Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10879X
(433 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_2674| Best HMM Match : Tubulin (HMM E-Value=0) 183 6e-47
SB_2003| Best HMM Match : Tubulin (HMM E-Value=0) 183 6e-47
SB_34400| Best HMM Match : Tubulin (HMM E-Value=0) 182 8e-47
SB_19437| Best HMM Match : Tubulin (HMM E-Value=0) 182 8e-47
SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.) 181 3e-46
SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.) 180 3e-46
SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.) 179 8e-46
SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.) 162 1e-40
SB_48961| Best HMM Match : Tubulin (HMM E-Value=0) 139 1e-33
SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.) 110 4e-25
SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.) 98 2e-21
SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.) 95 2e-20
SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0) 95 2e-20
SB_5512| Best HMM Match : Tubulin (HMM E-Value=0) 91 3e-19
SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.) 81 4e-16
SB_17881| Best HMM Match : Tubulin (HMM E-Value=0) 79 2e-15
SB_47198| Best HMM Match : Tubulin (HMM E-Value=0) 78 3e-15
SB_17879| Best HMM Match : Tubulin (HMM E-Value=0) 77 6e-15
SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24) 76 1e-14
SB_59740| Best HMM Match : Tubulin (HMM E-Value=2.1e-25) 71 5e-13
SB_39308| Best HMM Match : Tubulin (HMM E-Value=0) 70 7e-13
SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.) 69 1e-12
SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27) 60 6e-10
SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.) 55 2e-08
SB_25311| Best HMM Match : Tubulin (HMM E-Value=0) 36 0.014
SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32) 34 0.043
SB_1004| Best HMM Match : CPSase_sm_chain (HMM E-Value=0) 29 1.6
SB_39846| Best HMM Match : SIR2 (HMM E-Value=1.4013e-45) 28 2.8
SB_5299| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.8
SB_15838| Best HMM Match : Peptidase_A17 (HMM E-Value=7.9e-32) 28 3.8
SB_13469| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.8
SB_53740| Best HMM Match : Thyroglobulin_1 (HMM E-Value=0) 27 6.6
SB_21099| Best HMM Match : Thyroglobulin_1 (HMM E-Value=1e-25) 27 6.6
SB_18951| Best HMM Match : EGF (HMM E-Value=2.1e-06) 27 6.6
SB_57099| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.6
SB_54574| Best HMM Match : WD40 (HMM E-Value=0) 27 8.7
>SB_2674| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 1036
Score = 183 bits (445), Expect = 6e-47
Identities = 82/85 (96%), Positives = 85/85 (100%)
Frame = +3
Query: 3 GIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFH 182
GIQPDGQMP+DKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFH
Sbjct: 93 GIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFH 152
Query: 183 PQQLITGKEDAANNYARGHYTIGKK 257
P+QLITGKEDAANNYARGHYTIGK+
Sbjct: 153 PEQLITGKEDAANNYARGHYTIGKE 177
Score = 182 bits (444), Expect = 8e-47
Identities = 81/85 (95%), Positives = 85/85 (100%)
Frame = +3
Query: 3 GIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFH 182
GIQPDGQMP+DKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFH
Sbjct: 614 GIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFH 673
