Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10884
(685 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 165 2e-41
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 165 2e-41
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 165 2e-41
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 165 2e-41
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 161 4e-40
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 161 4e-40
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 155 2e-38
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 84 1e-16
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 83 1e-16
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 83 2e-16
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 83 2e-16
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 83 2e-16
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 83 2e-16
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 83 2e-16
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 82 3e-16
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 82 3e-16
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 52 3e-07
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 52 4e-07
At1g70140.1 68414.m08071 formin homology 2 domain-containing pro... 34 0.10
At1g01190.1 68414.m00032 cytochrome P450, putative similar to cy... 31 0.71
At1g29200.1 68414.m03573 hypothetical protein contains Pfam PF03... 30 1.2
At3g57510.1 68416.m06402 endo-polygalacturonase (ADPG1) identica... 30 1.6
At1g61140.1 68414.m06888 SNF2 domain-containing protein / helica... 30 1.6
At2g07360.1 68415.m00843 SH3 domain-containing protein contains ... 29 3.8
At1g58250.1 68414.m06624 SABRE, putative similar to SABRE (GI:71... 29 3.8
At5g04230.1 68418.m00412 phenylalanine ammonia-lyase 3 (PAL3) ne... 28 5.0
At3g52500.1 68416.m05773 aspartyl protease family protein contai... 28 5.0
At2g15020.1 68415.m01710 expressed protein and genefinder 28 5.0
At1g62870.1 68414.m07099 expressed protein 28 5.0
At5g58890.1 68418.m07378 MADS-box family protein various predict... 28 6.6
At3g11690.1 68416.m01433 expressed protein 28 6.6
At5g63040.2 68418.m07909 expressed protein similar to unknown pr... 27 8.8
At5g63040.1 68418.m07908 expressed protein similar to unknown pr... 27 8.8
At5g25280.2 68418.m02999 serine-rich protein-related contains so... 27 8.8
At5g25280.1 68418.m02998 serine-rich protein-related contains so... 27 8.8
At5g12400.1 68418.m01458 PHD finger transcription factor, putati... 27 8.8
At3g01770.1 68416.m00116 DNA-binding bromodomain-containing prot... 27 8.8
At2g30670.1 68415.m03740 tropinone reductase, putative / tropine... 27 8.8
At1g21090.1 68414.m02638 hydroxyproline-rich glycoprotein family... 27 8.8
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 165 bits (401), Expect = 2e-41
Identities = 72/89 (80%), Positives = 82/89 (92%)
Frame = +3
Query: 255 ITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFE 434
+TASLRFDGALNVD+TEFQTNLVPYPRIHF L +YAPVISAEKA+HEQLSVAEITN+ FE
Sbjct: 238 LTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFE 297
Query: 435 PANQMVKCDPRHGKYMACCMLYRGESYPR 521
PA+ M KCDPRHGKYMACC++YRG+ P+
Sbjct: 298 PASMMAKCDPRHGKYMACCLMYRGDVVPK 326
Score = 130 bits (315), Expect = 6e-31
Identities = 54/77 (70%), Positives = 71/77 (92%)
Frame = +1
Query: 19 LNYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLD 198
++YGKKSKL F +YP+PQVST+VVEPYNS+L+TH+ LEH+D + ++DNEAIYDICRR+L+
Sbjct: 159 VDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLDNEAIYDICRRSLN 218
Query: 199 IERPTYTNLNRLIGQIV 249
IERPTYTNLNRL+ Q++
Sbjct: 219 IERPTYTNLNRLVSQVI 235
Score = 91.1 bits (216), Expect = 6e-19
Identities = 39/42 (92%), Positives = 40/42 (95%)
Frame = +2
Query: 509 VVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVP 634
VVPKDVNAA+ TIKTKRTIQFVDWCPTGFK GINYQPPTVVP
Sbjct: 323 VVPKDVNAAVGTIKTKRTIQFVDWCPTGFKCGINYQPPTVVP 364
Score = 39.1 bits (87), Expect = 0.003
Identities = 16/18 (88%), Positives = 18/18 (100%)
Frame = +1
Query: 631 PGGDLAKVQRAVCMLSNT 684
PGGDLAKVQRAVCM+SN+
