVRIGQPIMSVRSSDRWKAQVI 181
R++P H++R N M + AGADR+Q GMR AFGKP TVA V+ Q I+++ ++ +
Sbjct: 75 RVYPHHIVRENPMATGAGADRVQDGMRKAFGKPVSTVALVKKNQKIITIETNKKNFKDAK 134
Query: 182 EALRRAKFKFPGRQKIYVSK 241
EALRRA KFP +I + +
Sbjct: 135 EALRRAAMKFPVPCRIVIDR 154
>UniRef50_Q8ISR4 Cluster: QM protein; n=16; Coelomata|Rep: QM
protein - Spodoptera frugiperda (Fall armyworm)
Length = 52
Score = 70.1 bits (164), Expect = 1e-11
Identities = 29/37 (78%), Positives = 33/37 (89%)
Frame = +1
Query: 238 KEVGFQKYERDEFEKLREEGRLANDGCIVQYRPEHGP 348
K+ GF KYER+EFEKLRE+GRL NDGC V+YRPEHGP
Sbjct: 16 KKWGFTKYEREEFEKLREDGRLTNDGCNVKYRPEHGP 52
Score = 48.8 bits (111), Expect = 3e-05
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = +2
Query: 194 RAKFKFPGRQKIYVSKKWGF 253
RAKFKFPGRQKIYVSKKWGF
Sbjct: 1 RAKFKFPGRQKIYVSKKWGF 20
>UniRef50_Q8ZSV4 Cluster: 50S ribosomal protein L10e; n=9;
Thermoprotei|Rep: 50S ribosomal protein L10e -
Pyrobaculum aerophilum
Length = 180
Score = 69.7 bits (163), Expect = 2e-11
Identities = 37/78 (47%), Positives = 44/78 (56%)
Frame = +2
Query: 11 PFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVRIGQPIMSVRSSDRWKAQVIEAL 190
P HV+R N+ML+ AGADRLQ GMR AFG P G ARV GQ + + EAL
Sbjct: 94 PHHVLRENRMLAMAGADRLQEGMRLAFGSPAGRAARVEPGQVLFYAEFKPEHLPHIKEAL 153
Query: 191 RRAKFKFPGRQKIYVSKK 244
RRA K P +I + K
Sbjct: 154 RRAASKLPLPTRIVIEPK 171
>UniRef50_UPI00015BAE8F Cluster: LSU ribosomal protein L10AE; n=1;
Ignicoccus hospitalis KIN4/I|Rep: LSU ribosomal protein
L10AE - Ignicoccus hospitalis KIN4/I
Length = 173
Score = 68.9 bits (161), Expect = 3e-11
Identities = 34/69 (49%), Positives = 46/69 (66%)
Frame = +2
Query: 8 HPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVRIGQPIMSVRSSDRWKAQVIEA 187
+P HV+R +K ++ AGADRLQ GMR AFGKP G AR+ G I+ VR+ ++ +V EA
Sbjct: 93 YPHHVLREHKFMAFAGADRLQEGMRHAFGKPAGLAARIYPGMDILVVRTKKQYVDKVKEA 152
Query: 188 LRRAKFKFP 214
L+ A K P
Sbjct: 153 LKIAASKMP 161
>UniRef50_Q6LXR0 Cluster: 50S ribosomal protein L10e; n=3;
Methanococcus maripaludis|Rep: 50S ribosomal protein
L10e - Methanococcus maripaludis
Length = 173
Score = 67.3 bits (157), Expect = 9e-11
Identities = 35/80 (43%), Positives = 49/80 (61%)
Frame = +2
Query: 2 RLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVRIGQPIMSVRSSDRWKAQVI 181
R++P ++R NKM + AGADR+ GMR +FGK GT A+V+ GQ I+++ +
Sbjct: 87 RVYPHEILRENKMAAGAGADRISDGMRLSFGKAVGTAAKVKKGQEIITIGVNPEKFYAAK 146
Query: 182 EALRRAKFKFPGRQKIYVSK 241
EALRR K P KI V+K
Sbjct: 147 EALRRCSMKLPTACKIVVTK 166
>UniRef50_P58299 Cluster: 50S ribosomal protein L10e; n=9;
Archaea|Rep: 50S ribosomal protein L10e - Thermoplasma
volcanium
Length = 176
Score = 66.5 bits (155), Expect = 1e-10
Identities = 33/78 (42%), Positives = 49/78 (62%)
Frame = +2
Query: 8 HPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVRIGQPIMSVRSSDRWKAQVIEA 187
+P HV+R +KM + AGADR+ +GMR AFG+P GT ARV IM R+ + ++ A
Sbjct: 89 YPHHVLREHKMATGAGADRISSGMRAAFGRPVGTAARVYQNDVIMIGRTDEAHAHELKIA 148