Query: 183 PQQLITGKEDAANNYARGHYTIGKK 257
P+QLITGKEDAANNYARGHYT+GK+
Sbjct: 674 PEQLITGKEDAANNYARGHYTVGKE 698
Score = 101 bits (243), Expect = 2e-22
Identities = 45/46 (97%), Positives = 46/46 (100%)
Frame = +3
Query: 3 GIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTV 140
GIQPDGQMP+DKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTV
Sbjct: 541 GIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTV 586
Score = 96.7 bits (230), Expect = 7e-21
Identities = 48/61 (78%), Positives = 48/61 (78%)
Frame = +2
Query: 251 KEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFVI 430
KEIVDLVLDRIRKLADQCTGLQGFLIFH LLMERLSVDYGKKSKLEF I
Sbjct: 176 KEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAI 235
Query: 431 Y 433
Y
Sbjct: 236 Y 236
Score = 95.5 bits (227), Expect = 2e-20
Identities = 46/61 (75%), Positives = 48/61 (78%)
Frame = +2
Query: 251 KEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFVI 430
KE++DLVLDRIRKLADQCTGLQGFLIFH LLMERLSVDYGKKSKLEF I
Sbjct: 697 KELIDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAI 756
Query: 431 Y 433
Y
Sbjct: 757 Y 757
>SB_2003| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 451
Score = 183 bits (445), Expect = 6e-47
Identities = 82/85 (96%), Positives = 85/85 (100%)
Frame = +3
Query: 3 GIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFH 182
GIQPDGQMP+DKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFH
Sbjct: 29 GIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFH 88
Query: 183 PQQLITGKEDAANNYARGHYTIGKK 257
P+QLITGKEDAANNYARGHYTIGK+
Sbjct: 89 PEQLITGKEDAANNYARGHYTIGKE 113
Score = 94.3 bits (224), Expect = 4e-20
Identities = 46/61 (75%), Positives = 47/61 (77%)
Frame = +2
Query: 251 KEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFVI 430
KEI+DLVLDR RKLADQCTGLQGFLIFH LLMERLSVDYGKKSKLEF I
Sbjct: 112 KEIIDLVLDRCRKLADQCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAI 171
Query: 431 Y 433
Y
Sbjct: 172 Y 172
>SB_34400| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 380
Score = 182 bits (444), Expect = 8e-47
Identities = 81/85 (95%), Positives = 85/85 (100%)
Frame = +3
Query: 3 GIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFH 182
GIQPDGQMP+DKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFH
Sbjct: 28 GIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFH 87
Query: 183 PQQLITGKEDAANNYARGHYTIGKK 257
P+QLITGKEDAANNYARGHYT+GK+
Sbjct: 88 PEQLITGKEDAANNYARGHYTVGKE 112
Score = 96.3 bits (229), Expect = 9e-21
Identities = 47/61 (77%), Positives = 48/61 (78%)
Frame = +2
Query: 251 KEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFVI 430
KEI+DLVLDRIRKLADQCTGLQGFLIFH LLMERLSVDYGKKSKLEF I
Sbjct: 111 KEIIDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAI 170
Query: 431 Y 433
Y
Sbjct: 171 Y 171
>SB_19437| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 885
Score = 182 bits (444), Expect = 8e-47
Identities = 81/85 (95%), Positives = 85/85 (100%)
Frame = +3
Query: 3 GIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFH 182
GIQPDGQMP+DKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFH
Sbjct: 462 GIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFH 521
Query: 183 PQQLITGKEDAANNYARGHYTIGKK 257
P+QLITGKEDAANNYARGHYT+GK+
Sbjct: 522 PEQLITGKEDAANNYARGHYTVGKE 546