Sbjct: 364 PGGDLAKVQRAVCMISNS 381
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 165 bits (401), Expect = 2e-41
Identities = 72/89 (80%), Positives = 82/89 (92%)
Frame = +3
Query: 255 ITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFE 434
+TASLRFDGALNVD+TEFQTNLVPYPRIHF L +YAPVISAEKA+HEQLSVAEITN+ FE
Sbjct: 238 LTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFE 297
Query: 435 PANQMVKCDPRHGKYMACCMLYRGESYPR 521
PA+ M KCDPRHGKYMACC++YRG+ P+
Sbjct: 298 PASMMAKCDPRHGKYMACCLMYRGDVVPK 326
Score = 130 bits (315), Expect = 6e-31
Identities = 54/77 (70%), Positives = 71/77 (92%)
Frame = +1
Query: 19 LNYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLD 198
++YGKKSKL F +YP+PQVST+VVEPYNS+L+TH+ LEH+D + ++DNEAIYDICRR+L+
Sbjct: 159 VDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLDNEAIYDICRRSLN 218
Query: 199 IERPTYTNLNRLIGQIV 249
IERPTYTNLNRL+ Q++
Sbjct: 219 IERPTYTNLNRLVSQVI 235
Score = 91.1 bits (216), Expect = 6e-19
Identities = 39/42 (92%), Positives = 40/42 (95%)
Frame = +2
Query: 509 VVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVP 634
VVPKDVNAA+ TIKTKRTIQFVDWCPTGFK GINYQPPTVVP
Sbjct: 323 VVPKDVNAAVGTIKTKRTIQFVDWCPTGFKCGINYQPPTVVP 364
Score = 39.1 bits (87), Expect = 0.003
Identities = 16/18 (88%), Positives = 18/18 (100%)
Frame = +1
Query: 631 PGGDLAKVQRAVCMLSNT 684
PGGDLAKVQRAVCM+SN+
Sbjct: 364 PGGDLAKVQRAVCMISNS 381
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 165 bits (401), Expect = 2e-41
Identities = 72/89 (80%), Positives = 82/89 (92%)
Frame = +3
Query: 255 ITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFE 434
+TASLRFDGALNVD+TEFQTNLVPYPRIHF L +YAPVISAEKA+HEQLSVAEITN+ FE
Sbjct: 238 LTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFE 297
Query: 435 PANQMVKCDPRHGKYMACCMLYRGESYPR 521
PA+ M KCDPRHGKYMACC++YRG+ P+
Sbjct: 298 PASMMAKCDPRHGKYMACCLMYRGDVVPK 326
Score = 130 bits (314), Expect = 8e-31
Identities = 54/77 (70%), Positives = 70/77 (90%)
Frame = +1
Query: 19 LNYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLD 198
++YGKKSKL F +YP+PQVST+VVEPYNS+L+TH+ LEH+D + ++DNEAIYDICRR+L
Sbjct: 159 VDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLDNEAIYDICRRSLS 218
Query: 199 IERPTYTNLNRLIGQIV 249
IERPTYTNLNRL+ Q++
Sbjct: 219 IERPTYTNLNRLVSQVI 235
Score = 91.1 bits (216), Expect = 6e-19
Identities = 39/42 (92%), Positives = 40/42 (95%)
Frame = +2
Query: 509 VVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVP 634
VVPKDVNAA+ TIKTKRTIQFVDWCPTGFK GINYQPPTVVP
Sbjct: 323 VVPKDVNAAVGTIKTKRTIQFVDWCPTGFKCGINYQPPTVVP 364
Score = 39.1 bits (87), Expect = 0.003
Identities = 16/18 (88%), Positives = 18/18 (100%)
Frame = +1
Query: 631 PGGDLAKVQRAVCMLSNT 684
PGGDLAKVQRAVCM+SN+
Sbjct: 364 PGGDLAKVQRAVCMISNS 381
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 165 bits (401), Expect = 2e-41
Identities = 72/89 (80%), Positives = 82/89 (92%)
Frame = +3
Query: 255 ITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFE 434
+TASLRFDGALNVD+TEFQTNLVPYPRIHF L +YAPVISAEKA+HEQLSVAEITN+ FE
Sbjct: 238 LTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFE 297
Query: 435 PANQMVKCDPRHGKYMACCMLYRGESYPR 521
PA+ M KCDPRHGKYMACC++YRG+ P+
Sbjct: 298 PASMMAKCDPRHGKYMACCLMYRGDVVPK 326
Score = 130 bits (314), Expect = 8e-31
Identities = 54/77 (70%), Positives = 70/77 (90%)
Frame = +1
Query: 19 LNYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLD 198
++YGKKSKL F +YP+PQVST+VVEPYNS+L+TH+ LEH+D + ++DNEAIYDICRR+L
Sbjct: 159 VDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLDNEAIYDICRRSLS 218
Query: 199 IERPTYTNLNRLIGQIV 249
IERPTYTNLNRL+ Q++
Sbjct: 219 IERPTYTNLNRLVSQVI 235
Score = 91.1 bits (216), Expect = 6e-19
Identities = 39/42 (92%), Positives = 40/42 (95%)
Frame = +2
Query: 509 VVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVP 634
VVPKDVNAA+ TIKTKRTIQFVDWCPTGFK GINYQPPTVVP
Sbjct: 323 VVPKDVNAAVGTIKTKRTIQFVDWCPTGFKCGINYQPPTVVP 364
Score = 39.1 bits (87), Expect = 0.003
Identities = 16/18 (88%), Positives = 18/18 (100%)
Frame = +1
Query: 631 PGGDLAKVQRAVCMLSNT 684
PGGDLAKVQRAVCM+SN+
Sbjct: 364 PGGDLAKVQRAVCMISNS 381
