Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10931
         (645 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81470-7|CAB03885.1|  129|Caenorhabditis elegans Hypothetical pr...    29   2.8  
Z70757-4|CAA94800.1| 1208|Caenorhabditis elegans Hypothetical pr...    27   8.6  
AF016448-5|AAB65955.2|  320|Caenorhabditis elegans Hypothetical ...    27   8.6  

>Z81470-7|CAB03885.1|  129|Caenorhabditis elegans Hypothetical
           protein C14A6.8 protein.
          Length = 129

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 13/22 (59%), Positives = 14/22 (63%)
 Frame = -1

Query: 492 DNNIKATSADGVVKPPEANERL 427
           DN  K TS DGV K PE+N  L
Sbjct: 55  DNGAKVTSGDGVQKLPESNPSL 76


>Z70757-4|CAA94800.1| 1208|Caenorhabditis elegans Hypothetical
           protein ZK287.4 protein.
          Length = 1208

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 16/54 (29%), Positives = 29/54 (53%)
 Frame = -2

Query: 254 PGNSSSSIIITEVKLPRFR*N*TFLL*STRAIIHSTPDAKCL*ESIKNNVTSAL 93
           PG  SSSI + +   P  + N + +L ST++  +++P       S+ N+ TS +
Sbjct: 497 PGYPSSSIYLPQPAYPEVKPNSSVILSSTQSQNNTSPQTIPASASVTNSATSTV 550


>AF016448-5|AAB65955.2|  320|Caenorhabditis elegans Hypothetical
           protein F41E6.5 protein.
          Length = 320

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = -1

Query: 384 FVSFNSRVHLKMPKGSWNISSFYQYV 307
           F +F S    +MPKG    S F QYV
Sbjct: 187 FANFESNTQAEMPKGHVGESGFMQYV 212


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,200,420
Number of Sequences: 27780
Number of extensions: 253541
Number of successful extensions: 393
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 387
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 393
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1423653030
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)