Score = 182 bits (443), Expect = 1e-46
Identities = 80/85 (94%), Positives = 85/85 (100%)
Frame = +3
Query: 3 GIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFH 182
GIQPDGQMP+DKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFH
Sbjct: 29 GIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFH 88
Query: 183 PQQLITGKEDAANNYARGHYTIGKK 257
P+QL+TGKEDAANNYARGHYT+GK+
Sbjct: 89 PEQLVTGKEDAANNYARGHYTVGKE 113
Score = 96.7 bits (230), Expect = 7e-21
Identities = 48/61 (78%), Positives = 48/61 (78%)
Frame = +2
Query: 251 KEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFVI 430
KEIVDLVLDRIRKLADQCTGLQGFLIFH LLMERLSVDYGKKSKLEF I
Sbjct: 112 KEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAI 171
Query: 431 Y 433
Y
Sbjct: 172 Y 172
Score = 96.7 bits (230), Expect = 7e-21
Identities = 48/61 (78%), Positives = 48/61 (78%)
Frame = +2
Query: 251 KEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFVI 430
KEIVDLVLDRIRKLADQCTGLQGFLIFH LLMERLSVDYGKKSKLEF I
Sbjct: 545 KEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAI 604
Query: 431 Y 433
Y
Sbjct: 605 Y 605
>SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1231
Score = 181 bits (440), Expect = 3e-46
Identities = 80/85 (94%), Positives = 84/85 (98%)
Frame = +3
Query: 3 GIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFH 182
GIQPDGQMP+DKTIGGGDDSFNTFFSETGAGKHVPRAVF DLEPTVVDEVRTGTYRQLFH
Sbjct: 833 GIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFADLEPTVVDEVRTGTYRQLFH 892
Query: 183 PQQLITGKEDAANNYARGHYTIGKK 257
P+QLITGKEDAANNYARGHYT+GK+
Sbjct: 893 PEQLITGKEDAANNYARGHYTVGKE 917
Score = 180 bits (437), Expect = 6e-46
Identities = 78/85 (91%), Positives = 85/85 (100%)
Frame = +3
Query: 3 GIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFH 182
GIQPDGQMP+DKTIGGGDD+FNTFF+ETGAGKHVPRAVFVDLEPTV+DEVRTGTYRQLFH
Sbjct: 400 GIQPDGQMPSDKTIGGGDDAFNTFFAETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFH 459
Query: 183 PQQLITGKEDAANNYARGHYTIGKK 257
P+QLITGKEDAANNYARGHYT+GK+
Sbjct: 460 PEQLITGKEDAANNYARGHYTVGKE 484
Score = 95.1 bits (226), Expect = 2e-20
Identities = 46/61 (75%), Positives = 48/61 (78%)
Frame = +2
Query: 251 KEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFVI 430
KE++DLVLDRIRKLADQCTGLQGFLIFH LLMERLSVDYGKKSKLEF I
Sbjct: 916 KEMIDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAI 975
Query: 431 Y 433
Y
Sbjct: 976 Y 976
Score = 89.0 bits (211), Expect = 1e-18
Identities = 43/61 (70%), Positives = 46/61 (75%)
Frame = +2
Query: 251 KEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFVI 430
KE +D+VLDR+RKLAD CTGLQGFLIFH LLMERLSVDYGKKSKLEF I
Sbjct: 483 KEQIDIVLDRLRKLADGCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAI 542
Query: 431 Y 433
Y
Sbjct: 543 Y 543
>SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 180 bits (439), Expect = 3e-46
Identities = 80/85 (94%), Positives = 84/85 (98%)
Frame = +3
Query: 3 GIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFH 182
GIQPDGQMP+DKTIGGGDDSFNTFFSETGAGKHVPRAVF DLEPTVVDEVRTGTYRQLFH
Sbjct: 14 GIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFCDLEPTVVDEVRTGTYRQLFH 73
Query: 183 PQQLITGKEDAANNYARGHYTIGKK 257
P+QLITGKEDAANNYARGHYT+GK+
Sbjct: 74 PEQLITGKEDAANNYARGHYTVGKQ 98
Score = 180 bits (437), Expect = 6e-46
Identities = 78/84 (92%), Positives = 84/84 (100%)
