Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10912
         (735 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           23   2.6  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    23   3.4  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    22   4.5  
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           22   4.5  
AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    22   5.9  
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    21   7.8  

>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 10/37 (27%), Positives = 18/37 (48%)
 Frame = -2

Query: 119 WSRGLSNFTRTGVRAQSGGKEFANSCSSTSGGDLPQG 9
           W +   N  R    +++ G+   NS +S +GG +  G
Sbjct: 388 WRKNNPNDNRNNTSSRAQGETSRNSKNSGNGGGVQDG 424


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
 Frame = -2

Query: 152 DSIGIGMKDYCWSRGLSNFTRTGVR--AQSGGKE 57
           + + IGM  Y  +  LSN  + GV   A  GGKE
Sbjct: 325 EKLVIGMPTYGRTFTLSNTAKFGVHAPASGGGKE 358


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = -1

Query: 246 SKSDTKYINIFKRKN*KLRK 187
           S S TK+ N+ KRK+  ++K
Sbjct: 71  SPSKTKFFNLIKRKDSPVQK 90


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -3

Query: 70  QEERNLPTAAQAPPEETYLKGSC 2
           Q +R  PT  Q+P  +T+   SC
Sbjct: 77  QPQRLAPTHLQSPNTQTHPSASC 99


>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 9/28 (32%), Positives = 17/28 (60%)
 Frame = -3

Query: 250 TLEKRYQIHKYIQKKKLKTSEIFGFILL 167
           T++K + +HK + K   + + IF F +L
Sbjct: 132 TIKKLFNLHKILVKVVREINGIFAFQVL 159


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = -2

Query: 545 LHVTFHTVTNR*RLTYRIQRIAILNASI 462
           LHV F T+ N+    Y +  + + NAS+
Sbjct: 118 LHVFFFTLFNKLLGQYPVGIVGVKNASL 145


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 177,254
Number of Sequences: 336
Number of extensions: 3987
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19675845
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)