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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10904
         (820 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce...    31   0.20 
SPCC74.01 |sly1||SNARE binding protein Sly1|Schizosaccharomyces ...    27   2.4  
SPAC27F1.10 |||sequence orphan|Schizosaccharomyces pombe|chr 1||...    27   3.2  
SPAC890.03 |ppk16|mug92|serine/threonine protein kinase Ppk16 |S...    27   4.2  
SPAC25G10.04c |rec10|rec20|meiotic recombination protein Rec10 |...    26   5.6  
SPBC25D12.03c |mcm7||MCM complex subunit Mcm7|Schizosaccharomyce...    26   5.6  
SPBC21D10.06c |map4||cell agglutination protein Map4|Schizosacch...    26   7.4  
SPBP23A10.13 |orc4|orp4|origin recognition complex subunit Orc4|...    25   9.8  
SPAC105.03c |||transcription factor |Schizosaccharomyces pombe|c...    25   9.8  
SPCC1902.02 |mug72|SPCC663.16c|ketopantoate reductase |Schizosac...    25   9.8  
SPAC20H4.07 |rhp57||RecA family ATPase Rhp57|Schizosaccharomyces...    25   9.8  

>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
            pombe|chr 1|||Manual
          Length = 1036

 Score = 31.1 bits (67), Expect = 0.20
 Identities = 23/77 (29%), Positives = 35/77 (45%)
 Frame = +2

Query: 500  TIRANALRTQSAQDLITLEPTEVESSTLAKFVRSVSQQKQISCSDSDPTGQEINSIPIKT 679
            TI  N   T +  DL T++PT   S+ L+   ++VS     S SD D      +S    T
Sbjct: 943  TITGNV--TITTGDLTTIDPTTFTSTYLSSGFQTVSNTTATSGSDDDVKTASTSSSTSYT 1000

Query: 680  ESDSLTSLVEKSIKTRA 730
             S S +S    +  ++A
Sbjct: 1001 SSSSSSSSTTSAASSKA 1017


>SPCC74.01 |sly1||SNARE binding protein Sly1|Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 639

 Score = 27.5 bits (58), Expect = 2.4
 Identities = 19/74 (25%), Positives = 34/74 (45%)
 Frame = +3

Query: 240 FHTP*VIDSPSTVEVHDKNYVDDIIKSETIINQDIITVKFTPVPPEFDSQMISPQLAKRS 419
           FHT     +PS+ E    + V DI+     +   + T+     P    ++M++ +L +R 
Sbjct: 172 FHT---FHNPSSDEALINSRVQDIVNGLFSVIVTLGTIPIIRCPQGSAAEMVAQKLNQRL 228

Query: 420 KTPIQYLKDDFVDL 461
           K  +   KD FV +
Sbjct: 229 KDHLMNTKDAFVSV 242


>SPAC27F1.10 |||sequence orphan|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 101

 Score = 27.1 bits (57), Expect = 3.2
 Identities = 11/28 (39%), Positives = 20/28 (71%), Gaps = 1/28 (3%)
 Frame = -3

Query: 353 DRYYVLIYYS-FGFYYIVDVIFVVHLNS 273
           ++Y + ++ S F F YIV+  F++HLN+
Sbjct: 69  EKYNISLFDSTFVFGYIVNCFFIIHLNT 96


>SPAC890.03 |ppk16|mug92|serine/threonine protein kinase Ppk16
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 672

 Score = 26.6 bits (56), Expect = 4.2
 Identities = 12/26 (46%), Positives = 18/26 (69%), Gaps = 1/26 (3%)
 Frame = +3

Query: 366 VPPE-FDSQMISPQLAKRSKTPIQYL 440
           +PP    + +ISPQ  +RS+TPI+ L
Sbjct: 526 IPPSPLQNTVISPQPTRRSRTPIRSL 551


>SPAC25G10.04c |rec10|rec20|meiotic recombination protein Rec10
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 791

 Score = 26.2 bits (55), Expect = 5.6
 Identities = 15/55 (27%), Positives = 26/55 (47%), Gaps = 3/55 (5%)
 Frame = +3