Frame = +3
Query: 3 GIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFH 182
GIQPDGQMP+DKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEP+V+DE+RTGTYRQLFH
Sbjct: 447 GIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPSVIDEIRTGTYRQLFH 506
Query: 183 PQQLITGKEDAANNYARGHYTIGK 254
P+QLITGKEDAANNYARGHYT+GK
Sbjct: 507 PEQLITGKEDAANNYARGHYTVGK 530
Score = 91.1 bits (216), Expect = 4e-19
Identities = 42/61 (68%), Positives = 48/61 (78%)
Frame = +2
Query: 251 KEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFVI 430
K+++++VLDR+RKLADQCTGLQGFLIFH LLMERLSVDYGKKSKLEF I
Sbjct: 97 KQLIEIVLDRLRKLADQCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAI 156
Query: 431 Y 433
Y
Sbjct: 157 Y 157
Score = 86.2 bits (204), Expect = 1e-17
Identities = 41/61 (67%), Positives = 46/61 (75%)
Frame = +2
Query: 251 KEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFVI 430
K+ +D VLDRIRKLADQC+GLQGFL+FH LL+ERLSVDYGKKSKLEF I
Sbjct: 530 KDHIDNVLDRIRKLADQCSGLQGFLVFHSFGGGTGSGFSALLLERLSVDYGKKSKLEFAI 589
Query: 431 Y 433
Y
Sbjct: 590 Y 590
>SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 452
Score = 179 bits (436), Expect = 8e-46
Identities = 79/85 (92%), Positives = 84/85 (98%)
Frame = +3
Query: 3 GIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFH 182
GIQPDGQMP+DKTIGGGDDSFNTFFSETG+GKHVPRAVF DLEPTVVDEVRTGTYRQLFH
Sbjct: 29 GIQPDGQMPSDKTIGGGDDSFNTFFSETGSGKHVPRAVFCDLEPTVVDEVRTGTYRQLFH 88
Query: 183 PQQLITGKEDAANNYARGHYTIGKK 257
P+QLITGKEDAANNYARGHYT+GK+
Sbjct: 89 PEQLITGKEDAANNYARGHYTVGKE 113
Score = 89.4 bits (212), Expect = 1e-18
Identities = 43/61 (70%), Positives = 46/61 (75%)
Frame = +2
Query: 251 KEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFVI 430
KE++D VLDR+RKLAD CTGLQGFLIFH LLMERLSVDYGKKSKLEF I
Sbjct: 112 KEMIDTVLDRLRKLADGCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAI 171
Query: 431 Y 433
Y
Sbjct: 172 Y 172
>SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 417
Score = 162 bits (394), Expect = 1e-40
Identities = 69/78 (88%), Positives = 78/78 (100%)
Frame = +3
Query: 24 MPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPQQLITG 203
MP+DKTIGGGDDSFNTFF+ETGAGKHVPRAVFVDLEPTV+DE+RTGTYRQLFHP+QL++G
Sbjct: 1 MPSDKTIGGGDDSFNTFFAETGAGKHVPRAVFVDLEPTVIDEIRTGTYRQLFHPEQLLSG 60
Query: 204 KEDAANNYARGHYTIGKK 257
KEDAANNYARGHYT+GK+
Sbjct: 61 KEDAANNYARGHYTVGKE 78
Score = 91.5 bits (217), Expect = 3e-19
Identities = 44/61 (72%), Positives = 46/61 (75%)
Frame = +2
Query: 251 KEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFVI 430
KE +DL LDRIRKLADQCTGLQGFLIFH LLMERLSVDYGKKSKLEF +
Sbjct: 77 KEHIDLALDRIRKLADQCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAV 136
Query: 431 Y 433
Y
Sbjct: 137 Y 137
>SB_48961| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 536
Score = 139 bits (336), Expect = 1e-33
Identities = 68/85 (80%), Positives = 71/85 (83%)
Frame = +3
Query: 3 GIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFH 182
GIQPDGQMP+DKT GGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVV
Sbjct: 29 GIQPDGQMPSDKTQGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVV----------ALS 78
Query: 183 PQQLITGKEDAANNYARGHYTIGKK 257
P+QLITGKEDAANNYARGHYTIGK+
Sbjct: 79 PEQLITGKEDAANNYARGHYTIGKQ 103
Score = 85.8 bits (203), Expect = 1e-17
