Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10880X
         (353 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    26   0.099
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    23   1.2  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    20   6.5  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    20   8.6  
AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.     20   8.6  

>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 26.2 bits (55), Expect = 0.099
 Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 2/68 (2%)
 Frame = +1

Query: 91  ELEHLLAHSDARIKLIVTDGVFSMDGTVAPIKGLRDLADKYRALLVVDDSHATG--FSGK 264
           E+E  L    A   +  T G  ++ G   PI+ + D+  KY+  L VD +   G   S K
Sbjct: 274 EIERSLREGAAPFMVSATAGT-TVIGAFDPIEKIADVCQKYKLWLHVDAAWGGGALVSAK 332

Query: 265 LAEALKSI 288
               LK I
Sbjct: 333 HRHLLKGI 340


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 22.6 bits (46), Expect = 1.2
 Identities = 17/55 (30%), Positives = 25/55 (45%)
 Frame = +1

Query: 67  RYPHRDLTELEHLLAHSDARIKLIVTDGVFSMDGTVAPIKGLRDLADKYRALLVV 231
           R+    L++L  +  ++D    L+VTD     D    P +GL  L D  R  L V
Sbjct: 179 RHGLETLSQLMDVYPNNDGTKCLVVTDEASISDAPFFPHRGL--LLDTARNFLTV 231


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 20.2 bits (40), Expect = 6.5
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = -2

Query: 238 CHQLLIKLCIYPPDPSDLLLEPQ 170
           C++LL  L I+P   ++ LL  +
Sbjct: 324 CYKLLSNLGIFPKTTNEQLLRKE 346


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 19.8 bits (39), Expect = 8.6
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = -1

Query: 254  KPVAWLSSTTNKALYLSARSLR 189
            KP  W SSTT    + +  + R
Sbjct: 1038 KPSTWWSSTTTSPWWTTTTTRR 1059


>AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.
          Length = 301

 Score = 19.8 bits (39), Expect = 8.6
 Identities = 6/21 (28%), Positives = 13/21 (61%)
 Frame = +3

Query: 15  EPRVHNRRDQAMQGAEIPIPS 77
           +P   + +DQ M   ++P+P+
Sbjct: 235 DPEDDDDKDQDMDEGDLPLPA 255


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,972
Number of Sequences: 336
Number of extensions: 1529
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  7087595
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)