Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10914X
(333 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g68790.1 68414.m07863 expressed protein 31 0.25
At1g79940.1 68414.m09342 DNAJ heat shock N-terminal domain-conta... 29 0.77
At1g71410.1 68414.m08247 protein kinase family protein contains ... 29 1.0
At1g65010.1 68414.m07368 expressed protein similar to endosome-a... 28 1.4
At5g23750.2 68418.m02787 remorin family protein contains Pfam do... 27 2.4
At5g23750.1 68418.m02786 remorin family protein contains Pfam do... 27 2.4
At4g22970.1 68417.m03315 peptidase C50 family protein contains P... 27 2.4
At3g53310.1 68416.m05881 transcriptional factor B3 family protei... 27 3.1
At3g30480.1 68416.m03857 hypothetical protein 27 3.1
At3g58840.1 68416.m06558 expressed protein 27 4.1
At1g36380.1 68414.m04519 expressed protein similar to vanilloid ... 26 5.5
At5g37010.1 68418.m04438 expressed protein 25 9.5
At2g26270.1 68415.m03153 expressed protein ; expression supporte... 25 9.5
At1g80790.1 68414.m09479 XH/XS domain-containing protein / XS zi... 25 9.5
>At1g68790.1 68414.m07863 expressed protein
Length = 1085
Score = 30.7 bits (66), Expect = 0.25
Identities = 14/47 (29%), Positives = 30/47 (63%)
Frame = +3
Query: 36 KRNIPIKLGDLSVIDTEFSSIRERLDAEMRKMEEEMSKFRSELMNRE 176
+ +I IKL D+S+ + +F +++ ++D + E+E+ +F L+ RE
Sbjct: 303 EESIKIKLNDISLKEKDFEAMKAKVDIK----EKELHEFEENLIERE 345
>At1g79940.1 68414.m09342 DNAJ heat shock N-terminal
domain-containing protein / sec63 domain-containing
protein similar to SP|Q9UGP8 Translocation protein SEC63
homolog {Homo sapiens}; contains Pfam profiles PF00226
DnaJ domain, PF02889 Sec63 domain
Length = 702
Score = 29.1 bits (62), Expect = 0.77
Identities = 11/36 (30%), Positives = 22/36 (61%)
Frame = +3
Query: 45 IPIKLGDLSVIDTEFSSIRERLDAEMRKMEEEMSKF 152
IP++ D + F S+R L+ +++ M++E +KF
Sbjct: 258 IPVRRTDDEPLQKLFMSVRSELNLDLKNMKQEQAKF 293
>At1g71410.1 68414.m08247 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 909
Score = 28.7 bits (61), Expect = 1.0
Identities = 15/52 (28%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +3
Query: 42 NIPIKLGDLSVIDTE-FSSIRERLDAEMRKMEEEMSKFRSELMNRESNNFFK 194
N+ + + L+ I E FSSI L +++++M FR ++ +NFF+
Sbjct: 293 NVKMYMNTLNYITNESFSSIPSELVSDLQRMLSTNESFRPTALDFTGSNFFR 344
>At1g65010.1 68414.m07368 expressed protein similar to
endosome-associated protein (GI:1016368) [Homo sapiens];
similar to Centromeric protein E (CENP-E protein)
(Swiss-Prot:Q02224) [Homo sapiens]
Length = 1318
Score = 28.3 bits (60), Expect = 1.4
Identities = 13/38 (34%), Positives = 26/38 (68%)
Frame = +3
Query: 66 LSVIDTEFSSIRERLDAEMRKMEEEMSKFRSELMNRES 179
L + + E ++ER A ++K+EE +SK + +L+N+E+
Sbjct: 902 LQISNHEKEELKERETAYLKKIEE-LSKVQEDLLNKEN 938
>At5g23750.2 68418.m02787 remorin family protein contains Pfam
domain, PF03766: Remorin, N-terminal region; contains
Pfam domain, PF03763: Remorin, C-terminal region
Length = 201
Score = 27.5 bits (58), Expect = 2.4
Identities = 12/39 (30%), Positives = 26/39 (66%)
Frame = +3
Query: 66 LSVIDTEFSSIRERLDAEMRKMEEEMSKFRSELMNRESN 182
LS I + ++ + ++AE++KMEE++ K ++E + + N
Sbjct: 115 LSSIGSWENNKKAAVEAELKKMEEQLEKKKAEYVEQMKN 153
>At5g23750.1 68418.m02786 remorin family protein contains Pfam
domain, PF03766: Remorin, N-terminal region; contains
Pfam domain, PF03763: Remorin, C-terminal region
Length = 202
Score = 27.5 bits (58), Expect = 2.4
Identities = 12/39 (30%), Positives = 26/39 (66%)
Frame = +3
Query: 66 LSVIDTEFSSIRERLDAEMRKMEEEMSKFRSELMNRESN 182