Identities = 41/61 (67%), Positives = 45/61 (73%)
Frame = +2
Query: 251 KEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFVI 430
K+ VD VLDR+RKLADQC+GLQGF IFH LLMERLSVDYGKKSKLEF +
Sbjct: 102 KQQVDQVLDRLRKLADQCSGLQGFFIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAV 161
Query: 431 Y 433
Y
Sbjct: 162 Y 162
>SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1383
Score = 110 bits (265), Expect = 4e-25
Identities = 48/60 (80%), Positives = 55/60 (91%)
Frame = +3
Query: 78 SETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPQQLITGKEDAANNYARGHYTIGKK 257
SE AGK+VPRAV VDLEPTV+DEVRTG YR L+HP+Q+I+GKEDAANNYARGHYTIGK+
Sbjct: 965 SEAAAGKYVPRAVLVDLEPTVIDEVRTGMYRYLYHPEQMISGKEDAANNYARGHYTIGKE 1024
Score = 81.0 bits (191), Expect = 4e-16
Identities = 36/61 (59%), Positives = 45/61 (73%)
Frame = +2
Query: 251 KEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFVI 430
KE+V++V+D+IRK+ DQC+GLQGFLIFH L+ E LSVDYGKKSKLEF +
Sbjct: 1023 KEMVEVVMDKIRKMTDQCSGLQGFLIFHSFGGGTGSGFASLITEHLSVDYGKKSKLEFAV 1082
Query: 431 Y 433
Y
Sbjct: 1083 Y 1083
>SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 98.3 bits (234), Expect = 2e-21
Identities = 43/51 (84%), Positives = 47/51 (92%)
Frame = +3
Query: 3 GIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVR 155
GIQPDGQMP+DKTI GGDDSFNTFFSETG GKHVPRAVFVDLEP+VV ++
Sbjct: 29 GIQPDGQMPSDKTIDGGDDSFNTFFSETGGGKHVPRAVFVDLEPSVVGRMK 79
>SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 95.5 bits (227), Expect = 2e-20
Identities = 46/61 (75%), Positives = 48/61 (78%)
Frame = +2
Query: 251 KEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFVI 430
KE++DLVLDRIRKLADQCTGLQGFLIFH LLMERLSVDYGKKSKLEF I
Sbjct: 49 KELIDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAI 108
Query: 431 Y 433
Y
Sbjct: 109 Y 109
Score = 83.8 bits (198), Expect = 5e-17
Identities = 35/40 (87%), Positives = 39/40 (97%)
Frame = +3
Query: 138 VVDEVRTGTYRQLFHPQQLITGKEDAANNYARGHYTIGKK 257
+ DEVRTGTYRQLFHP+QLITGKEDAANNYARGHYT+GK+
Sbjct: 11 LADEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKE 50
>SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 377
Score = 95.5 bits (227), Expect = 2e-20
Identities = 46/61 (75%), Positives = 48/61 (78%)
Frame = +2
Query: 251 KEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFVI 430
KE++DLVLDRIRKLADQCTGLQGFLIFH LLMERLSVDYGKKSKLEF I
Sbjct: 37 KELIDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAI 96
Query: 431 Y 433
Y
Sbjct: 97 Y 97
Score = 81.0 bits (191), Expect = 4e-16
Identities = 34/37 (91%), Positives = 37/37 (100%)
Frame = +3
Query: 147 EVRTGTYRQLFHPQQLITGKEDAANNYARGHYTIGKK 257
EVRTGTYRQLFHP+QLITGKEDAANNYARGHYT+GK+
Sbjct: 2 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKE 38
>SB_5512| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 365
Score = 91.5 bits (217), Expect = 3e-19
Identities = 44/61 (72%), Positives = 46/61 (75%)
Frame = +2
Query: 251 KEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFVI 430
KE +DL LDRIRKLADQCTGLQGFLIFH LLMERLSVDYGKKSKLEF +
Sbjct: 37 KEHIDLALDRIRKLADQCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAV 96
Query: 431 Y 433
Y
Sbjct: 97 Y 97
Score = 78.2 bits (184), Expect = 3e-15
Identities = 31/37 (83%), Positives = 37/37 (100%)
Frame = +3
