Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10944X
         (374 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    23   0.89 
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              20   8.3  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    20   8.3  

>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 23.4 bits (48), Expect = 0.89
 Identities = 8/30 (26%), Positives = 18/30 (60%)
 Frame = +2

Query: 257 SMNVMSLRSCVKRAASLMTAALCSTARNMD 346
           ++N+++   C K   ++M  A+C+ A+  D
Sbjct: 314 TLNMLTQVECYKYYGNIMVNAMCAYAKGKD 343


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 20.2 bits (40), Expect = 8.3
 Identities = 10/35 (28%), Positives = 18/35 (51%)
 Frame = +1

Query: 220 SKDLRIKEVGFQKYERDEFEKLREEGRLANDGCIV 324
           S+D+ ++ V  Q Y+ D  ++    G  A   C+V
Sbjct: 92  SRDVNVRAVVAQYYDTDVNKEYAIRGNSAILKCVV 126


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 20.2 bits (40), Expect = 8.3
 Identities = 9/21 (42%), Positives = 10/21 (47%)
 Frame = -3

Query: 159 SLERTDMMGCPMRTRATVP*G 97
           SLER D  GC       +P G
Sbjct: 572 SLERFDFCGCGWPQHMLIPKG 592


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,616
Number of Sequences: 438
Number of extensions: 2035
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  9052365
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)