Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10880X
(353 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70311-1|CAA94376.2| 420|Caenorhabditis elegans Hypothetical pr... 115 8e-27
U50307-2|AAA92303.1| 558|Caenorhabditis elegans Serine palmitoy... 66 5e-12
U50307-1|AAK71365.1| 586|Caenorhabditis elegans Serine palmitoy... 66 5e-12
Z81127-5|CAB03390.2| 512|Caenorhabditis elegans Hypothetical pr... 56 9e-09
AL022288-9|CAK55188.1| 452|Caenorhabditis elegans Hypothetical ... 33 0.057
M98552-9|AAA28210.3| 569|Caenorhabditis elegans Hypothetical pr... 32 0.13
U41534-13|AAD31050.2| 422|Caenorhabditis elegans Hypothetical p... 30 0.40
U41534-12|AAM22027.1| 357|Caenorhabditis elegans Hypothetical p... 30 0.40
AF003136-4|AAK93853.2| 368|Caenorhabditis elegans Acyltransfera... 27 2.8
Z81477-2|CAB03928.1| 66|Caenorhabditis elegans Hypothetical pr... 27 5.0
Z81506-9|CAB04132.2| 164|Caenorhabditis elegans Hypothetical pr... 26 6.6
Z81478-5|CAB03936.2| 164|Caenorhabditis elegans Hypothetical pr... 26 6.6
AF016432-7|AAB65382.1| 342|Caenorhabditis elegans Seven tm rece... 26 6.6
AF016426-2|AAB65345.1| 335|Caenorhabditis elegans Hypothetical ... 26 6.6
U41031-1|AAA82618.2| 562|Caenorhabditis elegans Abnormal cell l... 26 8.7
AF133217-1|AAD24877.1| 583|Caenorhabditis elegans tyrosine kina... 26 8.7
AF026208-3|AAB71267.3| 903|Caenorhabditis elegans Hypothetical ... 26 8.7
>Z70311-1|CAA94376.2| 420|Caenorhabditis elegans Hypothetical
protein T25B9.1 protein.
Length = 420
Score = 115 bits (277), Expect = 8e-27
Identities = 57/89 (64%), Positives = 68/89 (76%), Gaps = 1/89 (1%)
Frame = +1
Query: 1 ISDALNHASIIDGIRLCKAQKYRYPHRDLTELEHLLAHS-DARIKLIVTDGVFSMDGTVA 177
ISD LNHASIIDGIRL KA++ RY H DL +LE L + D+R +LIVTDGVFSMDG VA
Sbjct: 155 ISDELNHASIIDGIRLSKAKRLRYKHLDLGDLESKLKEAEDSRFRLIVTDGVFSMDGDVA 214
Query: 178 PIKGLRDLADKYRALLVVDDSHATGFSGK 264
P+ + LA+KY ALL +D+ HATGF GK
Sbjct: 215 PLGDITSLAEKYNALLFIDECHATGFFGK 243
>U50307-2|AAA92303.1| 558|Caenorhabditis elegans Serine palmitoyl
transferase familyprotein 2, isoform a protein.
Length = 558
Score = 66.5 bits (155), Expect = 5e-12
Identities = 38/111 (34%), Positives = 58/111 (52%), Gaps = 10/111 (9%)
Frame = +1
Query: 1 ISDALNHASIIDGIRLCKAQKYRYPHRDLTELEHLL----------AHSDARIKLIVTDG 150
ISD NHAS+I G RL A + H D+ LE +L H + LI+ +G
Sbjct: 262 ISDKYNHASLILGCRLSGASTKVFEHNDMESLERILRDAIAYGNPKTHRPYKKILIIVEG 321
Query: 151 VFSMDGTVAPIKGLRDLADKYRALLVVDDSHATGFSGKLAEALKSIAVLWG 303
++SM+G++ + G+ L KY+A L +D++H+ G GK K + WG
Sbjct: 322 IYSMEGSICNLPGIIALKKKYQAYLYLDEAHSIGAMGKTG---KGVVEYWG 369
>U50307-1|AAK71365.1| 586|Caenorhabditis elegans Serine palmitoyl
transferase familyprotein 2, isoform b protein.
