Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10880X
(353 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_0921 + 21586034-21586229,21586464-21586576,21586768-215868... 65 1e-11
01_06_0628 + 30707353-30707548,30707846-30707958,30708090-307081... 61 3e-10
01_07_0050 - 40751994-40752086,40752193-40752300,40752501-407526... 51 3e-07
01_07_0051 - 40759529-40759624,40759728-40759835,40759972-407601... 50 4e-07
01_07_0052 - 40767252-40767347,40767455-40767562,40767689-407678... 50 7e-07
11_04_0455 + 17903921-17904046,17904149-17904214,17905028-179051... 48 2e-06
10_02_0148 - 5859664-5859828,5859916-5860043,5860310-5860451,586... 48 3e-06
02_05_1150 + 34481965-34482076,34482174-34482268,34482380-344824... 46 6e-06
03_02_0387 - 8016399-8016575,8016661-8016788,8017073-8017214,801... 42 1e-04
08_02_0707 - 20212190-20214592 28 2.4
03_05_1017 + 29730531-29730738,29730839-29730885,29731415-29731549 28 2.4
11_05_0032 - 18496314-18496920,18496949-18497121 27 4.2
11_04_0205 + 14860857-14861534,14862585-14862975,14863069-148631... 27 5.6
10_08_0532 + 18580579-18580746,18581923-18581997,18582659-185838... 27 5.6
09_05_0016 + 20089545-20089748,20090072-20090263,20090644-200908... 27 5.6
08_01_1050 - 10649434-10651917 27 5.6
08_01_0465 + 4099721-4100556,4101505-4103614 27 5.6
06_01_0276 + 2035763-2036770 27 5.6
01_06_0402 - 29044205-29044540,29044626-29044898,29044982-29045416 27 5.6
06_03_0930 - 26038341-26038508,26039114-26039254,26040799-260408... 26 7.4
03_02_0199 - 6347980-6348225,6348300-6348341,6348824-6348978,634... 26 7.4
04_04_1034 + 30275708-30276022,30276354-30276440,30276833-302768... 26 9.8
03_04_0024 + 16556026-16556588,16556757-16556868 26 9.8
02_02_0207 - 7845072-7845102,7845235-7845341,7845444-7845521,784... 26 9.8
>10_08_0921 +
21586034-21586229,21586464-21586576,21586768-21586875,
21586967-21587205,21587301-21587399,21587448-21587535,
21587617-21587750,21588274-21588362,21588718-21588751,
21588830-21588898,21589216-21589339
Length = 430
Score = 65.3 bits (152), Expect = 1e-11
Identities = 46/110 (41%), Positives = 59/110 (53%), Gaps = 23/110 (20%)
Frame = +1
Query: 4 SDALNHASIIDGIRLCKAQK----YRYPHRDLTELEHLLAHSDARIKLIVTDG------- 150
SDALNHASIIDGIRL + Q+ + Y H D++ LE LL+ K++VTD
Sbjct: 181 SDALNHASIIDGIRLVERQQEVVSFVYKHCDMSHLELLLSSCSMEKKVVVTDRQVIHPSK 240
Query: 151 ------------VFSMDGTVAPIKGLRDLADKYRALLVVDDSHATGFSGK 264
+FSMDG AP+ L L KY LLV+DD+H T G+
Sbjct: 241 FHHLRSIYSLYYLFSMDGDFAPLPELVKLRRKYGFLLVIDDAHGTLVCGE 290
>01_06_0628 +
30707353-30707548,30707846-30707958,30708090-30708197,
30708305-30708543,30708774-30708861,30708942-30709075,
30709285-30709498,30709671-30709759,30710194-30710262,
30710560-30710683
Length = 457
Score = 60.9 bits (141), Expect = 3e-10
Identities = 41/91 (45%), Positives = 51/91 (56%), Gaps = 4/91 (4%)
Frame = +1