Query: 291 KNYVDDIIKSET---IINQDIITVKFTPVPPEFDSQMISPQLAKRSKTPIQYLKD 446
           K  ++D+ + +    I ++D   +K     PEF  + +  Q     KTP+Q  KD
Sbjct: 435 KTQIEDLEEDQNKSKIASKDGTNLKEINSVPEFSDENVINQTGPAKKTPVQRRKD 489


>SPBC25D12.03c |mcm7||MCM complex subunit Mcm7|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 760

 Score = 26.2 bits (55), Expect = 5.6
 Identities = 12/37 (32%), Positives = 20/37 (54%)
 Frame = +3

Query: 267 PSTVEVHDKNYVDDIIKSETIINQDIITVKFTPVPPE 377
           P TVE++ +N V D+I  + +   + I  +    PPE
Sbjct: 113 PPTVEINYRNEVLDVIMQQRVQRNENIDPEHKGFPPE 149


>SPBC21D10.06c |map4||cell agglutination protein
           Map4|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 948

 Score = 25.8 bits (54), Expect = 7.4
 Identities = 15/41 (36%), Positives = 21/41 (51%)
 Frame = +3

Query: 240 FHTP*VIDSPSTVEVHDKNYVDDIIKSETIINQDIITVKFT 362
           +HTP  I SP+T    D  Y  D+I S ++ +  I  V  T
Sbjct: 186 YHTP--IASPTTSSNSDNEYTVDVITSSSLSSFVITNVDST 224


>SPBP23A10.13 |orc4|orp4|origin recognition complex subunit
           Orc4|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 972

 Score = 25.4 bits (53), Expect = 9.8
 Identities = 13/28 (46%), Positives = 15/28 (53%)
 Frame = +2

Query: 47  DTVYSTTTFRPVSPLPITPPGSARRRHR 130
           D   STTT  P SP P+    + RRR R
Sbjct: 78  DNNISTTTLAPPSPSPLRLNEAPRRRGR 105


>SPAC105.03c |||transcription factor |Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 708

 Score = 25.4 bits (53), Expect = 9.8
 Identities = 13/49 (26%), Positives = 24/49 (48%)
 Frame = +2

Query: 554 EPTEVESSTLAKFVRSVSQQKQISCSDSDPTGQEINSIPIKTESDSLTS 700
           E  ++   +  +F++  S  K    S++ P    +NS  +  E+DSL S
Sbjct: 159 EHAKLSDLSYEEFLKKYSSTKVERVSEAAPPPSSLNSSTVLDENDSLIS 207


>SPCC1902.02 |mug72|SPCC663.16c|ketopantoate reductase
           |Schizosaccharomyces pombe|chr 3|||Manual
          Length = 574

 Score = 25.4 bits (53), Expect = 9.8
 Identities = 11/41 (26%), Positives = 20/41 (48%)
 Frame = +2

Query: 14  VKSPIKIIYNSDTVYSTTTFRPVSPLPITPPGSARRRHREL 136
           ++ P+  +Y++   Y T   +P +P    PP  A   HR +
Sbjct: 534 LEDPMSTLYDTSR-YPTRNSKPATPKASRPPSIASTVHRRM 573


>SPAC20H4.07 |rhp57||RecA family ATPase Rhp57|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 354

 Score = 25.4 bits (53), Expect = 9.8
 Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 7/74 (9%)
 Frame = +2

Query: 482 FFM*RKTIRANALRTQSAQDLITLEPTEVE------SSTLAKFVRSVSQQKQ-ISCSDSD 640
           F+   K   A  L   S  DL+TL+ TE+E       S L + +  +S   Q + CS S 
Sbjct: 10  FYFDEKIASAFELGEVSTVDLLTLDITELERRTHCSQSELLQLIEQISLLLQPVRCSASK 69

Query: 641 PTGQEINSIPIKTE 682
            T + + +  +K +
Sbjct: 70  VTSKYLTTGDVKLD 83


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,261,303
Number of Sequences: 5004
Number of extensions: 66765
Number of successful extensions: 226
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 216
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 226
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 400438000
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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