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 161 bits (391), Expect = 4e-40
Identities = 70/89 (78%), Positives = 79/89 (88%)
Frame = +3
Query: 255 ITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFE 434
+T SLRFDGA+NVD+TEFQTNLVPYPRIHF L +YAPVISA KAYHEQLSV EITNA FE
Sbjct: 238 LTTSLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAAKAYHEQLSVPEITNAVFE 297
Query: 435 PANQMVKCDPRHGKYMACCMLYRGESYPR 521
PA+ M KCDPRHGKYMACC++YRG+ P+
Sbjct: 298 PASMMAKCDPRHGKYMACCLMYRGDVVPK 326
Score = 136 bits (328), Expect = 2e-32
Identities = 60/77 (77%), Positives = 71/77 (92%)
Frame = +1
Query: 19 LNYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLD 198
++YGKKSKL F IYP+PQVSTAVVEPYNS+L+TH+ LEH+D A ++DNEAIYDICRR+LD
Sbjct: 159 VDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLD 218
Query: 199 IERPTYTNLNRLIGQIV 249
IERPTYTNLNRLI QI+
Sbjct: 219 IERPTYTNLNRLISQII 235
Score = 90.6 bits (215), Expect = 8e-19
Identities = 38/42 (90%), Positives = 40/42 (95%)
Frame = +2
Query: 509 VVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVP 634
VVPKDVNAA+ TIKTKRT+QFVDWCPTGFK GINYQPPTVVP
Sbjct: 323 VVPKDVNAAVGTIKTKRTVQFVDWCPTGFKCGINYQPPTVVP 364
Score = 38.7 bits (86), Expect = 0.004
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = +1
Query: 631 PGGDLAKVQRAVCMLSN 681
PGGDLAKVQRAVCM+SN
Sbjct: 364 PGGDLAKVQRAVCMISN 380
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 161 bits (391), Expect = 4e-40
Identities = 70/89 (78%), Positives = 79/89 (88%)
Frame = +3
Query: 255 ITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFE 434
+T SLRFDGA+NVD+TEFQTNLVPYPRIHF L +YAPVISA KAYHEQLSV EITNA FE
Sbjct: 238 LTTSLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAAKAYHEQLSVPEITNAVFE 297
Query: 435 PANQMVKCDPRHGKYMACCMLYRGESYPR 521
PA+ M KCDPRHGKYMACC++YRG+ P+
Sbjct: 298 PASMMAKCDPRHGKYMACCLMYRGDVVPK 326
Score = 136 bits (328), Expect = 2e-32
Identities = 60/77 (77%), Positives = 71/77 (92%)
Frame = +1
Query: 19 LNYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLD 198
++YGKKSKL F IYP+PQVSTAVVEPYNS+L+TH+ LEH+D A ++DNEAIYDICRR+LD
Sbjct: 159 VDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLD 218
Query: 199 IERPTYTNLNRLIGQIV 249
IERPTYTNLNRLI QI+
Sbjct: 219 IERPTYTNLNRLISQII 235
Score = 90.6 bits (215), Expect = 8e-19
Identities = 38/42 (90%), Positives = 40/42 (95%)
Frame = +2
Query: 509 VVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVP 634
VVPKDVNAA+ TIKTKRT+QFVDWCPTGFK GINYQPPTVVP
Sbjct: 323 VVPKDVNAAVGTIKTKRTVQFVDWCPTGFKCGINYQPPTVVP 364
Score = 38.7 bits (86), Expect = 0.004
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = +1
Query: 631 PGGDLAKVQRAVCMLSN 681
PGGDLAKVQRAVCM+SN
Sbjct: 364 PGGDLAKVQRAVCMISN 380
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 155 bits (377), Expect = 2e-38
Identities = 66/89 (74%), Positives = 77/89 (86%)
Frame = +3
Query: 255 ITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFE 434
+T SLRFDGA+NVD+TEFQTNLVPYPRIHF L +YAPVIS+ KAYHEQ SV EIT + FE
Sbjct: 238 LTTSLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISSAKAYHEQFSVPEITTSVFE 297
Query: 435 PANQMVKCDPRHGKYMACCMLYRGESYPR 521
P+N M KCDPRHGKYMACC++YRG+ P+
Sbjct: 298 PSNMMAKCDPRHGKYMACCLMYRGDVVPK 326
Score = 129 bits (311), Expect = 2e-30
Identities = 56/77 (72%), Positives = 69/77 (89%)
Frame = +1
Query: 19 LNYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLD 198
+++GKKSKL F IYP+PQVSTAVVEPYNS+L+TH+ LEH+D ++DNEAIYDICRR+LD
Sbjct: 159 VDFGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVVVLLDNEAIYDICRRSLD 218
Query: 199 IERPTYTNLNRLIGQIV 249
IERPTY+NLNRLI Q +
Sbjct: 219 IERPTYSNLNRLISQTI 235
Score = 85.4 bits (202), Expect = 3e-17
Identities = 36/42 (85%), Positives = 38/42 (90%)
Frame = +2
Query: 509 VVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVP 634
VVPKDVN A+A IK KRTIQFVDWCPTGFK GINYQPP+VVP
Sbjct: 323 VVPKDVNTAVAAIKAKRTIQFVDWCPTGFKCGINYQPPSVVP 364
Score = 39.1 bits (87), Expect = 0.003
Identities = 19/26 (73%), Positives = 21/26 (80%)
Frame = +1
Query: 604 YQLPATHRGPGGDLAKVQRAVCMLSN 681
YQ P+ PGGDLAKVQRAVCM+SN
Sbjct: 357 YQPPSVV--PGGDLAKVQRAVCMISN 380