Length = 586
Score = 66.5 bits (155), Expect = 5e-12
Identities = 38/111 (34%), Positives = 58/111 (52%), Gaps = 10/111 (9%)
Frame = +1
Query: 1 ISDALNHASIIDGIRLCKAQKYRYPHRDLTELEHLL----------AHSDARIKLIVTDG 150
ISD NHAS+I G RL A + H D+ LE +L H + LI+ +G
Sbjct: 290 ISDKYNHASLILGCRLSGASTKVFEHNDMESLERILRDAIAYGNPKTHRPYKKILIIVEG 349
Query: 151 VFSMDGTVAPIKGLRDLADKYRALLVVDDSHATGFSGKLAEALKSIAVLWG 303
++SM+G++ + G+ L KY+A L +D++H+ G GK K + WG
Sbjct: 350 IYSMEGSICNLPGIIALKKKYQAYLYLDEAHSIGAMGKTG---KGVVEYWG 397
>Z81127-5|CAB03390.2| 512|Caenorhabditis elegans Hypothetical
protein T22G5.5 protein.
Length = 512
Score = 55.6 bits (128), Expect = 9e-09
Identities = 32/111 (28%), Positives = 54/111 (48%), Gaps = 10/111 (9%)
Frame = +1
Query: 1 ISDALNHASIIDGIRLCKAQKYRYPHRDLTELEHLLAHSDARIK----------LIVTDG 150
+SD LNHAS++ G RL A + H D ++ E L + + LI+ +G
Sbjct: 223 LSDRLNHASLVTGCRLSGAHTVVFRHNDASDCERKLRDALCGVSPKTGEKYNKVLIIIEG 282
Query: 151 VFSMDGTVAPIKGLRDLADKYRALLVVDDSHATGFSGKLAEALKSIAVLWG 303
++SM+GT+ + + KY L +D++H+ G G + +A WG
Sbjct: 283 IYSMEGTIVNLPAFIAVKKKYNCYLFLDEAHSIGAVGPSG---RGVAEYWG 330
>AL022288-9|CAK55188.1| 452|Caenorhabditis elegans Hypothetical
protein ZK1025.4b protein.
Length = 452
Score = 33.1 bits (72), Expect = 0.057
Identities = 16/60 (26%), Positives = 30/60 (50%)
Frame = -1
Query: 269 ASFPEKPVAWLSSTTNKALYLSARSLRPFIGATVPSIENTPSVTISLILASLCANKCSNS 90
A+ EKP + ++T ++ ++ GAT P TP +T++L +A N C ++
Sbjct: 366 ANVVEKPYRFFPNSTEGHIWNMHDTMHKIFGATPPIFSYTPILTMNLCIAKATPNVCHST 425
>M98552-9|AAA28210.3| 569|Caenorhabditis elegans Hypothetical
protein ZK370.8 protein.
Length = 569
Score = 31.9 bits (69), Expect = 0.13
Identities = 17/72 (23%), Positives = 30/72 (41%)
Frame = +1
Query: 28 IIDGIRLCKAQKYRYPHRDLTELEHLLAHSDARIKLIVTDGVFSMDGTVAPIKGLRDLAD 207
I+ ++LC ++ Y HR + E+E L L++ V+ M K L + A
Sbjct: 400 IVTFLKLCTSEDYADVHRRIREMEELAESRSTHFNLVLMSKVYMMTNNEESSKKLLEEAA 459
Query: 208 KYRALLVVDDSH 243
+ +V H
Sbjct: 460 RITTRYLVPSRH 471
>U41534-13|AAD31050.2| 422|Caenorhabditis elegans Hypothetical
protein C16A3.10a protein.
Length = 422
Score = 30.3 bits (65), Expect = 0.40
Identities = 20/70 (28%), Positives = 32/70 (45%), Gaps = 5/70 (7%)
Frame = +1
Query: 73 PHRDLTELEHLLAHSDARIKLIVTDGVFSMDGTVAP----IKGLRDLADKYRALLVVDD- 237
P+ +L +E + D + + + + G V P +KG+ DL KY L + D+
Sbjct: 189 PYNNLKAVEDAI--KDKNVAAFMVEPIQGEAGVVLPDPGYLKGVSDLCKKYNVLFITDEV 246
Query: 238 SHATGFSGKL 267
G SGKL
Sbjct: 247 QSGLGRSGKL 256
>U41534-12|AAM22027.1| 357|Caenorhabditis elegans Hypothetical
protein C16A3.10b protein.
Length = 357
Score = 30.3 bits (65), Expect = 0.40
Identities = 20/70 (28%), Positives = 32/70 (45%), Gaps = 5/70 (7%)
Frame = +1
Query: 73 PHRDLTELEHLLAHSDARIKLIVTDGVFSMDGTVAP----IKGLRDLADKYRALLVVDD- 237
P+ +L +E + D + + + + G V P +KG+ DL KY L + D+
Sbjct: 124 PYNNLKAVEDAI--KDKNVAAFMVEPIQGEAGVVLPDPGYLKGVSDLCKKYNVLFITDEV 181
Query: 238 SHATGFSGKL 267
G SGKL
Sbjct: 182 QSGLGRSGKL 191
>AF003136-4|AAK93853.2| 368|Caenorhabditis elegans
Acyltransferase-like protein 11 protein.