Query: 188 LRRAKFKFPGRQKIYVSK 241
L++A K P K+ ++K
Sbjct: 149 LKKAAIKLPTPCKVVITK 166
>UniRef50_Q96YA4 Cluster: 50S ribosomal protein L10e; n=4;
Sulfolobaceae|Rep: 50S ribosomal protein L10e -
Sulfolobus tokodaii
Length = 176
Score = 64.5 bits (150), Expect = 6e-10
Identities = 36/75 (48%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Frame = +2
Query: 8 HPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARV-RIGQPIMSVRSSDRWKAQVIE 184
+P HVIR NKM++ AGADRLQ GMR +FGKP GT AR+ R+G IM + +
Sbjct: 90 YPHHVIRENKMMAFAGADRLQDGMRLSFGKPIGTAARIERLGDIIMIAKVKKEHLEIAKK 149
Query: 185 ALRRAKFKFPGRQKI 229
A A K P + KI
Sbjct: 150 AFEAAASKIPLKTKI 164
>UniRef50_A7I691 Cluster: Ribosomal protein L10E; n=5; Archaea|Rep:
Ribosomal protein L10E - Methanoregula boonei (strain
6A8)
Length = 248
Score = 64.1 bits (149), Expect = 8e-10
Identities = 33/71 (46%), Positives = 44/71 (61%)
Frame = +2
Query: 2 RLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVRIGQPIMSVRSSDRWKAQVI 181
R+ P HV+R NK + AGADR+ GMR AFGK GT ARV GQ + +V ++ ++ +V
Sbjct: 87 RVFPHHVLRENKQATGAGADRVSEGMRLAFGKAVGTAARVEAGQLLFTVFTTAQYLDKVK 146
Query: 182 EALRRAKFKFP 214
ALR K P
Sbjct: 147 AALRNGSHKLP 157
>UniRef50_Q01C82 Cluster: 3'-5' exonuclease, putative; n=3;
Ostreococcus|Rep: 3'-5' exonuclease, putative -
Ostreococcus tauri
Length = 1013
Score = 62.9 bits (146), Expect = 2e-09
Identities = 36/84 (42%), Positives = 49/84 (58%)
Frame = -2
Query: 253 ETPLL*YVDLLTSGELELGTAQSLDDLCLPPVTRAHGHDGLSNANTCYSTLRLAKRTTHP 74
ETP+L +LL + EL LG A+ LD L + R +G L+N + +TLR RTTH
Sbjct: 889 ETPVLRLHNLLATRELVLGAAERLDGLVRVHILRTNGQHDLANRHPRGNTLRGTVRTTHT 948
Query: 73 SLEPISSSA**HFIDADNVERVKS 2
L+ I A H +DA NVERV++
Sbjct: 949 RLQAIRPGARQHLVDAQNVERVQA 972
>UniRef50_Q2FLD3 Cluster: Ribosomal protein L10.e; n=3;
Methanomicrobia|Rep: Ribosomal protein L10.e -
Methanospirillum hungatei (strain JF-1 / DSM 864)
Length = 170
Score = 62.1 bits (144), Expect = 3e-09
Identities = 33/81 (40%), Positives = 45/81 (55%)
Frame = +2
Query: 2 RLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVRIGQPIMSVRSSDRWKAQVI 181
R +P HV+R NK + AGADR+ GMR AFGK GT AR + Q I +V S+ ++
Sbjct: 87 RTYPHHVLRENKQATGAGADRVSQGMRLAFGKAVGTAARCQQNQKIFTVFSNPASVEKIK 146
Query: 182 EALRRAKFKFPGRQKIYVSKK 244
+ALR K P + + K
Sbjct: 147 DALRHGGHKLPSPTHLVIEMK 167
>UniRef50_UPI00005A4DCA Cluster: PREDICTED: similar to ribosomal
protein L10; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L10 - Canis familiaris
Length = 171
Score = 61.7 bits (143), Expect = 4e-09
Identities = 32/84 (38%), Positives = 44/84 (52%)
Frame = +2
Query: 17 HVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVRIGQPIMSVRSSDRWKAQVIEALRR 196
H+ M+ G D + + G P+ R G I+S+ + + K +IE L R
Sbjct: 52 HICSSKYMVKSCGKDGSRKVCQVPLGSPRAQWPRAHTGHVIVSICTKLKDKEWLIEVLYR 111
Query: 197 AKFKFPGRQKIYVSKKWGFKSMNV 268
AKFKFPG QK++ SKKWGF NV
Sbjct: 112 AKFKFPGCQKLHNSKKWGFTKFNV 135
Score = 47.2 bits (107), Expect = 1e-04