Query: 147 EVRTGTYRQLFHPQQLITGKEDAANNYARGHYTIGKK 257
E+RTGTYRQLFHP+QL++GKEDAANNYARGHYT+GK+
Sbjct: 2 EIRTGTYRQLFHPEQLLSGKEDAANNYARGHYTVGKE 38
>SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 50
Score = 81.0 bits (191), Expect = 4e-16
Identities = 34/37 (91%), Positives = 37/37 (100%)
Frame = +3
Query: 147 EVRTGTYRQLFHPQQLITGKEDAANNYARGHYTIGKK 257
EVRTGTYRQLFHP+QLITGKEDAANNYARGHYT+GK+
Sbjct: 2 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKE 38
Score = 29.1 bits (62), Expect = 1.6
Identities = 12/14 (85%), Positives = 14/14 (100%)
Frame = +2
Query: 251 KEIVDLVLDRIRKL 292
KE++DLVLDRIRKL
Sbjct: 37 KELIDLVLDRIRKL 50
>SB_17881| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 458
Score = 78.6 bits (185), Expect = 2e-15
Identities = 36/83 (43%), Positives = 50/83 (60%)
Frame = +3
Query: 3 GIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFH 182
GI P G D + + N +++E GK+VPRAV VDLEP +D VR+G + Q+F
Sbjct: 242 GIDPTGTYHGDSDLQL--ERINVYYNEATGGKYVPRAVLVDLEPGTMDSVRSGPFGQIFR 299
Query: 183 PQQLITGKEDAANNYARGHYTIG 251
P + G+ A NN+A+GHYT G
Sbjct: 300 PDNFVFGQSGAGNNWAKGHYTEG 322
Score = 37.5 bits (83), Expect = 0.005
Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
Frame = +2
Query: 233 WSLHHWKE---IVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDY 400
W+ H+ E +VD VLD +RK A+ C LQGF + H LL+ ++ +Y
Sbjct: 314 WAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEY 372
>SB_47198| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 78.2 bits (184), Expect = 3e-15
Identities = 35/83 (42%), Positives = 50/83 (60%)
Frame = +3
Query: 3 GIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFH 182
GI P G D + + N +++E GK+VPRA+ VDLEP +D VR+G + Q+F
Sbjct: 29 GIDPTGTYHGDSDLQL--ERINVYYNEATGGKYVPRAILVDLEPGTMDSVRSGPFGQIFR 86
Query: 183 PQQLITGKEDAANNYARGHYTIG 251
P + G+ A NN+A+GHYT G
Sbjct: 87 PDNFVFGQSGAGNNWAKGHYTEG 109
Score = 37.5 bits (83), Expect = 0.005
Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
Frame = +2
Query: 233 WSLHHWKE---IVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDY 400
W+ H+ E +VD VLD +RK A+ C LQGF + H LL+ ++ +Y
Sbjct: 101 WAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEY 159
>SB_17879| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 77.0 bits (181), Expect = 6e-15
Identities = 34/83 (40%), Positives = 50/83 (60%)
Frame = +3
Query: 3 GIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFH 182
GI P G D + + N +++E GK+VPR+V +DLEP +D VR+G + Q+F
Sbjct: 29 GIDPTGTYHGDSDLQL--ERINVYYNEATGGKYVPRSVLIDLEPGTMDSVRSGPFGQIFR 86
Query: 183 PQQLITGKEDAANNYARGHYTIG 251
P + G+ A NN+A+GHYT G
Sbjct: 87 PDNFVFGQSGAGNNWAKGHYTEG 109
Score = 35.5 bits (78), Expect = 0.019
Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
Frame = +2
Query: 233 WSLHHWKE---IVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDY 400
W+ H+ E ++D VLD +RK A+ C +QGF + H LL+ ++ +Y
Sbjct: 101 WAKGHYTEGAELMDSVLDVVRKEAESCDCIQGFQLTHSLGGGTGSGMGTLLISKIREEY 159
>SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24)
Length = 149
Score = 75.8 bits (178), Expect = 1e-14
Identities = 32/37 (86%), Positives = 34/37 (91%)
Frame = +3
Query: 147 EVRTGTYRQLFHPQQLITGKEDAANNYARGHYTIGKK 257
EVR GTYR LFHP QLITGKEDAANNYARGHYT+GK+
Sbjct: 2 EVRMGTYRDLFHPDQLITGKEDAANNYARGHYTVGKE 38
>SB_59740| Best HMM Match : Tubulin (HMM E-Value=2.1e-25)