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 83.8 bits (198), Expect = 1e-16
Identities = 35/85 (41%), Positives = 53/85 (62%)
Frame = +3
Query: 255 ITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFE 434
+T SLRF G LN DL + NL+P+PR+HF +V +AP+ S + L+V E+T ++
Sbjct: 237 VTCSLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYISLTVPELTQQMWD 296
Query: 435 PANQMVKCDPRHGKYMACCMLYRGE 509
N M DPRHG+Y+ ++RG+
Sbjct: 297 SKNMMCAADPRHGRYLTASAIFRGQ 321
Score = 77.4 bits (182), Expect = 8e-15
Identities = 32/71 (45%), Positives = 50/71 (70%)
Frame = +1
Query: 25 YGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIE 204
Y + L F+++P+P+VS VVEPYN+ L+ H +E++D ++DNEA+YDIC R L +
Sbjct: 160 YPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLS 219
Query: 205 RPTYTNLNRLI 237
P++ +LN LI
Sbjct: 220 TPSFGDLNHLI 230
Score = 28.3 bits (60), Expect = 5.0
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +2
Query: 518 KDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 622
K+V+ I I+ K + FV+W P K + PP
Sbjct: 325 KEVDEQILNIQNKNSSYFVEWIPNNVKSSVCDIPP 359
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 83.4 bits (197), Expect = 1e-16
Identities = 35/85 (41%), Positives = 53/85 (62%)
Frame = +3
Query: 255 ITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFE 434
+T SLRF G LN DL + NL+P+PR+HF +V +AP+ S + L+V E+T ++
Sbjct: 237 VTCSLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYISLTVPELTQQMWD 296
Query: 435 PANQMVKCDPRHGKYMACCMLYRGE 509
N M DPRHG+Y+ ++RG+
Sbjct: 297 AKNMMCAADPRHGRYLTASAMFRGK 321
Score = 77.4 bits (182), Expect = 8e-15
Identities = 32/71 (45%), Positives = 50/71 (70%)
Frame = +1
Query: 25 YGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIE 204
Y + L F+++P+P+VS VVEPYN+ L+ H +E++D ++DNEA+YDIC R L +
Sbjct: 160 YPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLS 219
Query: 205 RPTYTNLNRLI 237
P++ +LN LI
Sbjct: 220 TPSFGDLNHLI 230
Score = 30.7 bits (66), Expect = 0.94
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +2
Query: 518 KDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPEAT 643
K+V+ I ++ K + FV+W P K + PPT + A+
Sbjct: 325 KEVDEQILNVQNKNSSYFVEWIPNNVKSSVCDIPPTGIKMAS 366
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 83.0 bits (196), Expect = 2e-16
Identities = 35/85 (41%), Positives = 52/85 (61%)
Frame = +3
Query: 255 ITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFE 434
+T LRF G LN DL + NL+P+PR+HF +V +AP+ S + LSV E+T ++
Sbjct: 236 VTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYSALSVPELTQQMWD 295
Query: 435 PANQMVKCDPRHGKYMACCMLYRGE 509
N M DPRHG+Y+ ++RG+
Sbjct: 296 AKNMMCAADPRHGRYLTASAVFRGK 320
Score = 78.2 bits (184), Expect = 5e-15
Identities = 32/71 (45%), Positives = 50/71 (70%)
Frame = +1
Query: 25 YGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIE 204
Y + + F+++P+P+VS VVEPYN+ L+ H +E++D ++DNEA+YDIC R L +
Sbjct: 159 YPDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLA 218
Query: 205 RPTYTNLNRLI 237
PT+ +LN LI
Sbjct: 219 NPTFGDLNHLI 229
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 83.0 bits (196), Expect = 2e-16
Identities = 35/85 (41%), Positives = 52/85 (61%)
Frame = +3
Query: 255 ITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFE 434
+T LRF G LN DL + NL+P+PR+HF +V +AP+ S + LSV E+T ++
Sbjct: 236 VTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYSALSVPELTQQMWD 295
Query: 435 PANQMVKCDPRHGKYMACCMLYRGE 509
N M DPRHG+Y+ ++RG+
Sbjct: 296 AKNMMCAADPRHGRYLTASAVFRGK 320
Score = 78.2 bits (184), Expect = 5e-15
Identities = 32/71 (45%), Positives = 50/71 (70%)
Frame = +1
Query: 25 YGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIE 204
Y + + F+++P+P+VS VVEPYN+ L+ H +E++D ++DNEA+YDIC R L +
Sbjct: 159 YPDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLA 218
Query: 205 RPTYTNLNRLI 237
PT+ +LN LI
Sbjct: 219 NPTFGDLNHLI 229
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 82.6 bits (195), Expect = 2e-16
Identities = 34/85 (40%), Positives = 52/85 (61%)
Frame = +3
Query: 255 ITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFE 434