Query: 4 SDALNHASIIDGIRLCKAQK----YRYPHRDLTELEHLLAHSDARIKLIVTDGVFSMDGT 171
SDALNHASIIDGIRL + Q+ + Y H D+ L+ LL +FSMDG
Sbjct: 181 SDALNHASIIDGIRLVERQQEVVAFVYKHCDMHHLDFLL--------------LFSMDGD 226
Query: 172 VAPIKGLRDLADKYRALLVVDDSHATGFSGK 264
AP+ L L KY LLV+DD+H T G+
Sbjct: 227 FAPLPELVKLRRKYGFLLVIDDAHGTLVCGE 257
>01_07_0050 -
40751994-40752086,40752193-40752300,40752501-40752667,
40752756-40752882,40752984-40753145,40753674-40753837,
40753931-40754024,40754160-40754284,40754387-40754532,
40754676-40754764,40755524-40755589,40755990-40756148
Length = 499
Score = 50.8 bits (116), Expect = 3e-07
Identities = 29/98 (29%), Positives = 49/98 (50%), Gaps = 10/98 (10%)
Frame = +1
Query: 1 ISDALNHASIIDGIRLCKAQKYRYPHRDLTELEHLL----------AHSDARIKLIVTDG 150
ISD+LNH SI+ G R A + H + LE LL H + L++ +G
Sbjct: 200 ISDSLNHNSIVSGARASGATIRVFEHNNPAHLEKLLREQISGGQPRTHRAWKKILVIVEG 259
Query: 151 VFSMDGTVAPIKGLRDLADKYRALLVVDDSHATGFSGK 264
++SM+G + + + + KY+ +D++H+ G GK
Sbjct: 260 IYSMEGELCKLPEIISVCKKYKVYTYMDEAHSIGAVGK 297
>01_07_0051 -
40759529-40759624,40759728-40759835,40759972-40760138,
40760670-40760796,40760885-40761046,40761235-40761398,
40761561-40761654,40761736-40761860,40762304-40762449,
40762796-40762884,40763453-40763518,40763824-40763973
Length = 497
Score = 50.4 bits (115), Expect = 4e-07
Identities = 30/98 (30%), Positives = 52/98 (53%), Gaps = 10/98 (10%)
Frame = +1
Query: 1 ISDALNHASIIDGIRLCKAQKYRYPHRDLTELEHLLAHSDA--------RIK--LIVTDG 150
ISD+LNH SI++G R A + H + LE +L A R K +++ +G
Sbjct: 197 ISDSLNHNSIVNGARGSGASVQVFQHNNPAHLEEVLREQIAGGQPRTHRRWKKIIVIVEG 256
Query: 151 VFSMDGTVAPIKGLRDLADKYRALLVVDDSHATGFSGK 264
++SM+G + + + + KY+A +D++H+ G GK
Sbjct: 257 IYSMEGELCKLPEIVAVCKKYKAYTYLDEAHSIGAVGK 294
>01_07_0052 -
40767252-40767347,40767455-40767562,40767689-40767855,
40767930-40768056,40768138-40768299,40768467-40768630,
40768722-40768815,40768892-40769016,40769110-40769255,
40769361-40769449,40769564-40769608,40770165-40770230,
40770332-40770457
Length = 504
Score = 49.6 bits (113), Expect = 7e-07
Identities = 28/98 (28%), Positives = 51/98 (52%), Gaps = 10/98 (10%)
Frame = +1
Query: 1 ISDALNHASIIDGIRLCKAQKYRYPHRDLTELEHLL----------AHSDARIKLIVTDG 150
ISD+LNH SI++G R A + H + LE +L H + +++ +G
Sbjct: 204 ISDSLNHNSIVNGARGSGATVRVFQHNNPAHLEEVLREQIAGGQPRTHRPWKKIIVIVEG 263
Query: 151 VFSMDGTVAPIKGLRDLADKYRALLVVDDSHATGFSGK 264
++SM+G + + + + KY+A +D++H+ G GK
Sbjct: 264 IYSMEGELCKLPEVIAVCKKYKAYTYLDEAHSIGAVGK 301
>11_04_0455 +
17903921-17904046,17904149-17904214,17905028-17905116,
17905513-17905658,17905743-17905867,17905964-17906057,
17906144-17906307,17906449-17906610,17906683-17906809,
17906854-17906862,17906912-17907078,17907113-17907307,
17907398-17907490
Length = 520
Score = 48.0 bits (109), Expect = 2e-06
Identities = 27/98 (27%), Positives = 50/98 (51%), Gaps = 10/98 (10%)
Frame = +1
Query: 1 ISDALNHASIIDGIRLCKAQKYRYPHRDLTELEHLL----------AHSDARIKLIVTDG 150
ISD+LNH SI++G R A + H LE +L H + +++ +G
Sbjct: 189 ISDSLNHNSIVNGARGSGATVRVFQHNSPAHLEEVLREQIAGGQPRTHRPWKKIIVIVEG 248
Query: 151 VFSMDGTVAPIKGLRDLADKYRALLVVDDSHATGFSGK 264
++SM+G + + + + KY+A +D++H+ G G+
Sbjct: 249 IYSMEGELCKLPEIIAVCKKYKAYTYLDEAHSIGAVGQ 286
>10_02_0148 -
5859664-5859828,5859916-5860043,5860310-5860451,
5860548-5860643,5860836-5860976,5861799-5861973,
5862416-5862702,5862777-5862870,5863244-5863335,
5863459-5863553,5863648-5863759
Length = 508
Score = 47.6 bits (108), Expect = 3e-06
Identities = 24/100 (24%), Positives = 52/100 (52%), Gaps = 7/100 (7%)
Frame = +1
Query: 1 ISDALNHASIIDGIRLCKAQKYRYPHRDLTELEHLLA-------HSDARIKLIVTDGVFS 159
++D H ++ +G++L ++ + H D+ L +L H++ + IV + ++
Sbjct: 226 VADEGVHWAVQNGLQLSRSTVVYFKHNDMASLASILEKLTHGNKHTEKIRRYIVVEAIYQ 285
Query: 160 MDGTVAPIKGLRDLADKYRALLVVDDSHATGFSGKLAEAL 279
G +AP+ + L +KYR +++++SH+ G GK L
Sbjct: 286 NSGQIAPLDEIVRLKEKYRFRVILEESHSFGVLGKSGRGL 325
>02_05_1150 +
34481965-34482076,34482174-34482268,34482380-34482471,
34482878-34482971,34483191-34483354,34483755-34483929,
34484017-34484157,34484357-34484452,34484549-34484690,
34484953-34485080,34485179-34485343
Length = 467
Score = 46.4 bits (105), Expect = 6e-06
Identities = 25/100 (25%), Positives = 51/100 (51%), Gaps = 7/100 (7%)
Frame = +1
Query: 1 ISDALNHASIIDGIRLCKAQKYRYPHRDLTELEHLL---AHSDARI----KLIVTDGVFS 159
++D H ++ +G++L ++ + H D+ L L H + R + IV + ++
Sbjct: 185 VADEGVHWAVQNGLQLSRSTVVYFKHNDMASLASTLEKLTHGNKRTEKIRRYIVVEAIYQ 244
Query: 160 MDGTVAPIKGLRDLADKYRALLVVDDSHATGFSGKLAEAL 279
G +AP+ + L +KYR +++++SH+ G GK L
Sbjct: 245 NSGQIAPLDEIVRLKEKYRFRVILEESHSFGVLGKSGRGL 284
>03_02_0387 -
8016399-8016575,8016661-8016788,8017073-8017214,
8017301-8017396,8017572-8017712,8017857-8018031,
8018443-8018575,8018661-8018733,8018807-8018900,
8019890-8019981,8020091-8020185,8020267-8020378
Length = 485
Score = 41.9 bits (94), Expect = 1e-04
Identities = 22/100 (22%), Positives = 50/100 (50%), Gaps = 7/100 (7%)
Frame = +1
Query: 1 ISDALNHASIIDGIRLCKAQKYRYPHRDLTELEHLLA-------HSDARIKLIVTDGVFS 159
++D H ++ +G+ L ++ + H D+ L + L ++ + IV + ++
Sbjct: 199 VADEGVHWAVQNGLHLSRSTVVYFKHNDMASLANTLEKLTRGNKRAEKIRRYIVVESIYQ 258
Query: 160 MDGTVAPIKGLRDLADKYRALLVVDDSHATGFSGKLAEAL 279
G +AP+ + L +KYR +++++SH+ G G+ L
Sbjct: 259 NSGQIAPLDEIVRLKEKYRFRVILEESHSFGVLGQSGRGL 298
>08_02_0707 - 20212190-20214592
Length = 800
Score = 27.9 bits (59), Expect = 2.4
Identities = 20/57 (35%), Positives = 28/57 (49%)
Frame = -1
Query: 311 IRRPHNTAILFSASASFPEKPVAWLSSTTNKALYLSARSLRPFIGATVPSIENTPSV 141
+RRP ++ A ASF A SS+++ +L L PF V S + TPSV
Sbjct: 151 LRRPSRRRVVSVAVASFALFFFASPSSSSSSTSHLLV--LLPFASGLVSSADQTPSV 205
>03_05_1017 + 29730531-29730738,29730839-29730885,29731415-29731549
Length = 129
Score = 27.9 bits (59), Expect = 2.4
Identities = 26/90 (28%), Positives = 38/90 (42%), Gaps = 3/90 (3%)
Frame = -1
Query: 329 QGR-TDDIRRPHNTAILFSASASFPEKPVAWLSSTTNKALYLSARSLRPFIGAT--VPSI 159
QG+ D IRRP A F SA+ +P+A L+ +S R L F+ +T +P
Sbjct: 5 QGKLVDTIRRPFTAASTFHRSATRHLQPLAMLAQRNG----ISRRGLLTFLTSTAAIPEA 60
Query: 158 ENTPSVTISLILASLCANKCSNSVKSL*GY 69
+ + L NK N + L Y
Sbjct: 61 GESRKALLQEYLKKSKENKEKNDKERLDDY 90
>11_05_0032 - 18496314-18496920,18496949-18497121
Length = 259
Score = 27.1 bits (57), Expect = 4.2
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = +1
Query: 193 RDLADKYRALLVVDDSHATGFSGKLAEALKSIAV 294
R+ A+K R LLVVDD G + +A L I V
Sbjct: 20 RNRAEKLRELLVVDDEPEEGITRDVARNLLRILV 53
>11_04_0205 +
14860857-14861534,14862585-14862975,14863069-14863170,
14863438-14863682
Length = 471
Score = 26.6 bits (56), Expect = 5.6
Identities = 19/46 (41%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = +1
Query: 118 DARIKLIVTDG-VFSMDGTVAPIKGLRDLADKYRALLVVDDSHATG 252
D R KLI+ G + D A LR +ADK ALL+ D +H +G
Sbjct: 179 DFRPKLIICGGSAYPRDWDYAK---LRAVADKVGALLLCDMAHISG 221
>10_08_0532 +
18580579-18580746,18581923-18581997,18582659-18583887,
18584853-18585013,18585272-18585279,18587737-18588768
Length = 890
Score = 26.6 bits (56), Expect = 5.6
Identities = 16/65 (24%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
Frame = +1
Query: 112 HSDARIKLIVTD-GVFSMDGTVAPIKGLRDLADKYRALLVVDDSHATGFSGKLAEALKSI 288
H +K ++++ G+ + + +K L A + D+ GFS K+ ALK
Sbjct: 373 HKSGELKKVLSEKGIVAKESLEDRLKALISSAPVMLFMKGTPDAPRCGFSSKVVNALKQA 432
Query: 289 AVLWG 303
V +G
Sbjct: 433 GVSFG 437
>09_05_0016 +
20089545-20089748,20090072-20090263,20090644-20090814,
20090915-20091096,20091189-20091435,20091776-20091908,
20092070-20092599,20092940-20093170
Length = 629
Score = 26.6 bits (56), Expect = 5.6
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = -1
Query: 215 LYLSARSLRPFIGATVPSIENTPS 144
LY + + PFIG + P+I++ PS
Sbjct: 251 LYEIGKGVYPFIGVSAPNIDDLPS 274
>08_01_1050 - 10649434-10651917
Length = 827
Score = 26.6 bits (56), Expect = 5.6
Identities = 16/29 (55%), Positives = 18/29 (62%)
Frame = +1
Query: 211 YRALLVVDDSHATGFSGKLAEALKSIAVL 297
+ AL V+D SH FSG L AL SIA L
Sbjct: 130 FAALQVLDVSH-NAFSGALPPALGSIAAL 157
>08_01_0465 + 4099721-4100556,4101505-4103614
Length = 981
Score = 26.6 bits (56), Expect = 5.6
Identities = 8/19 (42%), Positives = 16/19 (84%)
Frame = +1
Query: 181 IKGLRDLADKYRALLVVDD 237
I G++DL +K R+++++DD
Sbjct: 268 INGIKDLVEKKRSIVIIDD 286
>06_01_0276 + 2035763-2036770
Length = 335
Score = 26.6 bits (56), Expect = 5.6
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +1
Query: 4 SDALNHASIIDGIRLCKAQKYRY 72
S LNHA IDG+ C Y+Y
Sbjct: 313 SGVLNHAGAIDGLVKCSNLYYKY 335
>01_06_0402 - 29044205-29044540,29044626-29044898,29044982-29045416
Length = 347
Score = 26.6 bits (56), Expect = 5.6
Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = -1
Query: 326 GRTDDIRRPHNTAILFSASASFPEKPVAWLSS-TTNKALYLSARSLRPFIG 177
G D++ RP N ++ +S S PVA+L + +L+L +R+ F G
Sbjct: 149 GLLDEMNRPINKGKMYISSTSPLAVPVAYLRQFQRDFSLFLKSRAAEVFSG 199
>06_03_0930 -
26038341-26038508,26039114-26039254,26040799-26040858,
26040972-26041034,26041444-26041454,26041722-26041802,
26042783-26043020,26043563-26043997
Length = 398
Score = 26.2 bits (55), Expect = 7.4
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +3
Query: 288 CGVMGAADIICSTLGKAVSG 347
C V AADIICS G ++G
Sbjct: 9 CAVAAAADIICSLRGADLAG 28
>03_02_0199 - 6347980-6348225,6348300-6348341,6348824-6348978,
6349369-6349475,6349608-6349733,6349809-6349890,
6350057-6350130,6351184-6352631,6353391-6353540,
6353664-6353906,6354009-6354266,6355554-6356015
Length = 1130
Score = 26.2 bits (55), Expect = 7.4
Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Frame = -1
Query: 296 NTAILFSASASFPEKPVAWLSSTTNKALYLSARSLRPFIGATVPSIENT--PSVTISLIL 123
NT LF S + + WL + +N S+ SL+ + + +EN PS+ + + L
Sbjct: 912 NTTHLFLTRTSKEAEDILWLLTASNFPQLTSSISLQSWEKVQLKLLENCIHPSLEMGIFL 971
Query: 122 ASL 114
SL
Sbjct: 972 YSL 974
>04_04_1034 +
30275708-30276022,30276354-30276440,30276833-30276874,
30276983-30277027,30278826-30278891,30278956-30279012,
30279286-30279435,30279849-30279926,30280053-30280159,
30280261-30280291
Length = 325
Score = 25.8 bits (54), Expect = 9.8
Identities = 11/37 (29%), Positives = 18/37 (48%)
Frame = -1
Query: 263 FPEKPVAWLSSTTNKALYLSARSLRPFIGATVPSIEN 153
FP+ PV ++ +N RS RPF+ ++ N
Sbjct: 145 FPQSPVGFIREKSNVIFRQLFRSRRPFVAEITDAMGN 181
>03_04_0024 + 16556026-16556588,16556757-16556868
Length = 224
Score = 25.8 bits (54), Expect = 9.8
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +2
Query: 248 PAFRGNWLRH*RVLRCYGGGG 310
P +R +WLR RV C GGGG
Sbjct: 86 PPWRPSWLRQARV--CRGGGG 104
>02_02_0207 -
7845072-7845102,7845235-7845341,7845444-7845521,
7845966-7846169,7846389-7846445,7846513-7846578,
7847976-7848020,7848129-7848170,7848563-7848649,
7848830-7848919,7849226-7849431,7849565-7849604
Length = 350
Score = 25.8 bits (54), Expect = 9.8
Identities = 11/37 (29%), Positives = 18/37 (48%)
Frame = -1
Query: 263 FPEKPVAWLSSTTNKALYLSARSLRPFIGATVPSIEN 153
FP+ PV ++ +N RS RPF+ ++ N
Sbjct: 152 FPQSPVGFIREKSNVIFRQLFRSRRPFVAEITDAMGN 188
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,120,059
Number of Sequences: 37544
Number of extensions: 183402
Number of successful extensions: 542
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 528
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 536
length of database: 14,793,348
effective HSP length: 73
effective length of database: 12,052,636
effective search space used: 530315984
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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