Identities = 21/45 (46%), Positives = 27/45 (60%)
Frame = +1
Query: 238 KEVGFQKYERDEFEKLREEGRLANDGCIVQYRPEHGPLDAWRKVH 372
K+ GF K+ D FE + E L DGC V+Y P HGPL+ W +H
Sbjct: 126 KKWGFTKFNVDGFEDMVTEKPLIPDGCGVKYIPTHGPLEKWWALH 170
>UniRef50_Q9UWP5 Cluster: 50S ribosomal protein L10e; n=4;
Thermococcaceae|Rep: 50S ribosomal protein L10e -
Pyrococcus furiosus
Length = 181
Score = 61.7 bits (143), Expect = 4e-09
Identities = 32/71 (45%), Positives = 42/71 (59%)
Frame = +2
Query: 2 RLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVRIGQPIMSVRSSDRWKAQVI 181
R++PF V+R N M + ADR GMR FGKP G AR++ Q I+S+R + + I
Sbjct: 87 RVYPFQVLRENPMATGRKADRYGNGMRRPFGKPIGLAARLKKDQKILSIRVNRQHLKFAI 146
Query: 182 EALRRAKFKFP 214
E RRA KFP
Sbjct: 147 EGARRAAMKFP 157
>UniRef50_A0RWP6 Cluster: Ribosomal protein L16/L10E; n=2;
Thermoprotei|Rep: Ribosomal protein L16/L10E -
Cenarchaeum symbiosum
Length = 170
Score = 59.7 bits (138), Expect = 2e-08
Identities = 34/78 (43%), Positives = 43/78 (55%)
Frame = +2
Query: 2 RLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVRIGQPIMSVRSSDRWKAQVI 181
R++P ++R NKM++ AGADRLQ GMR A+GK ARVR GQ I
Sbjct: 83 RIYPHVLLRENKMIATAGADRLQEGMRRAWGKAVSLGARVRQGQVIYEAHVRKEHLEHTK 142
Query: 182 EALRRAKFKFPGRQKIYV 235
+AL+ A K PG I V
Sbjct: 143 KALKHACVKLPGTPTIRV 160
>UniRef50_P60617 Cluster: 50S ribosomal protein L10e; n=9;
Euryarchaeota|Rep: 50S ribosomal protein L10e -
Haloarcula marismortui (Halobacterium marismortui)
Length = 177
Score = 56.8 bits (131), Expect = 1e-07
Identities = 33/80 (41%), Positives = 43/80 (53%)
Frame = +2
Query: 2 RLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVRIGQPIMSVRSSDRWKAQVI 181
R P V+R NK + AGADR+ GMR AFGK GT ARV+ G+ + + + V
Sbjct: 91 RKFPHQVLRENKQATGAGADRVSDGMRAAFGKIVGTAARVQAGEQLFTAYCNVEDAEHVK 150
Query: 182 EALRRAKFKFPGRQKIYVSK 241
EA RRA K +I V +
Sbjct: 151 EAFRRAYNKITPSCRIKVER 170
>UniRef50_Q74M84 Cluster: 50S ribosomal protein L10e; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L10e -
Nanoarchaeum equitans
Length = 186
Score = 48.8 bits (111), Expect = 3e-05
Identities = 27/77 (35%), Positives = 46/77 (59%), Gaps = 2/77 (2%)
Frame = +2
Query: 2 RLHPFHVIRINKMLS-CAGADRLQTGMRGAFGKPQGTVARVRIGQPIMSVRSSDRWKAQV 178
R +P H+ R ++ AGADR+ GMR +FG+P+G ++ G+ ++S+ D KA+
Sbjct: 96 RKYPHHIYREKPVVGGYAGADRISQGMRLSFGRPKGRAVQIYEGEKLLSIFFDDITKAKD 155
Query: 179 IE-ALRRAKFKFPGRQK 226
I+ L+ A+ K P R +
Sbjct: 156 IKYFLQVARSKLPWRYR 172
>UniRef50_A4H504 Cluster: Putative uncharacterized protein; n=1;
Leishmania braziliensis|Rep: Putative uncharacterized
protein - Leishmania braziliensis
Length = 820
Score = 33.9 bits (74), Expect = 0.98
Identities = 19/37 (51%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
Frame = -2
Query: 364 SSKRREVHVPGGTAQCSRH*RGGPLHAASQTH--HVH 260
SS R H G T +H R GPL AA QTH HVH
Sbjct: 538 SSSSRLNHHQGDTRNSRQHHRSGPLDAALQTHGRHVH 574
>UniRef50_Q0J7R7 Cluster: Os08g0168700 protein; n=6; Oryza
sativa|Rep: Os08g0168700 protein - Oryza sativa subsp.
