Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10940
         (635 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY051694-1|AAK93118.1|  498|Drosophila melanogaster LD23968p pro...   154   1e-37
AE014298-1133|AAF46332.1|  498|Drosophila melanogaster CG2263-PA...   154   1e-37
AY119261-1|AAM51121.1|  940|Drosophila melanogaster SD22791p pro...    31   1.7  
AL031583-4|CAA20898.1| 1045|Drosophila melanogaster EG:34F3.4 pr...    31   1.7  
AE014298-108|AAF45550.2|  940|Drosophila melanogaster CG16989-PA...    31   1.7  
AY052030-1|AAK93454.1| 1422|Drosophila melanogaster LD47893p pro...    29   4.0  
AF104401-1|AAF14115.1| 1827|Drosophila melanogaster SPT6 protein...    29   4.0  
AF104400-1|AAF14114.1| 1831|Drosophila melanogaster SPT6 protein...    29   4.0  
AE014298-861|AAF46140.1| 1831|Drosophila melanogaster CG12225-PA...    29   4.0  

>AY051694-1|AAK93118.1|  498|Drosophila melanogaster LD23968p
           protein.
          Length = 498

 Score =  154 bits (373), Expect = 1e-37
 Identities = 67/85 (78%), Positives = 75/85 (88%)
 Frame = +2

Query: 2   KLETDLTSDMLLSGSWKTLEFKPYNFDALGQPPECGHLHPLLKVRSEFREIFLEMGFTEM 181
           KLETDLT +ML +G W  L+FK YNFDALG PP  GHLHPLLKVR+EFR+IFLEMGF+EM
Sbjct: 186 KLETDLTVEMLANGLWDQLKFKAYNFDALGAPPTRGHLHPLLKVRTEFRQIFLEMGFSEM 245

Query: 182 PTNKYIESSFWNFDALFQPQQHPAR 256
           PTN Y+ESSFWNFDAL+QPQQHPAR
Sbjct: 246 PTNNYVESSFWNFDALYQPQQHPAR 270



 Score =  132 bits (319), Expect = 4e-31
 Identities = 58/86 (67%), Positives = 72/86 (83%)
 Frame = +1

Query: 247 PSQDAHDTFFMSSPAATTEFPMEYLERVKKVHSKGGYGSQGYRYDWKIEEAQKNLLRTHT 426
           P++DAHDTFF++ PA + +FP +YLERVKKVHS GGYGS+GY YDWK+EEAQKNLLRTHT
Sbjct: 268 PARDAHDTFFVNHPAKSHKFPQDYLERVKKVHSVGGYGSKGYGYDWKLEEAQKNLLRTHT 327

Query: 427 TAVSARMLYRLAHNQSSLRRSTLASI 504
           TAVSARMLY+LA+ +   + +   SI
Sbjct: 328 TAVSARMLYKLANQEGGFKAAKYFSI 353



 Score = 68.1 bits (159), Expect = 9e-12
 Identities = 32/42 (76%), Positives = 35/42 (83%)
 Frame = +2

Query: 509 FRNETLDATHLAEFHQVEGVVADRGLGLADLITVLDAFFKRL 634
           FRNETLDATHLAEFHQVEGV+AD GL L DLI  L  FF++L
Sbjct: 357 FRNETLDATHLAEFHQVEGVIADVGLTLGDLIGTLYEFFRKL 398


>AE014298-1133|AAF46332.1|  498|Drosophila melanogaster CG2263-PA
           protein.
          Length = 498

 Score =  154 bits (373), Expect = 1e-37
 Identities = 67/85 (78%), Positives = 75/85 (88%)
 Frame = +2

Query: 2   KLETDLTSDMLLSGSWKTLEFKPYNFDALGQPPECGHLHPLLKVRSEFREIFLEMGFTEM 181
           KLETDLT +ML +G W  L+FK YNFDALG PP  GHLHPLLKVR+EFR+IFLEMGF+EM
Sbjct: 186 KLETDLTVEMLANGLWDQLKFKAYNFDALGAPPTRGHLHPLLKVRTEFRQIFLEMGFSEM 245

Query: 182 PTNKYIESSFWNFDALFQPQQHPAR 256
           PTN Y+ESSFWNFDAL+QPQQHPAR
Sbjct: 246 PTNNYVESSFWNFDALYQPQQHPAR 270



 Score =  132 bits (319), Expect = 4e-31
 Identities = 58/86 (67%), Positives = 72/86 (83%)
 Frame = +1

Query: 247 PSQDAHDTFFMSSPAATTEFPMEYLERVKKVHSKGGYGSQGYRYDWKIEEAQKNLLRTHT 426
           P++DAHDTFF++ PA + +FP +YLERVKKVHS GGYGS+GY YDWK+EEAQKNLLRTHT
Sbjct: 268 PARDAHDTFFVNHPAKSHKFPQDYLERVKKVHSVGGYGSKGYGYDWKLEEAQKNLLRTHT 327

Query: 427 TAVSARMLYRLAHNQSSLRRSTLASI 504
           TAVSARMLY+LA+ +   + +   SI
Sbjct: 328 TAVSARMLYKLANQEGGFKAAKYFSI 353