+T LRF G LN DL + NL+P+PR+HF +V +AP+ S + L+V E+T ++
Sbjct: 236 VTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRSLTVPELTQQMWD 295
Query: 435 PANQMVKCDPRHGKYMACCMLYRGE 509
N M DPRHG+Y+ ++RG+
Sbjct: 296 SKNMMCAADPRHGRYLTASAMFRGK 320
Score = 77.0 bits (181), Expect = 1e-14
Identities = 32/71 (45%), Positives = 50/71 (70%)
Frame = +1
Query: 25 YGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIE 204
Y + L F+++P+P+VS VVEPYN+ L+ H +E++D ++DNEA+YDIC R L +
Sbjct: 159 YPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLT 218
Query: 205 RPTYTNLNRLI 237
P++ +LN LI
Sbjct: 219 TPSFGDLNHLI 229
Score = 27.9 bits (59), Expect = 6.6
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = +2
Query: 518 KDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPT 625
K+V+ + ++ K + FV+W P K + PPT
Sbjct: 324 KEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIPPT 359
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 82.6 bits (195), Expect = 2e-16
Identities = 34/85 (40%), Positives = 52/85 (61%)
Frame = +3
Query: 255 ITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFE 434
+T LRF G LN DL + NL+P+PR+HF +V +AP+ S + L+V E+T ++
Sbjct: 236 VTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRSLTVPELTQQMWD 295
Query: 435 PANQMVKCDPRHGKYMACCMLYRGE 509
N M DPRHG+Y+ ++RG+
Sbjct: 296 SKNMMCAADPRHGRYLTASAMFRGK 320
Score = 77.0 bits (181), Expect = 1e-14
Identities = 32/71 (45%), Positives = 50/71 (70%)
Frame = +1
Query: 25 YGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIE 204
Y + L F+++P+P+VS VVEPYN+ L+ H +E++D ++DNEA+YDIC R L +
Sbjct: 159 YPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLT 218
Query: 205 RPTYTNLNRLI 237
P++ +LN LI
Sbjct: 219 TPSFGDLNHLI 229
Score = 27.9 bits (59), Expect = 6.6
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = +2
Query: 518 KDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPT 625
K+V+ + ++ K + FV+W P K + PPT
Sbjct: 324 KEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIPPT 359
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 82.6 bits (195), Expect = 2e-16
Identities = 34/85 (40%), Positives = 52/85 (61%)
Frame = +3
Query: 255 ITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFE 434
+T LRF G LN DL + NL+P+PR+HF +V +AP+ S + L+V E+T ++
Sbjct: 236 VTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRNLTVPELTQQMWD 295
Query: 435 PANQMVKCDPRHGKYMACCMLYRGE 509
N M DPRHG+Y+ ++RG+
Sbjct: 296 AKNMMCAADPRHGRYLTASAMFRGK 320
Score = 76.6 bits (180), Expect = 1e-14
Identities = 31/71 (43%), Positives = 50/71 (70%)
Frame = +1
Query: 25 YGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIE 204
Y + + F+++P+P+VS VVEPYN+ L+ H +E++D ++DNEA+YDIC R L +
Sbjct: 159 YPDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLS 218
Query: 205 RPTYTNLNRLI 237
P++ +LN LI
Sbjct: 219 TPSFGDLNHLI 229
Score = 27.9 bits (59), Expect = 6.6
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = +2
Query: 518 KDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPT 625
K+V+ + ++ K + FV+W P K + PPT
Sbjct: 324 KEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIPPT 359
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 82.2 bits (194), Expect = 3e-16
Identities = 34/85 (40%), Positives = 52/85 (61%)
Frame = +3
Query: 255 ITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFE 434
+T LRF G LN DL + NL+P+PR+HF +V +AP+ S + L+V E+T ++
Sbjct: 236 VTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWD 295
Query: 435 PANQMVKCDPRHGKYMACCMLYRGE 509
N M DPRHG+Y+ ++RG+
Sbjct: 296 AKNMMCAADPRHGRYLTASAMFRGK 320
Score = 77.0 bits (181), Expect = 1e-14
Identities = 32/71 (45%), Positives = 50/71 (70%)
Frame = +1
Query: 25 YGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIE 204
Y + L F+++P+P+VS VVEPYN+ L+ H +E++D ++DNEA+YDIC R L +
Sbjct: 159 YPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLT 218
Query: 205 RPTYTNLNRLI 237
P++ +LN LI
Sbjct: 219 TPSFGDLNHLI 229
Score = 27.9 bits (59), Expect = 6.6
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = +2
Query: 518 KDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPT 625