japonica (Rice)
Length = 694
Score = 33.5 bits (73), Expect = 1.3
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +2
Query: 149 RSSDRWKAQVIEALRRAKFKFPGRQKIYVSKKWGFKSMNV 268
R++ RWKAQ A RR + Q +YV+ K+ ++S ++
Sbjct: 643 RAAARWKAQAEAAARRGGSSYENLQSMYVNHKYTYESWDI 682
>UniRef50_Q9RWX3 Cluster: Glycerophosphoryl diester
phosphodiesterase, putative; n=2; Deinococcus|Rep:
Glycerophosphoryl diester phosphodiesterase, putative -
Deinococcus radiodurans
Length = 225
Score = 32.7 bits (71), Expect = 2.3
Identities = 18/55 (32%), Positives = 25/55 (45%)
Frame = -3
Query: 195 RRRASMTCAFHLSLERTDMMGCPMRTRATVP*GLPNAPRIPVWSLSAPAHDNILL 31
RR A T A H D P TRA +P +P P + W++ A+ N+ L
Sbjct: 38 RRLADGTLAVHHDAALPDGRQLPHLTRAELPERVPTLPEVLAWAVDCEAYVNLEL 92
>UniRef50_A3YU04 Cluster: Putative uncharacterized protein; n=1;
Synechococcus sp. WH 5701|Rep: Putative uncharacterized
protein - Synechococcus sp. WH 5701
Length = 547
Score = 31.9 bits (69), Expect = 3.9
Identities = 15/60 (25%), Positives = 35/60 (58%)
Frame = +2
Query: 92 GKPQGTVARVRIGQPIMSVRSSDRWKAQVIEALRRAKFKFPGRQKIYVSKKWGFKSMNVM 271
GKP TV R+ + + + ++ W+ +++EAL + + + RQ Y+ ++ G +S+ ++
Sbjct: 106 GKPLLTVTRLDVAEGLSLQDQAETWRRRLVEALEQGRLQ---RQPAYI-RRMGLRSLALL 161
>UniRef50_Q8YPE7 Cluster: Alr4247 protein; n=5; Cyanobacteria|Rep:
Alr4247 protein - Anabaena sp. (strain PCC 7120)
Length = 518
Score = 31.5 bits (68), Expect = 5.2
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = -2
Query: 199 GTAQSLDDLCLPPVTRAHGHDGLSNANTCYSTLRLA 92
G +L+D+C+ A HD LS A Y +LRLA
Sbjct: 383 GVNAALEDVCVLNEALAQSHDNLSQALPLYESLRLA 418
>UniRef50_UPI0000E252AC Cluster: PREDICTED: hypothetical protein;
n=1; Pan troglodytes|Rep: PREDICTED: hypothetical
protein - Pan troglodytes
Length = 201
Score = 31.1 bits (67), Expect = 6.9
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = -3
Query: 138 MGCPMRTRATVP*GLPNAPRIPVWSLSAPAHDNILLMRI 22
+ CP+ P LP+ P +W+L + A LL+RI
Sbjct: 158 LNCPLAAPQLAPRALPDLPTFCIWALHSLASSRPLLLRI 196
>UniRef50_Q8IM18 Cluster: Putative uncharacterized protein; n=1;
Plasmodium falciparum 3D7|Rep: Putative uncharacterized
protein - Plasmodium falciparum (isolate 3D7)
Length = 2033
Score = 31.1 bits (67), Expect = 6.9
Identities = 11/31 (35%), Positives = 22/31 (70%)
Frame = +1
Query: 220 SKDLRIKEVGFQKYERDEFEKLREEGRLAND 312
+KD ++K V ++ +++EK++E G+L ND
Sbjct: 1573 NKDQQVKSVNSEEIHFEKYEKIQENGKLLND 1603
>UniRef50_Q2UIX8 Cluster: Predicted protein; n=1; Aspergillus
oryzae|Rep: Predicted protein - Aspergillus oryzae
Length = 739
Score = 31.1 bits (67), Expect = 6.9