 Score = 68.1 bits (159), Expect = 9e-12
 Identities = 32/42 (76%), Positives = 35/42 (83%)
 Frame = +2

Query: 509 FRNETLDATHLAEFHQVEGVVADRGLGLADLITVLDAFFKRL 634
           FRNETLDATHLAEFHQVEGV+AD GL L DLI  L  FF++L
Sbjct: 357 FRNETLDATHLAEFHQVEGVIADVGLTLGDLIGTLYEFFRKL 398


>AY119261-1|AAM51121.1|  940|Drosophila melanogaster SD22791p
           protein.
          Length = 940

 Score = 30.7 bits (66), Expect = 1.7
 Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 4/55 (7%)
 Frame = -1

Query: 224 HQSSRMNSQCIYLLASP*NPFPRIS-HGI-PTLLSRGDGGD--HILVVGLKHQNY 72
           HQ +++    ++LL++  N  PR S +G    L   GD G   H+L++GLK  N+
Sbjct: 226 HQEAKVRISALHLLSTLTNQLPRRSFYGYWHVLFPDGDAGGTPHLLLLGLKDTNF 280


>AL031583-4|CAA20898.1| 1045|Drosophila melanogaster EG:34F3.4
           protein.
          Length = 1045

 Score = 30.7 bits (66), Expect = 1.7
 Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 4/55 (7%)
 Frame = -1

Query: 224 HQSSRMNSQCIYLLASP*NPFPRIS-HGI-PTLLSRGDGGD--HILVVGLKHQNY 72
           HQ +++    ++LL++  N  PR S +G    L   GD G   H+L++GLK  N+
Sbjct: 331 HQEAKVRISALHLLSTLTNQLPRRSFYGYWHVLFPDGDAGGTPHLLLLGLKDTNF 385


>AE014298-108|AAF45550.2|  940|Drosophila melanogaster CG16989-PA
           protein.
          Length = 940

 Score = 30.7 bits (66), Expect = 1.7
 Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 4/55 (7%)
 Frame = -1

Query: 224 HQSSRMNSQCIYLLASP*NPFPRIS-HGI-PTLLSRGDGGD--HILVVGLKHQNY 72
           HQ +++    ++LL++  N  PR S +G    L   GD G   H+L++GLK  N+
Sbjct: 226 HQEAKVRISALHLLSTLTNQLPRRSFYGYWHVLFPDGDAGGTPHLLLLGLKDTNF 280


>AY052030-1|AAK93454.1| 1422|Drosophila melanogaster LD47893p protein.
          Length = 1422

 Score = 29.5 bits (63), Expect = 4.0
 Identities = 16/49 (32%), Positives = 25/49 (51%)
 Frame = +1

Query: 271  FFMSSPAATTEFPMEYLERVKKVHSKGGYGSQGYRYDWKIEEAQKNLLR 417
            FF +S A   +F + YL + K  H       +GYR+  +I +   +LLR
Sbjct: 1061 FFTASRAMPGKFLLSYLPKTKVRHEYVTVMPEGYRFRGQIFDTVNSLLR 1109


>AF104401-1|AAF14115.1| 1827|Drosophila melanogaster SPT6 protein
            protein.
          Length = 1827

 Score = 29.5 bits (63), Expect = 4.0
 Identities = 16/49 (32%), Positives = 25/49 (51%)
 Frame = +1

Query: 271  FFMSSPAATTEFPMEYLERVKKVHSKGGYGSQGYRYDWKIEEAQKNLLR 417
            FF +S A   +F + YL + K  H       +GYR+  +I +   +LLR
Sbjct: 1466 FFTASRAMPGKFLLSYLPKTKVRHEYVTVMPEGYRFRGQIFDTVNSLLR 1514


>AF104400-1|AAF14114.1| 1831|Drosophila melanogaster SPT6 protein
            protein.
          Length = 1831

 Score = 29.5 bits (63), Expect = 4.0
 Identities = 16/49 (32%), Positives = 25/49 (51%)
 Frame = +1

Query: 271  FFMSSPAATTEFPMEYLERVKKVHSKGGYGSQGYRYDWKIEEAQKNLLR 417
            FF +S A   +F + YL + K  H       +GYR+  +I +   +LLR
Sbjct: 1470 FFTASRAMPGKFLLSYLPKTKVRHEYVTVMPEGYRFRGQIFDTVNSLLR 1518


>AE014298-861|AAF46140.1| 1831|Drosophila melanogaster CG12225-PA
            protein.
          Length = 1831

 Score = 29.5 bits (63), Expect = 4.0
 Identities = 16/49 (32%), Positives = 25/49 (51%)
 Frame = +1

Query: 271  FFMSSPAATTEFPMEYLERVKKVHSKGGYGSQGYRYDWKIEEAQKNLLR 417
            FF +S A   +F + YL + K  H       +GYR+  +I +   +LLR
Sbjct: 1470 FFTASRAMPGKFLLSYLPKTKVRHEYVTVMPEGYRFRGQIFDTVNSLLR 1518


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,615,983
Number of Sequences: 53049
Number of extensions: 648000
Number of successful extensions: 1975
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1850
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1975
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2662347150
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)