Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10884
         (685 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    24   1.0  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    22   4.1  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    22   4.1  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    22   5.4  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    22   5.4  
AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    22   5.4  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 10/39 (25%), Positives = 19/39 (48%)
 Frame = +1

Query: 292  WTSPSSRLTWCLTPVSTSHWSRTRQSSLPRRPTMNSFPS 408
            W+S ++   W  T    +  +R   +S   RPT  ++P+
Sbjct: 1043 WSSTTTSPWWTTTTTRRTTTTRPTTTSTTTRPTTTNWPT 1081



 Score = 22.6 bits (46), Expect = 3.1
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +1

Query: 331  PVSTSHWSRTRQSSLPRRPT 390
            P +T+HW     +S   RPT
Sbjct: 1177 PSTTNHWQTKTTTSTTTRPT 1196



 Score = 21.8 bits (44), Expect = 5.4
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = +3

Query: 543  PSKPSVLSNSSTGVQPVSRSVSTTSHP 623
            P+KPS    S+T       + STT+ P
Sbjct: 1169 PTKPSYRPPSTTNHWQTKTTTSTTTRP 1195



 Score = 21.8 bits (44), Expect = 5.4
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = -1

Query: 190  YGGRCHRWLHC 158
            Y G C R+LHC
Sbjct: 1287 YPGDCTRYLHC 1297


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = -2

Query: 60  VDGELQFRLLAVVQRR 13
           V+G+L+FR L  V RR
Sbjct: 320 VEGQLEFRALLFVPRR 335


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = -1

Query: 280 PSNLKEAVMRRQSVR*DDSG 221
           P +  EAV+R +SVR +D G
Sbjct: 367 PIDHNEAVLRIESVRKEDKG 386


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = +1

Query: 163 EAIYDICRRNLDIERPTYTNLNRLIGQIV 249
           E I DIC R+ D       ++NR+ G I+
Sbjct: 510 EQIVDICIRSHDKLCDVCDSVNRIFGFII 538


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -3

Query: 446 LVGGLEACVCDLG 408
           L+GG  +C CDLG
Sbjct: 703 LMGGKWSCDCDLG 715


>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = -2

Query: 501 GTAYSKPCTCHDGGRISPSG 442
           G A++ P   HD G  SP G
Sbjct: 50  GNAHTGPTGTHDAGFPSPRG 69


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 177,601
Number of Sequences: 336
Number of extensions: 4200
Number of successful extensions: 23
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17906060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)