Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10904
         (820 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    29   0.044
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    29   0.044
AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.           24   1.7  
AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax pr...    22   6.7  
AF260820-1|AAG02018.1|  139|Tribolium castaneum alpha-esterase l...    22   6.7  

>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 29.1 bits (62), Expect = 0.044
 Identities = 13/42 (30%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
 Frame = -3

Query: 389 LGIEF-RWDRSEFDRYYVLIYYSFGFYYIVDVIFVVHLNSTR 267
           +G+EF +    E+ + YVL + +F F+ +V ++ V + N T+
Sbjct: 140 MGLEFYKQFAIEYFQMYVLFFVNFAFFVVVKMLLVRYRNLTK 181


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 29.1 bits (62), Expect = 0.044
 Identities = 13/42 (30%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
 Frame = -3

Query: 389 LGIEF-RWDRSEFDRYYVLIYYSFGFYYIVDVIFVVHLNSTR 267
           +G+EF +    E+ + YVL + +F F+ +V ++ V + N T+
Sbjct: 140 MGLEFYKQFAIEYFQMYVLFFVNFAFFVVVKMLLVRYRNLTK 181


>AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.
          Length = 257

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 16/58 (27%), Positives = 28/58 (48%)
 Frame = +2

Query: 497 KTIRANALRTQSAQDLITLEPTEVESSTLAKFVRSVSQQKQISCSDSDPTGQEINSIP 670
           +T+R      +S +DL+ L+ + V SST +  + S S    +S + + P       IP
Sbjct: 102 ETLRMAVEYIRSLEDLLALDESTVSSSTSS--IPSPSTTDDLSTNPTPPPHYTYQIIP 157


>AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax
           protein.
          Length = 314

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -1

Query: 391 IWESNSGGTGVNLT 350
           +W+S + G G NLT
Sbjct: 119 VWQSATSGGGANLT 132


>AF260820-1|AAG02018.1|  139|Tribolium castaneum alpha-esterase like
           protein E1 protein.
          Length = 139

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 8/16 (50%), Positives = 8/16 (50%)
 Frame = -3

Query: 194 VLRMSENSPPSKWRGV 147
           VLR     PP  W GV
Sbjct: 13  VLRFKAPQPPENWTGV 28


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 183,449
Number of Sequences: 336
Number of extensions: 4286
Number of successful extensions: 15
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22414104
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)