K+V+ + ++ K + FV+W P K + PPT
Sbjct: 324 KEVDEQMINVQNKNSSYFVEWIPNNVKSTVCDIPPT 359
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 82.2 bits (194), Expect = 3e-16
Identities = 34/85 (40%), Positives = 52/85 (61%)
Frame = +3
Query: 255 ITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFE 434
+T LRF G LN DL + NL+P+PR+HF +V +AP+ S + L+V E+T ++
Sbjct: 236 VTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWD 295
Query: 435 PANQMVKCDPRHGKYMACCMLYRGE 509
N M DPRHG+Y+ ++RG+
Sbjct: 296 SKNMMCAADPRHGRYLTASAMFRGK 320
Score = 77.0 bits (181), Expect = 1e-14
Identities = 32/71 (45%), Positives = 50/71 (70%)
Frame = +1
Query: 25 YGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIE 204
Y + L F+++P+P+VS VVEPYN+ L+ H +E++D ++DNEA+YDIC R L +
Sbjct: 159 YPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLT 218
Query: 205 RPTYTNLNRLI 237
P++ +LN LI
Sbjct: 219 TPSFGDLNHLI 229
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 52.4 bits (120), Expect = 3e-07
Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Frame = +1
Query: 25 YGKKSKLEFAIYPAP-QVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDI 201
Y KK ++++P + S VV+PYNS+LT ++DC ++DN A+ I L +
Sbjct: 161 YSKKLVQTYSVFPNQMETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHL 220
Query: 202 ERPTYTNLNRLIGQIV 249
PT+ N L+ ++
Sbjct: 221 TNPTFAQTNSLVSTVM 236
Score = 42.7 bits (96), Expect = 2e-04
Identities = 29/110 (26%), Positives = 48/110 (43%), Gaps = 6/110 (5%)
Frame = +3
Query: 207 PNLHQPESSHRTDCLLITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPV-ISAEK 383
P Q S T T +LR+ G +N DL +L+P PR HF + Y P+ + +
Sbjct: 223 PTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQA 282
Query: 384 AYHEQLSVAEITNACFEPANQMVKCDPRH-----GKYMACCMLYRGESYP 518
+ +V ++ + N MV R+ KY++ + +GE P
Sbjct: 283 NVIRKTTVLDVMRRLLQTKNIMVSSYARNKEASQAKYISILNIIQGEVDP 332
Score = 31.5 bits (68), Expect = 0.54
Identities = 11/40 (27%), Positives = 23/40 (57%)
Frame = +2
Query: 509 VVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTV 628
V P V+ ++ I+ ++ + F+DW P +V ++ + P V
Sbjct: 330 VDPTQVHESLQRIRERKLVNFIDWGPASIQVALSKKSPYV 369
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 52.0 bits (119), Expect = 4e-07
Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Frame = +1
Query: 25 YGKKSKLEFAIYPAP-QVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDI 201
Y KK ++++P + S VV+PYNS+LT ++DC ++DN A+ I L +
Sbjct: 161 YSKKLVQTYSVFPNQMETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALGRIAVERLHL 220
Query: 202 ERPTYTNLNRLIGQIV 249
PT+ N L+ ++
Sbjct: 221 TNPTFAQTNSLVSTVM 236
Score = 42.7 bits (96), Expect = 2e-04
Identities = 29/110 (26%), Positives = 48/110 (43%), Gaps = 6/110 (5%)
Frame = +3
Query: 207 PNLHQPESSHRTDCLLITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPV-ISAEK 383
P Q S T T +LR+ G +N DL +L+P PR HF + Y P+ + +
Sbjct: 223 PTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQA 282
Query: 384 AYHEQLSVAEITNACFEPANQMVKCDPRH-----GKYMACCMLYRGESYP 518
+ +V ++ + N MV R+ KY++ + +GE P
Sbjct: 283 NVIRKTTVLDVMRRLLQTKNIMVSSYARNKEASQAKYISILNIIQGEVDP 332
>At1g70140.1 68414.m08071 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 760
Score = 33.9 bits (74), Expect = 0.10
Identities = 17/42 (40%), Positives = 21/42 (50%)
Frame = +2
Query: 260 CFFEIRRRSECGPHRVPD*LGALPPYPLPTGHVRASHLCREG 385
C RRR GP RV + L PP P+ + V + L REG
Sbjct: 100 CIIARRRRDRVGPVRVENTLPPYPPPPMTSAAVTTTTLAREG 141
>At1g01190.1 68414.m00032 cytochrome P450, putative similar to
cytochrome P450 SP:O48927 from [Glycine max]
Length = 535
Score = 31.1 bits (67), Expect = 0.71
Identities = 18/47 (38%), Positives = 27/47 (57%)
Frame = +3
Query: 285 LNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNA 425
+++D NL+P PR FPLV + S+ A+ SVAE++NA
Sbjct: 62 ISLDYNRKYKNLIPGPR-GFPLVGSMSLRSSHVAHQRIASVAEMSNA 107
>At1g29200.1 68414.m03573 hypothetical protein contains Pfam
PF03138: Plant protein family. The function of this
family of plant proteins is unknown;
Length = 698
Score = 30.3 bits (65), Expect = 1.2
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = -1
