Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10940
         (635 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF230521-1|AAF36974.2|  185|Anopheles gambiae homeobox transcrip...    24   3.5  
AJ439353-6|CAD27928.1|  695|Anopheles gambiae putative G-protein...    23   6.1  

>AF230521-1|AAF36974.2|  185|Anopheles gambiae homeobox
           transcription factor protein.
          Length = 185

 Score = 24.2 bits (50), Expect = 3.5
 Identities = 10/34 (29%), Positives = 16/34 (47%)
 Frame = -3

Query: 201 SMYLFVGISVKPISKNISRNSDLTFKRGWR*PHS 100
           S  L +  S   +++ + R+ D     GW  PHS
Sbjct: 101 SQPLSMNTSASTVTQQVGRHCDQQMMDGWSYPHS 134


>AJ439353-6|CAD27928.1|  695|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 695

 Score = 23.4 bits (48), Expect = 6.1
 Identities = 7/27 (25%), Positives = 15/27 (55%)
 Frame = -1

Query: 257 SWLGAVEVGTVHQSSRMNSQCIYLLAS 177
           SW  ++++G  H     N+ CI  +++
Sbjct: 669 SWESSIDLGAYHLHETKNADCISTISN 695


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 657,187
Number of Sequences: 2352
Number of extensions: 14461
Number of successful extensions: 20
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 62305095
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)