Identities = 15/52 (28%), Positives = 26/52 (50%)
Frame = +2
Query: 116 RVRIGQPIMSVRSSDRWKAQVIEALRRAKFKFPGRQKIYVSKKWGFKSMNVM 271
++R GQ +S S Q+ L FK+ +V K+W F+++NV+
Sbjct: 101 QLRSGQSHLSAAISSCPPRQIARFLANTFFKYAETHYFFVQKRWFFENLNVL 152
>UniRef50_A6LH78 Cluster: Putative outer membrane protein, probably
involved in nutrient binding; n=2; Parabacteroides|Rep:
Putative outer membrane protein, probably involved in
nutrient binding - Parabacteroides distasonis (strain
ATCC 8503 / DSM 20701 / NCTC11152)
Length = 1077
Score = 30.7 bits (66), Expect = 9.1
Identities = 18/49 (36%), Positives = 25/49 (51%)
Frame = +2
Query: 11 PFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVRIGQPIMSVRSS 157
P H + N +S G D T MRGAFG + R++ G P+M R +
Sbjct: 925 PKHYLNWNNSISWKGFDFSVT-MRGAFGFDILNMPRLQYGAPVMLARGN 972
>UniRef50_A1TH01 Cluster: Putative uncharacterized protein; n=2;
Mycobacterium|Rep: Putative uncharacterized protein -
Mycobacterium vanbaalenii (strain DSM 7251 / PYR-1)
Length = 271
Score = 30.7 bits (66), Expect = 9.1
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +2
Query: 11 PFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVA 115
P HV+ L AGAD +Q + GA G+P G A
Sbjct: 228 PRHVLDHAARLHAAGADHVQLNVLGADGQPTGVAA 262
>UniRef50_Q8I6J5 Cluster: Fibroblast growth factor 8/17/18; n=1;
Ciona intestinalis|Rep: Fibroblast growth factor 8/17/18
- Ciona intestinalis (Transparent sea squirt)
Length = 414
Score = 30.7 bits (66), Expect = 9.1
Identities = 21/66 (31%), Positives = 34/66 (51%)
Frame = +1
Query: 106 YCSTCSHWTAHHVRAL**QVEGTGHRGSAPCQVQVPRTSKDLRIKEVGFQKYERDEFEKL 285
YC S T++H+R L +V+G G RGS ++ + SK L + Q + + F +
Sbjct: 57 YCEIYSKRTSNHIRILGKKVDGRGRRGSNHAKLII--HSKGL-WGRIMIQGVQTERFLCM 113
Query: 286 REEGRL 303
+ GRL
Sbjct: 114 NKRGRL 119
>UniRef50_Q4P549 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 1247
Score = 30.7 bits (66), Expect = 9.1
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = +3
Query: 21 LSASIKCYHALELIGSRLGCVVRLASLRVL*HVFALDSPSC 143
+SAS+ ++AL ++ +L VV LA L L A S SC
Sbjct: 942 VSASVSSFYALSIVKGKLAAVVLLACLAFLVTTQAAQSDSC 982
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 408,161,871
Number of Sequences: 1657284
Number of extensions: 8006518
Number of successful extensions: 23639
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 23076
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23634
length of database: 575,637,011
effective HSP length: 91
effective length of database: 424,824,167
effective search space used: 14019197511
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -