Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10880X
(353 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_29250| Best HMM Match : Aminotran_1_2 (HMM E-Value=7.4e-07) 95 1e-20
SB_11194| Best HMM Match : No HMM Matches (HMM E-Value=.) 75 2e-14
SB_33262| Best HMM Match : DOMON (HMM E-Value=2.7e-28) 59 1e-09
SB_33803| Best HMM Match : Aminotran_1_2 (HMM E-Value=2.6e-26) 56 6e-09
SB_13925| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.002
SB_5727| Best HMM Match : Peptidase_M1 (HMM E-Value=0) 30 0.62
SB_1749| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.4
SB_48454| Best HMM Match : VWA (HMM E-Value=1.10002e-42) 28 1.9
SB_36777| Best HMM Match : VWA (HMM E-Value=0) 28 1.9
SB_49128| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.5
SB_28852| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.5
SB_6059| Best HMM Match : 7tm_2 (HMM E-Value=6.5e-09) 28 2.5
SB_56441| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.5
SB_474| Best HMM Match : dsrm (HMM E-Value=3.2e-20) 27 3.3
SB_10731| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 3.3
SB_45114| Best HMM Match : RasGEF (HMM E-Value=3.7e-24) 27 4.4
SB_59345| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 7.7
SB_52576| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 7.7
SB_21356| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 7.7
SB_9872| Best HMM Match : ResIII (HMM E-Value=0.36) 26 7.7
SB_3986| Best HMM Match : C2 (HMM E-Value=2.9e-31) 26 7.7
SB_2770| Best HMM Match : ResIII (HMM E-Value=2.2) 26 7.7
>SB_29250| Best HMM Match : Aminotran_1_2 (HMM E-Value=7.4e-07)
Length = 252
Score = 95.5 bits (227), Expect = 1e-20
Identities = 54/108 (50%), Positives = 70/108 (64%), Gaps = 22/108 (20%)
Frame = +1
Query: 4 SDALNHASIIDGIRLCKAQKYRYPHRDLT---------------------ELEHLLAHSD 120
SD LNHAS+IDGIRLC+A+K++Y H D+ +LE L +D
Sbjct: 75 SDELNHASMIDGIRLCRAKKFKYKHIDVQGVAVNLSLETLADVQLICFYLDLEEKLKEAD 134
Query: 121 -ARIKLIVTDGVFSMDGTVAPIKGLRDLADKYRALLVVDDSHATGFSG 261
ARIKLI +DGVFSMDG++AP+ + DLADKY AL+ +D+ HATGF G
Sbjct: 135 GARIKLIASDGVFSMDGSMAPLPEICDLADKYGALVFIDECHATGFLG 182
Score = 32.3 bits (70), Expect = 0.12
Identities = 15/23 (65%), Positives = 16/23 (69%)
Frame = +3
Query: 285 YCGVMGAADIICSTLGKAVSGAA 353
Y G G DII STLGKA+ GAA
Sbjct: 191 YTGTRGRVDIINSTLGKALGGAA 213
>SB_11194| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 613
Score = 74.5 bits (175), Expect = 2e-14
Identities = 42/87 (48%), Positives = 54/87 (62%), Gaps = 1/87 (1%)
Frame = +1
Query: 4 SDALNHASIIDGIRLCKAQKYRYPHRDLTELEHLLAHSD-ARIKLIVTDGVFSMDGTVAP 180
SDA NHAS+I GIR A+K+ + H D L LLA +D A K++ + V SM G ++P
Sbjct: 314 SDAGNHASMIQGIRNSGAKKFIFRHNDPEHLGKLLAAADPAAPKIVAFETVHSMTGDISP 373
Query: 181 IKGLRDLADKYRALLVVDDSHATGFSG 261
IK L D+A KY AL VD+ HA G G
Sbjct: 374 IKQLCDVAHKYGALTFVDEVHAVGLYG 400
>SB_33262| Best HMM Match : DOMON (HMM E-Value=2.7e-28)
Length = 595
Score = 58.8 bits (136), Expect = 1e-09
Identities = 34/97 (35%), Positives = 54/97 (55%), Gaps = 10/97 (10%)
Frame = +1
Query: 1 ISDALNHASIIDGIRLCKAQKYRYPHRDLTELEHLL----------AHSDARIKLIVTDG 150
ISD LNH+S++ G RL A + H D+ LE++L H R LI+ +G
Sbjct: 47 ISDELNHSSLVLGARLSGATIKVFKHNDIKSLENMLRTSVVQGQPRTHRPWRKILIIVEG 106
Query: 151 VFSMDGTVAPIKGLRDLADKYRALLVVDDSHATGFSG 261
V+SM+G++ + + L KY+A L +D++H+ G G
Sbjct: 107 VYSMEGSLVRLPEIVALKKKYKAYLYLDEAHSIGAVG 143
>SB_33803| Best HMM Match : Aminotran_1_2 (HMM E-Value=2.6e-26)
Length = 391
Score = 56.4 bits (130), Expect = 6e-09
Identities = 33/97 (34%), Positives = 53/97 (54%), Gaps = 10/97 (10%)
Frame = +1
Query: 1 ISDALNHASIIDGIRLCKAQKYRYPHRDLTELEHLL----------AHSDARIKLIVTDG 150
ISD LNH+S++ G RL A + H D+ LE+ L H R LI+ +G
Sbjct: 190 ISDELNHSSLVLGARLSGATIKVFKHNDIKSLENKLRTSVVQGQPRTHRPWRKILIIVEG 249
Query: 151 VFSMDGTVAPIKGLRDLADKYRALLVVDDSHATGFSG 261
V+SM+G++ + + + KY+A L +D++H+ G G
Sbjct: 250 VYSMEGSLVRLPEIVAIKKKYKAYLYLDEAHSIGAVG 286
>SB_13925| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 317
Score = 37.9 bits (84), Expect = 0.002
Identities = 26/88 (29%), Positives = 43/88 (48%), Gaps = 7/88 (7%)
Frame = +1
Query: 73 PHRDLTELEHLLAHSDARIKLIVTDGVFSMDGTVAP----IKGLRDLADKYRALLVVDDS 240
P+ DL LE + SD + + + G V P +KG+RDL DKY L + D+
Sbjct: 139 PYNDLAALEKSI--SDPNTAAFMVEPIQGEAGVVVPDAGYLKGVRDLCDKYNVLFIADE- 195
Query: 241 HATGFSGK---LAEALKSIAVLWGRRIS 315
H + + G A++++ VL ++S
Sbjct: 196 HGSTYGGNPLGAKVAMEALRVLEEEKLS 223
>SB_5727| Best HMM Match : Peptidase_M1 (HMM E-Value=0)
Length = 904
Score = 29.9 bits (64), Expect = 0.62
Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Frame = +1
Query: 70 YPHRDLTELEHLLAHSDARIKLIVTDGVFSMDGTVA--PIK 186
Y R + H LAH D + + +D FS+DG V+ PIK
Sbjct: 526 YKQRVAAVIAHELAHQDDQFVITDSDTAFSLDGLVSSHPIK 566
>SB_1749| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 526
Score = 28.7 bits (61), Expect = 1.4
Identities = 27/88 (30%), Positives = 35/88 (39%), Gaps = 3/88 (3%)
Frame = +1
Query: 82 DLTELEHLLAHSDARIKLIVTDGVFS--MDGTVAPIKGLRDLADKYRALLVVDDSHATGF 255
DL E+ + I+ DG S + G VA + G R K+R + D H
Sbjct: 381 DLAEMSEKGQRKQNGLNAILMDGRKSPTVTGKVATVNGKRIALFKHRGQVYAMDEHCPHM 440
Query: 256 SGKLAEALKSIAVLW-GRRISSVRPWAK 336
G L L I L RR+ V PW K
Sbjct: 441 GGPL--HLGDIEELGEARRLCIVCPWHK 466
>SB_48454| Best HMM Match : VWA (HMM E-Value=1.10002e-42)
Length = 205
Score = 28.3 bits (60), Expect = 1.9
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +1
Query: 124 RIKLIVTDGVFSMDGTVAPIKGLRDLADKYRAL 222
RI +++TDG+ S D P K LRD+ + AL
Sbjct: 122 RILIVMTDGI-SSDDVAGPAKALRDMGVEIFAL 153
>SB_36777| Best HMM Match : VWA (HMM E-Value=0)
Length = 1303
Score = 28.3 bits (60), Expect = 1.9
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +1
Query: 124 RIKLIVTDGVFSMDGTVAPIKGLRDLADKYRAL 222
RI +++TDG+ S D P K LRD+ + AL
Sbjct: 307 RILIVMTDGI-SSDDVAGPAKALRDMGVEIFAL 338
Score = 28.3 bits (60), Expect = 1.9
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +1
Query: 124 RIKLIVTDGVFSMDGTVAPIKGLRDLADKYRAL 222
RI +++TDG+ S D P K LRD+ + AL
Sbjct: 504 RILIVMTDGI-SSDDVAGPAKALRDMGVEIFAL 535
Score = 28.3 bits (60), Expect = 1.9
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +1
Query: 124 RIKLIVTDGVFSMDGTVAPIKGLRDLADKYRAL 222
RI +++TDG+ S D P K LRD+ + AL
Sbjct: 701 RILIVMTDGI-SSDDVAGPAKALRDMGVEIFAL 732
>SB_49128| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 464
Score = 27.9 bits (59), Expect = 2.5
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +1
Query: 85 LTELEHLLAHSDARIKLIVTDGVFSMDGTVAPIKGLRDLAD 207
L + +L + A+ + TD + +DGT P K +LAD
Sbjct: 279 LNNPKDMLVDTGAKSHFVTTDTITRIDGTFKPSKHCMELAD 319
>SB_28852| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3172
Score = 27.9 bits (59), Expect = 2.5
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = +1
Query: 127 IKLIVTDGVFSMDGTVAPIKGLRDLADKYRALLVVDDSHATG 252
IK+ + D + S + P+K L + + +VD +HA G
Sbjct: 181 IKIAIIDHITSSSALLLPVKKLLKACHDHGVMALVDGAHAPG 222
>SB_6059| Best HMM Match : 7tm_2 (HMM E-Value=6.5e-09)
Length = 1069
Score = 27.9 bits (59), Expect = 2.5
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = -1
Query: 155 NTPSVTISLILASLCANKCSNSVKSL*GYRYFCALHS 45
N PS + SL L C +C + Y +FC L++
Sbjct: 283 NPPSFSFSLDLLCYCDGECEKFLDCCADYEHFCKLNT 319
>SB_56441| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1717
Score = 27.9 bits (59), Expect = 2.5
Identities = 16/60 (26%), Positives = 27/60 (45%)
Frame = -1
Query: 257 EKPVAWLSSTTNKALYLSARSLRPFIGATVPSIENTPSVTISLILASLCANKCSNSVKSL 78
+ P W ++T KALY+ AT+P + + V I L A+ +S++ L
Sbjct: 524 DNPSFWALNSTEKALYMERAGTATLGSATIPWMPSDQDVQICLNFDYKLASDDHSSIEVL 583
>SB_474| Best HMM Match : dsrm (HMM E-Value=3.2e-20)
Length = 918
Score = 27.5 bits (58), Expect = 3.3
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = +3
Query: 9 RFEPRVHNRRDQAMQGAEIPIPSQRFDRIGA 101
RF+P +R A QG +P+P +R +++ A
Sbjct: 847 RFDPDPRSRIVIAKQGRPVPVPGKRGEKVDA 877
>SB_10731| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 215
Score = 27.5 bits (58), Expect = 3.3
Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = -1
Query: 272 SASFPEKPVAW-LSSTTNKALYLSARSLRPFIGATV 168
+A FP W L T+ +ALY S ++ P + AT+
Sbjct: 39 NAMFPPSASNWTLKLTSKRALYQSRGAISPLLSATI 74
>SB_45114| Best HMM Match : RasGEF (HMM E-Value=3.7e-24)
Length = 315
Score = 27.1 bits (57), Expect = 4.4
Identities = 13/42 (30%), Positives = 26/42 (61%)
Frame = +3
Query: 33 RRDQAMQGAEIPIPSQRFDRIGALVSAQRCKNQAYSNRRSIL 158
++D+ ++ I SQRF+ ALV+++ K Q+ S R +++
Sbjct: 100 KQDKHIRAPNILRVSQRFNETSALVTSEILKRQSPSARATVI 141
>SB_59345| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1031
Score = 26.2 bits (55), Expect = 7.7
Identities = 13/49 (26%), Positives = 25/49 (51%)
Frame = +1
Query: 70 YPHRDLTELEHLLAHSDARIKLIVTDGVFSMDGTVAPIKGLRDLADKYR 216
+ ++ L + +L + A ++ TD + +DGT P + +LAD R
Sbjct: 282 HSNKVLNNPKGMLVDTGATSHIVTTDTITRIDGTFKPSEHCMELADGTR 330
>SB_52576| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1649
Score = 26.2 bits (55), Expect = 7.7
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = +1
Query: 202 ADKYRALLVVDDSHATGFSGKLAEALKSIAVLWGR 306
AD R + DD+H + K E ++S WGR
Sbjct: 1505 ADNERLIATFDDAHVITWDIKSREVIRSANGHWGR 1539
>SB_21356| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1003
Score = 26.2 bits (55), Expect = 7.7
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = +3
Query: 9 RFEPRVHNRRDQAMQGAEIPIPSQRFDRIGA 101
RF+P QG +P+P +R +++GA
Sbjct: 784 RFDPDPSVAHRYRKQGRPVPVPGKRGEKVGA 814
>SB_9872| Best HMM Match : ResIII (HMM E-Value=0.36)
Length = 624
Score = 26.2 bits (55), Expect = 7.7
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = +3
Query: 9 RFEPRVHNRRDQAMQGAEIPIPSQRFDRIGA 101
RF+P QG +P+P +R +++GA
Sbjct: 437 RFDPDPSVAHRYRKQGRPVPVPGKRGEKVGA 467
>SB_3986| Best HMM Match : C2 (HMM E-Value=2.9e-31)
Length = 778
Score = 26.2 bits (55), Expect = 7.7
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = -1
Query: 272 SASFPEKPVAWLSSTTNKALYLSARSLRPFIGATVPSIENTPSVTISL 129
SASFP + S T++ A + S S+ P IG + + V ++L
Sbjct: 579 SASFPRGAYSTTSLTSSTAGFSSELSVGPSIGPSTEELSTRGEVKLTL 626
>SB_2770| Best HMM Match : ResIII (HMM E-Value=2.2)
Length = 928
Score = 26.2 bits (55), Expect = 7.7
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = +3
Query: 9 RFEPRVHNRRDQAMQGAEIPIPSQRFDRIGA 101
RF+P QG +P+P +R +++GA
Sbjct: 799 RFDPDPSVAHRYRKQGRPVPVPGKRGEKVGA 829
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,284,966
Number of Sequences: 59808
Number of extensions: 211937
Number of successful extensions: 640
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 606
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 637
length of database: 16,821,457
effective HSP length: 73
effective length of database: 12,455,473
effective search space used: 548040812
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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