LS I + ++ + ++AE++KMEE++ K ++E + + N
Sbjct: 116 LSSIGSWENNKKAAVEAELKKMEEQLEKKKAEYVEQMKN 154
>At4g22970.1 68417.m03315 peptidase C50 family protein contains Pfam
PF03568: Peptidase family C50
Length = 1773
Score = 27.5 bits (58), Expect = 2.4
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +1
Query: 19 WLTVVSREISPSSLAIYRLSIQNSQASESD*MPK*GRWRKK 141
W T V E++P+ +I S +S +E D + G W KK
Sbjct: 1359 WGTTVVDEVAPAFKSILEESHSSSSTTEEDTIESRGLWWKK 1399
>At3g53310.1 68416.m05881 transcriptional factor B3 family protein
contains Pfam profile PF02362: B3 DNA binding domain
Length = 286
Score = 27.1 bits (57), Expect = 3.1
Identities = 14/51 (27%), Positives = 23/51 (45%)
Frame = +2
Query: 26 QWSQEKYPHQAWRFIGYRYRILKHQRAIRCRNEEDGGRNEQIQIRTHEQRK 178
+W+ ++ + W I R R+ KHQ + C D + IR H R+
Sbjct: 235 KWADKRVCFKGWDRICRRNRLKKHQDTVECELLHDDQKMVH-SIRVHVLRR 284
>At3g30480.1 68416.m03857 hypothetical protein
Length = 156
Score = 27.1 bits (57), Expect = 3.1
Identities = 10/40 (25%), Positives = 23/40 (57%)
Frame = +3
Query: 66 LSVIDTEFSSIRERLDAEMRKMEEEMSKFRSELMNRESNN 185
LSV+D+E S+ + + E+ ++ + + + ++M E N
Sbjct: 77 LSVMDSELSAAKSEVAVELEALQAMVKELKEKVMRSEREN 116
>At3g58840.1 68416.m06558 expressed protein
Length = 318
Score = 26.6 bits (56), Expect = 4.1
Identities = 14/42 (33%), Positives = 25/42 (59%)
Frame = +3
Query: 39 RNIPIKLGDLSVIDTEFSSIRERLDAEMRKMEEEMSKFRSEL 164
R++ K+G L V + E S + R + EMR++++E + EL
Sbjct: 159 RDLERKIGVLEVREMEEKSKKLRSEEEMREIDDEKKREIEEL 200
>At1g36380.1 68414.m04519 expressed protein similar to vanilloid
receptor-like protein GB:AAD26363 from [Homo sapiens]
Length = 84
Score = 26.2 bits (55), Expect = 5.5
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = -3
Query: 94 LENSVSITDKSPSLMGIFLLRPLSAIFLVIC 2
+E+S S D +L FL+RPL AI VIC
Sbjct: 1 MESSPSFLD---NLFFFFLIRPLLAISFVIC 28
>At5g37010.1 68418.m04438 expressed protein
Length = 637
Score = 25.4 bits (53), Expect = 9.5
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = +2
Query: 125 EDGGRNEQIQIRTHEQRKQ 181
EDGG +E+ + R H QR++
Sbjct: 154 EDGGEDEEAERRIHRQRQR 172
>At2g26270.1 68415.m03153 expressed protein ; expression supported
by MPSS
Length = 470
Score = 25.4 bits (53), Expect = 9.5
Identities = 19/67 (28%), Positives = 29/67 (43%), Gaps = 2/67 (2%)
Frame = +2
Query: 89 LKHQRAIRCRNEEDGGRNEQI--QIRTHEQRKQQFLQEHN*HDDIFTA**QQTACRARHW 262
L Q + N EDG NE+I Q + E K + L + + + A RARH
Sbjct: 215 LARQLGLMLENFEDGAANEKISGQGNSQEAFKSRSLSKQERKETVNIAKTGVRRRRARHM 274
Query: 263 DSLNSPL 283
+ +P+
Sbjct: 275 QTCQNPI 281
>At1g80790.1 68414.m09479 XH/XS domain-containing protein / XS zinc
finger domain-containing protein contains Pfam domains
PF03469: XH domain, PF03468: XS domain and PF03470: XS
zinc finger domain
Length = 634
Score = 25.4 bits (53), Expect = 9.5
Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Frame = +3
Query: 15 KMADSGLKRNIPIK--LGDLSVIDTEFSSIRERLDAEMRKMEEEMSKFRSELMNRESNN 185
K DS K + I+ G L V+ E E + +M+KM+EE+ + SEL + E N
Sbjct: 406 KELDSKQKLQMEIQELKGKLKVMKHEDED-DEGIKKKMKKMKEELEEKCSELQDLEDTN 463
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,619,652
Number of Sequences: 28952
Number of extensions: 89347
Number of successful extensions: 344
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 336
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 344
length of database: 12,070,560
effective HSP length: 71
effective length of database: 10,014,968
effective search space used: 390583752
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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