Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10914X
         (333 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    23   1.3  
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    23   1.3  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    23   1.3  
DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1 pr...    22   2.2  
AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-ri...    22   2.2  
AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.    22   2.2  
DQ325109-1|ABD14123.1|  177|Apis mellifera complementary sex det...    20   6.8  
DQ325108-1|ABD14122.1|  177|Apis mellifera complementary sex det...    20   6.8  
DQ325107-1|ABD14121.1|  176|Apis mellifera complementary sex det...    20   6.8  
DQ325106-1|ABD14120.1|  177|Apis mellifera complementary sex det...    20   6.8  
AY350615-1|AAQ57657.1|  410|Apis mellifera complementary sex det...    20   6.8  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    20   9.1  

>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 22.6 bits (46), Expect = 1.3
 Identities = 9/35 (25%), Positives = 17/35 (48%)
 Frame = +2

Query: 83  RILKHQRAIRCRNEEDGGRNEQIQIRTHEQRKQQF 187
           RIL+ ++ + C+ E+ G     +    +   KQ F
Sbjct: 209 RILEAEKRVECKMEQQGNYENAVSHICNATNKQLF 243


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 22.6 bits (46), Expect = 1.3
 Identities = 9/35 (25%), Positives = 17/35 (48%)
 Frame = +2

Query: 83  RILKHQRAIRCRNEEDGGRNEQIQIRTHEQRKQQF 187
           RIL+ ++ + C+ E+ G     +    +   KQ F
Sbjct: 209 RILEAEKRVECKMEQQGNYENAVSHICNATNKQLF 243


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 22.6 bits (46), Expect = 1.3
 Identities = 13/47 (27%), Positives = 28/47 (59%)
 Frame = +3

Query: 9   TRKMADSGLKRNIPIKLGDLSVIDTEFSSIRERLDAEMRKMEEEMSK 149
           +R +  +G ++++ +KL     +D E    + +L+  MRK++EEM +
Sbjct: 349 SRDLMLAGTQQSVELKLA----LDQEQLKSK-KLEESMRKLDEEMKR 390


>DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1
           precursor protein.
          Length = 223

 Score = 21.8 bits (44), Expect = 2.2
 Identities = 9/40 (22%), Positives = 22/40 (55%)
 Frame = +3

Query: 75  IDTEFSSIRERLDAEMRKMEEEMSKFRSELMNRESNNFFK 194
           +D  + +++  + A M+K+ E+M+   S +  +   N+ K
Sbjct: 81  LDGWYQTLQSAISAHMKKVREQMAGILSRIPEQGVVNWNK 120


>AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-rich
           protein precursor protein.
          Length = 223

 Score = 21.8 bits (44), Expect = 2.2
 Identities = 9/40 (22%), Positives = 22/40 (55%)
 Frame = +3

Query: 75  IDTEFSSIRERLDAEMRKMEEEMSKFRSELMNRESNNFFK 194
           +D  + +++  + A M+K+ E+M+   S +  +   N+ K
Sbjct: 81  LDGWYQTLQSAISAHMKKVREQMAGILSRIPEQGVVNWNK 120


>AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.
          Length = 223

 Score = 21.8 bits (44), Expect = 2.2
 Identities = 9/40 (22%), Positives = 22/40 (55%)
 Frame = +3

Query: 75  IDTEFSSIRERLDAEMRKMEEEMSKFRSELMNRESNNFFK 194
           +D  + +++  + A M+K+ E+M+   S +  +   N+ K
Sbjct: 81  LDGWYQTLQSAISAHMKKVREQMAGILSRIPEQGVVNWNK 120


>DQ325109-1|ABD14123.1|  177|Apis mellifera complementary sex
           determiner protein.
          Length = 177

 Score = 20.2 bits (40), Expect = 6.8
 Identities = 9/39 (23%), Positives = 20/39 (51%)
 Frame = +3

Query: 78  DTEFSSIRERLDAEMRKMEEEMSKFRSELMNRESNNFFK 194
           +T     R+R + E  K  + +S   ++ ++  +NN+ K
Sbjct: 61  ETSKERSRDRKERERSKEPKIISSLSNKTIHNNNNNYKK 99


>DQ325108-1|ABD14122.1|  177|Apis mellifera complementary sex
           determiner protein.
          Length = 177

 Score = 20.2 bits (40), Expect = 6.8
 Identities = 9/39 (23%), Positives = 20/39 (51%)
 Frame = +3

Query: 78  DTEFSSIRERLDAEMRKMEEEMSKFRSELMNRESNNFFK 194
           +T     R+R + E  K  + +S   ++ ++  +NN+ K
Sbjct: 61  ETSKERSRDRKERERSKEPKIISSLSNKTIHNNNNNYKK 99


>DQ325107-1|ABD14121.1|  176|Apis mellifera complementary sex
           determiner protein.
          Length = 176

 Score = 20.2 bits (40), Expect = 6.8
 Identities = 9/39 (23%), Positives = 20/39 (51%)
 Frame = +3

Query: 78  DTEFSSIRERLDAEMRKMEEEMSKFRSELMNRESNNFFK 194
           +T     R+R + E  K  + +S   ++ ++  +NN+ K
Sbjct: 61  ETSKERSRDRKERERSKEPKIISSLSNKTIHNNNNNYKK 99


>DQ325106-1|ABD14120.1|  177|Apis mellifera complementary sex
           determiner protein.
          Length = 177

 Score = 20.2 bits (40), Expect = 6.8
 Identities = 9/39 (23%), Positives = 20/39 (51%)
 Frame = +3

Query: 78  DTEFSSIRERLDAEMRKMEEEMSKFRSELMNRESNNFFK 194
           +T     R+R + E  K  + +S   ++ ++  +NN+ K
Sbjct: 61  ETSKERSRDRKERERSKEPKIISSLSNKTIHNNNNNYKK 99


>AY350615-1|AAQ57657.1|  410|Apis mellifera complementary sex
           determiner protein.
          Length = 410

 Score = 20.2 bits (40), Expect = 6.8
 Identities = 9/39 (23%), Positives = 20/39 (51%)
 Frame = +3

Query: 78  DTEFSSIRERLDAEMRKMEEEMSKFRSELMNRESNNFFK 194
           +T     R+R + E  K  + +S   ++ ++  +NN+ K
Sbjct: 294 ETSKERSRDRKERERSKEPKIISSLSNKTIHNNNNNYKK 332


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 19.8 bits (39), Expect = 9.1
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -2

Query: 281 AASLSYPSDGLGKLSAVTML 222
           A+S+S   +GLG   A+T L
Sbjct: 599 ASSVSAGEEGLGNSLAITAL 618


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,242
Number of Sequences: 438
Number of extensions: 1130
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  7466580
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)