Query: 616 LVVDTDLETGWTPVDELDSTLGFDGSDGRVHILGY 512
LV DT+L TPVD ++ L G VH+ GY
Sbjct: 360 LVTDTELVKEATPVDYIEHVLPLLKKYGMVHLFGY 394
>At3g57510.1 68416.m06402 endo-polygalacturonase (ADPG1) identical
to endo-polygalacturonase [Arabidopsis thaliana]
GI:2597824
Length = 431
Score = 29.9 bits (64), Expect = 1.6
Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Frame = -2
Query: 201 NVEITA---ADVIDGFIVDHESTVRVLKGCVGGEDRVVGLDDGSGNLR 67
NVEITA + DG + + +RV +G D + ++DG+ NL+
Sbjct: 230 NVEITAPGDSPNTDGIHITNTQNIRVSNSDIGTGDDCISIEDGTQNLQ 277
>At1g61140.1 68414.m06888 SNF2 domain-containing protein / helicase
domain-containing protein / zinc finger protein-related
similar to ATPase [Homo sapiens] GI:531196; contains
Pfam profiles PF00271: Helicase conserved C-terminal
domain, PF00176: SNF2 family N-terminal domain, PF00097:
Zinc finger, C3HC4 type (RING finger)
Length = 1287
Score = 29.9 bits (64), Expect = 1.6
Identities = 27/127 (21%), Positives = 49/127 (38%), Gaps = 6/127 (4%)
Frame = +1
Query: 16 PLNYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSD------CAFMVDNEAIYD 177
P+++ + F P VS A V+PYNS +H D C+F DN+ ++
Sbjct: 284 PIDFSSARGISFKFESNPSVSPACVKPYNS-FDSHLADSDLDRPNNYSCSFQ-DNKTVHV 341
Query: 178 ICRRNLDIERPTYTNLNRLIGQIVXXXXXXXXXXXXXMWTSPSSRLTWCLTPVSTSHWSR 357
+ + E+ Y+++ G+ W+ SS T + +
Sbjct: 342 KVKPEAESEKVVYSSVP---GEFSVRDDAYLSGETNRWWSGASSSAVSYQTDIEKGYSYM 398
Query: 358 TRQSSLP 378
Q++LP
Sbjct: 399 APQTALP 405
>At2g07360.1 68415.m00843 SH3 domain-containing protein contains
Pfam profile PF00018: SH3 domain
Length = 1196
Score = 28.7 bits (61), Expect = 3.8
Identities = 17/50 (34%), Positives = 29/50 (58%), Gaps = 3/50 (6%)
Frame = +3
Query: 540 LPSKPSVLSNSSTGVQPVSRSVSTTS---HPPWSRRRLGQGSTCRLHVVQ 680
+P++ + S SST QP S S S++S HP ++ LG+ + R ++Q
Sbjct: 20 VPAQSTSSSASSTASQPTSASASSSSHLHHPMSTKTTLGEKKSKRATLMQ 69
>At1g58250.1 68414.m06624 SABRE, putative similar to SABRE (GI:719291)
[Arabidopsis thaliana]
Length = 2603
Score = 28.7 bits (61), Expect = 3.8
Identities = 12/24 (50%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
Frame = +2
Query: 602 GINYQPPTVVPE-ATWPRFNVPSA 670
G+NY PP + + WPRF VP A
Sbjct: 1464 GLNYYPPHKLRSFSRWPRFGVPRA 1487
>At5g04230.1 68418.m00412 phenylalanine ammonia-lyase 3 (PAL3)
nearly identical to SP|P45725
Length = 698
Score = 28.3 bits (60), Expect = 5.0
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = +1
Query: 562 YPIRRLVSNRFQGRYQLPATHRGPGGDLAKVQRAV 666
YP+ R V N + R R PG D KV RA+
Sbjct: 640 YPLYRFVRNELETRLLTGEDVRSPGEDFDKVFRAI 674
>At3g52500.1 68416.m05773 aspartyl protease family protein contains
Pfam PF00026: eukaryotic aspartyl protease
Length = 469
Score = 28.3 bits (60), Expect = 5.0
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = +3
Query: 555 SVLSNSSTGVQPVSRSVSTTSHPPWSRRRLGQGSTCRLHVVQH 683
SV+S + P S S + P S RRL + S R H ++H
Sbjct: 14 SVVSAVKLPLSPFSHSDQSPKDPYLSLRRLAESSIARAHKLKH 56
>At2g15020.1 68415.m01710 expressed protein and genefinder
Length = 526
Score = 28.3 bits (60), Expect = 5.0
Identities = 18/59 (30%), Positives = 29/59 (49%)
Frame = +3
Query: 279 GALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVK 455
G N+ L +F ++L+P + F T A + K Y LS+ N+ E N++VK
Sbjct: 212 GLGNLGLKQFSSSLMPRHSLGFSYATEAHGLWILKGYFPILSMNVTNNSSNEVHNKIVK 270
>At1g62870.1 68414.m07099 expressed protein
Length = 796
Score = 28.3 bits (60), Expect = 5.0
Identities = 18/46 (39%), Positives = 20/46 (43%), Gaps = 2/46 (4%)
Frame = +1
Query: 310 RLTWCLTPVSTSHWSRTRQSSLPRR--PTMNSFPSPRSQTHASSPP 441
R + C S S+ SRT L R P NS P P S S PP
Sbjct: 80 RCSLCDAVFSASNPSRTASEHLKRGTCPNFNSLPKPISTISPSPPP 125
>At5g58890.1 68418.m07378 MADS-box family protein various predicted
proteins, Oryza sativa and Arabidopsis thaliana
Length = 294
Score = 27.9 bits (59), Expect = 6.6
Identities = 14/55 (25%), Positives = 26/55 (47%)
Frame = -1
Query: 643 SRLRDHGGWLVVDTDLETGWTPVDELDSTLGFDGSDGRVHILGYDSPRYSIQQAM 479
S + H G + +D +L WT + S + G+DG + + P Y+ +Q +
Sbjct: 199 SLISPHDGQIQMDPNLMEKWTDLALTQSLMMSKGNDGTQFMQRQEQPYYNREQVV 253
>At3g11690.1 68416.m01433 expressed protein
Length = 252
Score = 27.9 bits (59), Expect = 6.6
