Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10904
         (820 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY146744-1|AAO12104.1|  176|Anopheles gambiae odorant-binding pr...    26   1.6  
AY341186-1|AAR13750.1|  189|Anopheles gambiae GNBP A1 protein.         25   2.8  
AY341185-1|AAR13749.1|  189|Anopheles gambiae GNBP A1 protein.         25   2.8  
AY341183-1|AAR13747.1|  189|Anopheles gambiae GNBP A1 protein.         25   2.8  
AY341187-1|AAR13751.1|  189|Anopheles gambiae GNBP A1 protein.         25   3.7  
AJ439353-4|CAD27926.1|  338|Anopheles gambiae putative hox prote...    24   4.9  

>AY146744-1|AAO12104.1|  176|Anopheles gambiae odorant-binding
           protein AgamOBP8 protein.
          Length = 176

 Score = 25.8 bits (54), Expect = 1.6
 Identities = 12/33 (36%), Positives = 17/33 (51%)
 Frame = -3

Query: 308 IVDVIFVVHLNSTRGVDDSWCVERCTLSTVTLL 210
           ++D +  V L+ T   D  WC+ RC L    LL
Sbjct: 79  LIDYMRQVALH-TDNADSRWCIVRCILQKADLL 110


>AY341186-1|AAR13750.1|  189|Anopheles gambiae GNBP A1 protein.
          Length = 189

 Score = 25.0 bits (52), Expect = 2.8
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = +2

Query: 2   KHTPVKSPIKIIYNSDTVYSTTTFRPVSPLPITPP 106
           KHT  ++   +   S T  +TTT +P +  P  PP
Sbjct: 111 KHTVTRTKATVAPKSTTTTTTTTVKPTTTTP--PP 143


>AY341185-1|AAR13749.1|  189|Anopheles gambiae GNBP A1 protein.
          Length = 189

 Score = 25.0 bits (52), Expect = 2.8
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = +2

Query: 2   KHTPVKSPIKIIYNSDTVYSTTTFRPVSPLPITPP 106
           KHT  ++   +   S T  +TTT +P +  P  PP
Sbjct: 111 KHTVTRTKATVAPKSTTTTTTTTVKPTTTTP--PP 143


>AY341183-1|AAR13747.1|  189|Anopheles gambiae GNBP A1 protein.
          Length = 189

 Score = 25.0 bits (52), Expect = 2.8
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = +2

Query: 2   KHTPVKSPIKIIYNSDTVYSTTTFRPVSPLPITPP 106
           KHT  ++   +   S T  +TTT +P +  P  PP
Sbjct: 111 KHTVTRTKATVAPKSTTTTTTTTVKPTTTTP--PP 143


>AY341187-1|AAR13751.1|  189|Anopheles gambiae GNBP A1 protein.
          Length = 189

 Score = 24.6 bits (51), Expect = 3.7
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = +2

Query: 2   KHTPVKSPIKIIYNSDTVYSTTTFRPVSPLPITPP 106
           KHT  ++   +   S T  +TTT +P +  P  PP
Sbjct: 111 KHTITRTKATVAPKSTTTTTTTTVKPTTTTP--PP 143


>AJ439353-4|CAD27926.1|  338|Anopheles gambiae putative hox protein
           protein.
          Length = 338

 Score = 24.2 bits (50), Expect = 4.9
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = +2

Query: 77  PVSPLPITPPGSA 115
           P + LP+TPPG+A
Sbjct: 27  PFTQLPVTPPGAA 39


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 812,155
Number of Sequences: 2352
Number of extensions: 17747
Number of successful extensions: 51
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 51
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 86902827
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)