Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10931
         (645 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    24   1.1  
AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    23   3.3  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    23   3.3  
AF393496-1|AAL60421.1|  146|Apis mellifera odorant binding prote...    21   7.7  
AF339140-1|AAK01304.1|  120|Apis mellifera odorant binding prote...    21   7.7  

>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 11/31 (35%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
 Frame = -3

Query: 637 ATIYFLGNVVLFVFSIIN---FIDNQLYDSS 554
           A I+ LGN ++F+F +I     + N+LY+ +
Sbjct: 330 AGIHTLGNTLVFLFDLIGRNPTVQNKLYEET 360


>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -2

Query: 443 KPMNVWFKVRPRK 405
           +PMNVWF  R R+
Sbjct: 588 EPMNVWFLSRERE 600


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -2

Query: 443 KPMNVWFKVRPRK 405
           +PMNVWF  R R+
Sbjct: 588 EPMNVWFLSRERE 600


>AF393496-1|AAL60421.1|  146|Apis mellifera odorant binding protein
           ASP6 protein.
          Length = 146

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 8/30 (26%), Positives = 17/30 (56%)
 Frame = -3

Query: 412 QENELFIYIICVF*LTCSLKNA*RILEYFI 323
           Q+  L  Y+ C+   T ++KN   + ++F+
Sbjct: 64  QDERLMCYMKCIMIATKAMKNDVILWDFFV 93


>AF339140-1|AAK01304.1|  120|Apis mellifera odorant binding protein
           protein.
          Length = 120

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 8/30 (26%), Positives = 17/30 (56%)
 Frame = -3

Query: 412 QENELFIYIICVF*LTCSLKNA*RILEYFI 323
           Q+  L  Y+ C+   T ++KN   + ++F+
Sbjct: 38  QDERLMCYMKCIMIATKAMKNDVILWDFFV 67


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,107
Number of Sequences: 438
Number of extensions: 2993
Number of successful extensions: 10
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19438227
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)