Identities = 20/61 (32%), Positives = 29/61 (47%)
Frame = +1
Query: 328 TPVSTSHWSRTRQSSLPRRPTMNSFPSPRSQTHASSPPTRW*NATPVMASTWLAVCCTVV 507
TP S+ S RQ L R +++S PSPR+ S+P T A+ W C +V
Sbjct: 21 TPSSSPSRSNRRQPLLQR--SLSS-PSPRASCGGSTPAEFCGGTTASCAAVWCCCPCGLV 77
Query: 508 S 510
+
Sbjct: 78 N 78
>At5g63040.2 68418.m07909 expressed protein similar to unknown
protein (emb|CAB81845.1)
Length = 366
Score = 27.5 bits (58), Expect = 8.8
Identities = 17/61 (27%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Frame = -1
Query: 610 VDTDLETGWTPVDELDSTLGFDGSDGRVHILGYDSPRYSIQQAMYLP*RGSHF--TIWLA 437
V + T TP D+ DST+ ++ +DG+ + + +PR + + P S + +WL
Sbjct: 96 VSPQIGTEATPRDD-DSTIQYNRNDGKPGFISFYNPRNKTEDIIIPPETQSPWGRLLWLI 154
Query: 436 G 434
G
Sbjct: 155 G 155
>At5g63040.1 68418.m07908 expressed protein similar to unknown
protein (emb|CAB81845.1)
Length = 366
Score = 27.5 bits (58), Expect = 8.8
Identities = 17/61 (27%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Frame = -1
Query: 610 VDTDLETGWTPVDELDSTLGFDGSDGRVHILGYDSPRYSIQQAMYLP*RGSHF--TIWLA 437
V + T TP D+ DST+ ++ +DG+ + + +PR + + P S + +WL
Sbjct: 96 VSPQIGTEATPRDD-DSTIQYNRNDGKPGFISFYNPRNKTEDIIIPPETQSPWGRLLWLI 154
Query: 436 G 434
G
Sbjct: 155 G 155
>At5g25280.2 68418.m02999 serine-rich protein-related contains some
similarity to serine-rich proteins
Length = 220
Score = 27.5 bits (58), Expect = 8.8
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = +2
Query: 191 ISTLSAQPTPT*IVSSDRLSPHHCFFEIRRRSECGPHRVP 310
I S P + VSS++ S HH + RRR C P P
Sbjct: 95 IDNRSISPNRSIAVSSNKPSNHHKIPDSRRRCMCSPTTHP 134
>At5g25280.1 68418.m02998 serine-rich protein-related contains some
similarity to serine-rich proteins
Length = 220
Score = 27.5 bits (58), Expect = 8.8
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = +2
Query: 191 ISTLSAQPTPT*IVSSDRLSPHHCFFEIRRRSECGPHRVP 310
I S P + VSS++ S HH + RRR C P P
Sbjct: 95 IDNRSISPNRSIAVSSNKPSNHHKIPDSRRRCMCSPTTHP 134
>At5g12400.1 68418.m01458 PHD finger transcription factor, putative
similarity to predicted proteins, Arabidopsis thaliana
Length = 1595
Score = 27.5 bits (58), Expect = 8.8
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +1
Query: 502 VVSRTQGCERGHRYHQNQAYYPIRRLVSNRFQGRYQL 612
++SR G ER H++H+ + Y P+ S+ Q + L
Sbjct: 1499 LLSRKAGNERVHQFHRERYYVPLENSDSDHDQPKCHL 1535
>At3g01770.1 68416.m00116 DNA-binding bromodomain-containing protein
contains bromodomain, INTERPRO:IPR001487
Length = 620
Score = 27.5 bits (58), Expect = 8.8
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = -2
Query: 159 VDHESTVRVLKGCVGGEDRVVGLDDGSGNLRRGVDG 52
+ H STVR K VGG +++ G +L G DG
Sbjct: 394 ISHISTVRTEKDSVGGLNQMEDASRGKLSLIEGADG 429
>At2g30670.1 68415.m03740 tropinone reductase, putative / tropine
dehydrogenase, putative similar to tropinone reductase
SP:P50165 from [Datura stramonium]
Length = 262
Score = 27.5 bits (58), Expect = 8.8
Identities = 24/63 (38%), Positives = 31/63 (49%), Gaps = 4/63 (6%)
Frame = +3
Query: 228 SSH-RTDCLLITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISA--EKAYH-E 395
SSH + L+ T S FDG LN+ L + P P I + ++ IS E AYH
Sbjct: 68 SSHSERETLMQTVSKMFDGKLNI-LVNNVGVVNPKPTIEYVAADFSFSISTNLESAYHLS 126
Query: 396 QLS 404
QLS
Sbjct: 127 QLS 129
>At1g21090.1 68414.m02638 hydroxyproline-rich glycoprotein family
protein
Length = 242
Score = 27.5 bits (58), Expect = 8.8
Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Frame = +1
Query: 295 TSPSSR-LTWCLTPVSTSHWSRTRQSSLPRRPTMNSFPSPRSQTHASSPPTRW*NATPVM 471
T P+S TW + + ++S T +SLP+ +N + + A+SPP++ PV
Sbjct: 82 TKPNSTSFTWYPSRTGSYYFSFTNNTSLPKTCQLNQKLTVQVILAAASPPSQPPATAPVP 141
Query: 472 AS 477
S
Sbjct: 142 VS 143
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,803,537
Number of Sequences: 28952
Number of extensions: 396542
Number of successful extensions: 1455
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 1302
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1455
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1447936096
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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