Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10904
(820 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024794-7|AAK68501.3| 279|Caenorhabditis elegans Hypothetical ... 36 0.046
Z81512-3|CAE46668.1| 3175|Caenorhabditis elegans Hypothetical pr... 33 0.19
Z81512-2|CAB04172.2| 3184|Caenorhabditis elegans Hypothetical pr... 33 0.19
U23511-2|AAC46792.1| 369|Caenorhabditis elegans Hypothetical pr... 31 0.75
AC006656-3|AAF39882.1| 549|Caenorhabditis elegans Hypothetical ... 30 1.7
AC006605-2|AAL00853.1| 139|Caenorhabditis elegans Hypothetical ... 30 2.3
Z77666-3|CAB01225.1| 698|Caenorhabditis elegans Hypothetical pr... 29 4.0
AL110478-4|CAB54346.1| 546|Caenorhabditis elegans Hypothetical ... 29 4.0
Z78539-7|CAB01726.2| 560|Caenorhabditis elegans Hypothetical pr... 29 5.3
Z81594-2|CAB04746.1| 416|Caenorhabditis elegans Hypothetical pr... 28 9.2
AC006757-2|AAF60543.1| 416|Caenorhabditis elegans Hypothetical ... 28 9.2
>AC024794-7|AAK68501.3| 279|Caenorhabditis elegans Hypothetical
protein Y48G1BM.9 protein.
Length = 279
Score = 35.5 bits (78), Expect = 0.046
Identities = 18/57 (31%), Positives = 33/57 (57%)
Frame = +2
Query: 563 EVESSTLAKFVRSVSQQKQISCSDSDPTGQEINSIPIKTESDSLTSLVEKSIKTRAV 733
E E STL+ V + S++ + S+ T ++I+++P+ ++ S L KSI+T V
Sbjct: 11 ETEPSTLSTDVTTSSEETTSTSSEESTTFEDISTVPVALQNSSKVFLPAKSIRTPIV 67
>Z81512-3|CAE46668.1| 3175|Caenorhabditis elegans Hypothetical
protein F25C8.3b protein.
Length = 3175
Score = 33.5 bits (73), Expect = 0.19
Identities = 15/41 (36%), Positives = 25/41 (60%)
Frame = +2
Query: 662 SIPIKTESDSLTSLVEKSIKTRAVSENRELDHFLIRTCQKS 784
++P+ TE+ +L + KS T+ +ENR DH + + QKS
Sbjct: 475 AMPVTTETTTLPVTLPKSALTKTTNENRRTDHQRMPSTQKS 515
>Z81512-2|CAB04172.2| 3184|Caenorhabditis elegans Hypothetical
protein F25C8.3a protein.
Length = 3184
Score = 33.5 bits (73), Expect = 0.19
Identities = 15/41 (36%), Positives = 25/41 (60%)
Frame = +2
Query: 662 SIPIKTESDSLTSLVEKSIKTRAVSENRELDHFLIRTCQKS 784
++P+ TE+ +L + KS T+ +ENR DH + + QKS
Sbjct: 475 AMPVTTETTTLPVTLPKSALTKTTNENRRTDHQRMPSTQKS 515
>U23511-2|AAC46792.1| 369|Caenorhabditis elegans Hypothetical
protein C32D5.4 protein.
Length = 369
Score = 31.5 bits (68), Expect = 0.75
Identities = 18/60 (30%), Positives = 30/60 (50%)
Frame = -3
Query: 308 IVDVIFVVHLNSTRGVDDSWCVERCTLSTVTLLSNFPSVLRMSENSPPSKWRGVSNFLVL 129
I DV F + +N+T+G C E + T TL + LR S+ W+ ++ FL++
Sbjct: 29 IHDVYFFLTINNTQGN----CFETNIIFTATLFHSVTFQLRTSKRKNIDDWKKINQFLII 84
>AC006656-3|AAF39882.1| 549|Caenorhabditis elegans Hypothetical
protein H12I13.3 protein.
Length = 549
Score = 30.3 bits (65), Expect = 1.7
Identities = 16/45 (35%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
Frame = +2
Query: 641 PTGQEINSIPIKTESDSLTSLVEKSI--KTRAVSENRELDHFLIR 769
P +++N++ I S+ S++ I K+ +VSENR +D FLI+
Sbjct: 190 PKVEKLNNLAINVFSNDTNSIIPVHISKKSTSVSENRIIDLFLIK 234
>AC006605-2|AAL00853.1| 139|Caenorhabditis elegans Hypothetical
protein C07H6.9 protein.