Length = 368
Score = 27.5 bits (58), Expect = 2.8
Identities = 16/51 (31%), Positives = 22/51 (43%)
Frame = -1
Query: 251 PVAWLSSTTNKALYLSARSLRPFIGATVPSIENTPSVTISLILASLCANKC 99
P +S T L+ SA L PF T+ I + L++A L KC
Sbjct: 317 PCVPISQTLPSTLFFSAALLAPFFSRTIGRIYLLTIASSPLLIAWLHIRKC 367
>Z81477-2|CAB03928.1| 66|Caenorhabditis elegans Hypothetical
protein C27C7.2 protein.
Length = 66
Score = 26.6 bits (56), Expect = 5.0
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = -1
Query: 197 SLRPFIGATVPSIENTPSVTISLILASLCANKCSNS 90
++ GAT P TP +T++L +A N C ++
Sbjct: 4 TMHKIFGATPPIFSYTPILTMNLCIAKATPNVCHST 39
>Z81506-9|CAB04132.2| 164|Caenorhabditis elegans Hypothetical
protein F16H6.2 protein.
Length = 164
Score = 26.2 bits (55), Expect = 6.6
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -2
Query: 91 RSNLCEGIGISAPCIA*SRLLWTRGS 14
R+ C G G++A C A + WT GS
Sbjct: 89 RTAACPGPGLTATCTALTSFEWTDGS 114
>Z81478-5|CAB03936.2| 164|Caenorhabditis elegans Hypothetical
protein F16H6.2 protein.
Length = 164
Score = 26.2 bits (55), Expect = 6.6
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -2
Query: 91 RSNLCEGIGISAPCIA*SRLLWTRGS 14
R+ C G G++A C A + WT GS
Sbjct: 89 RTAACPGPGLTATCTALTSFEWTDGS 114
>AF016432-7|AAB65382.1| 342|Caenorhabditis elegans Seven tm
receptor protein 226 protein.
Length = 342
Score = 26.2 bits (55), Expect = 6.6
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = -1
Query: 188 PFIGATVPSIENTPSVTISLILASLCANKCS 96
PFIG + S SVTI L+ LC K S
Sbjct: 203 PFIGLAIISGTIISSVTIVLVFGILCYQKIS 233
>AF016426-2|AAB65345.1| 335|Caenorhabditis elegans Hypothetical
protein W07B8.4 protein.
Length = 335
Score = 26.2 bits (55), Expect = 6.6
Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Frame = +1
Query: 13 LNHASIIDGIRLCKAQKYRYPH--RDLTELEHLLAHSDARIKLIVT 144
+NH I +L A+ Y P ++L ++EH+ AH D IKL T
Sbjct: 26 INH--INSAQKLWTAEHYTTPFEVKNLMKVEHVAAHLDKDIKLAET 69
>U41031-1|AAA82618.2| 562|Caenorhabditis elegans Abnormal cell
lineage protein 18 protein.
Length = 562
Score = 25.8 bits (54), Expect = 8.7
Identities = 11/35 (31%), Positives = 18/35 (51%)
Frame = +1
Query: 61 KYRYPHRDLTELEHLLAHSDARIKLIVTDGVFSMD 165
KYR H D+ L+A + R+++ + D S D
Sbjct: 410 KYRIVHNDIAARNCLIAEVNGRLQVQLCDSALSRD 444
>AF133217-1|AAD24877.1| 583|Caenorhabditis elegans tyrosine kinase
receptor-relatedprotein precursor RYK protein.
Length = 583
Score = 25.8 bits (54), Expect = 8.7
Identities = 11/35 (31%), Positives = 18/35 (51%)
Frame = +1
Query: 61 KYRYPHRDLTELEHLLAHSDARIKLIVTDGVFSMD 165
KYR H D+ L+A + R+++ + D S D
Sbjct: 431 KYRIVHNDIAARNCLIAEVNGRLQVQLCDSALSRD 465
>AF026208-3|AAB71267.3| 903|Caenorhabditis elegans Hypothetical
protein F52D1.1 protein.
Length = 903
Score = 25.8 bits (54), Expect = 8.7
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +1
Query: 154 FSMDGTVAPIKGLRDLADKYRALLVVDDSH 243
F D P ++DLADK R L+ + D H
Sbjct: 393 FDKDAFGKPEDMIKDLADKNRKLVTIVDPH 422
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,101,167
Number of Sequences: 27780
Number of extensions: 145417
Number of successful extensions: 403
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 396
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 399
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 471339352
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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