Length = 139
Score = 29.9 bits (64), Expect = 2.3
Identities = 15/67 (22%), Positives = 34/67 (50%)
Frame = -3
Query: 401 RTYHLGIEFRWDRSEFDRYYVLIYYSFGFYYIVDVIFVVHLNSTRGVDDSWCVERCTLST 222
++ +LG + + ++E Y L+Y F +++ ++ V++ S GV L+
Sbjct: 12 QSVYLGSAYFYMKTESFVYLSLVYIQFSLFFLTSILIVIYFISYNGVQ--------RLNV 63
Query: 221 VTLLSNF 201
+T+ +NF
Sbjct: 64 ITITTNF 70
>Z77666-3|CAB01225.1| 698|Caenorhabditis elegans Hypothetical
protein K08E7.3 protein.
Length = 698
Score = 29.1 bits (62), Expect = 4.0
Identities = 17/58 (29%), Positives = 26/58 (44%)
Frame = -3
Query: 320 GFYYIVDVIFVVHLNSTRGVDDSWCVERCTLSTVTLLSNFPSVLRMSENSPPSKWRGV 147
G Y V+ IF+ +N ++ + C+L V LL S M +N P +W V
Sbjct: 423 GLEYNVNRIFITLVNRLEDLNAPLQFDECSL-IVNLLCKIDSFAAMLDNGPARRWSKV 479
>AL110478-4|CAB54346.1| 546|Caenorhabditis elegans Hypothetical
protein Y26D4A.10 protein.
Length = 546
Score = 29.1 bits (62), Expect = 4.0
Identities = 26/101 (25%), Positives = 41/101 (40%), Gaps = 1/101 (0%)
Frame = -3
Query: 473 FVTLQINKVILEILNWCFGPFGQLRTYHLGIEFRWDRSEFDRYYVLIYYSFGFYYIVDVI 294
+V L + E L + F F ++ Y+ EFR E + Y+ + +YY ++
Sbjct: 302 YVELNSERYPHECLKFDFDKFNAVQQYNFAKEFRNSYYESTKDYIFMEEDVYYYYYPLLV 361
Query: 293 FVVHLNSTRGVDDSWCVE-RCTLSTVTLLSNFPSVLRMSEN 174
F V + R + V + T S S L MSEN
Sbjct: 362 FDVSKQNDRIIQSRPDVTIKATFSKSIASSTKCYCLVMSEN 402
>Z78539-7|CAB01726.2| 560|Caenorhabditis elegans Hypothetical
protein C31E10.5 protein.
Length = 560
Score = 28.7 bits (61), Expect = 5.3
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +3
Query: 276 VEVHDKNYVDDIIKSETIINQDIITVKFTPVPPEFDSQMISPQ 404
VE +D VDDII I++ + + P+P E+ + +S Q
Sbjct: 414 VEFNDDKIVDDIIALSNRISKVVQVIMSIPLPDEYRKEAMSYQ 456
>Z81594-2|CAB04746.1| 416|Caenorhabditis elegans Hypothetical
protein T20F10.4 protein.
Length = 416
Score = 27.9 bits (59), Expect = 9.2
Identities = 17/69 (24%), Positives = 30/69 (43%)
Frame = -3
Query: 473 FVTLQINKVILEILNWCFGPFGQLRTYHLGIEFRWDRSEFDRYYVLIYYSFGFYYIVDVI 294
+V L + E L + F F ++ Y+ EFR E + Y+ + +YY ++
Sbjct: 302 YVELNSERYPHECLKFDFDKFNAVQQYNFAKEFRNSYYESTKDYIFMEEDVYYYYYPLLV 361
Query: 293 FVVHLNSTR 267
F V + R
Sbjct: 362 FDVSKQNDR 370
>AC006757-2|AAF60543.1| 416|Caenorhabditis elegans Hypothetical
protein Y40C7B.3 protein.
Length = 416
Score = 27.9 bits (59), Expect = 9.2
Identities = 17/69 (24%), Positives = 30/69 (43%)
Frame = -3
Query: 473 FVTLQINKVILEILNWCFGPFGQLRTYHLGIEFRWDRSEFDRYYVLIYYSFGFYYIVDVI 294
+V L + E L + F F ++ Y+ EFR E + Y+ + +YY ++
Sbjct: 302 YVELNSERYPHECLKFDFDKFNAVQQYNFAKEFRNSYYESTKDYIFMEEDVYYYYYPLLV 361
Query: 293 FVVHLNSTR 267
F V + R
Sbjct: 362 FDVSKQNDR 370
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,088,145
Number of Sequences: 27780
Number of extensions: 377095
Number of successful extensions: 1181
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1084
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1181
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2019417216
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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