Length = 139
Score = 70.5 bits (165), Expect = 5e-13
Identities = 34/47 (72%), Positives = 34/47 (72%)
Frame = +2
Query: 293 ADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFVIY 433
ADQCTGLQGFLIFH LLMERLSVDYGKKSKLEF IY
Sbjct: 1 ADQCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAIY 47
>SB_39308| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 391
Score = 70.1 bits (164), Expect = 7e-13
Identities = 29/53 (54%), Positives = 38/53 (71%)
Frame = +3
Query: 93 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPQQLITGKEDAANNYARGHYTIG 251
GK+VPRAV VDLEP +D VR+G + Q+F P + G+ A NN+A+GHYT G
Sbjct: 2 GKYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEG 54
Score = 35.5 bits (78), Expect = 0.019
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
Frame = +2
Query: 233 WSLHHWKE---IVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDY 400
W+ H+ E +VD VLD +RK A+ C +QGF + H LL+ ++ +Y
Sbjct: 46 WAKGHYTEGAELVDSVLDVVRKEAESCDCIQGFQLTHSLGGGTGSGMVTLLILKIREEY 104
>SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 602
Score = 69.3 bits (162), Expect = 1e-12
Identities = 32/49 (65%), Positives = 35/49 (71%)
Frame = +2
Query: 287 KLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFVIY 433
K ADQCTGLQGFL+FH LLMERLSVDYGK+SKLEF +Y
Sbjct: 255 KHADQCTGLQGFLVFHSFGGGTGSGFSSLLMERLSVDYGKRSKLEFAVY 303
Score = 53.2 bits (122), Expect = 9e-08
Identities = 22/33 (66%), Positives = 27/33 (81%)
Frame = +3
Query: 3 GIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 101
GIQPDG MP+D++ DDSF+TFFSET +GKH
Sbjct: 224 GIQPDGHMPSDQSADRCDDSFSTFFSETASGKH 256
>SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27)
Length = 144
Score = 60.5 bits (140), Expect = 6e-10
Identities = 24/53 (45%), Positives = 35/53 (66%)
Frame = +3
Query: 93 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPQQLITGKEDAANNYARGHYTIG 251
G++VPR++ VDLEP +D VR G +F P + + AANN+A+GHY+ G
Sbjct: 13 GRYVPRSILVDLEPGTMDAVRGGPLGNMFRPDNFVNSQSGAANNWAKGHYSEG 65
Score = 28.3 bits (60), Expect = 2.8
Identities = 13/59 (22%), Positives = 27/59 (45%), Gaps = 3/59 (5%)
Frame = +2
Query: 233 WSLHHWKE---IVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDY 400
W+ H+ E ++D + D +RK A+ C +QG + L++ ++ +Y
Sbjct: 57 WAKGHYSEGAELIDNIFDVLRKEAENCDCMQGVQLIQALGGGTGSGLGTLILSKIREEY 115
>SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 112
Score = 55.2 bits (127), Expect = 2e-08
Identities = 25/65 (38%), Positives = 37/65 (56%)
Frame = +3
Query: 3 GIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFH 182
GI P G D + + N +++E GK+VPRA+ VDLEP +D VR+G + Q+F
Sbjct: 29 GIDPTGTYHGDSDLQL--ERINVYYNEATGGKYVPRAILVDLEPGTMDSVRSGPFGQIFR 86
Query: 183 PQQLI 197
P +
Sbjct: 87 PDNFV 91
>SB_25311| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 629
Score = 35.9 bits (79), Expect = 0.014
Identities = 18/59 (30%), Positives = 29/59 (49%)
Frame = +2
Query: 254 EIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFVI 430
E++D +D IRKLA+ C +QGF I H LL+ ++ +Y + F +
Sbjct: 19 ELMDSGMDCIRKLAENCDTVQGFQIAHSLGGGTGSGLGSLLLSKIREEYPDRLVSSFCV 77
>SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32)
Length = 488
Score = 34.3 bits (75), Expect = 0.043
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +3
Query: 108 RAVFVDLEPTVVDEVRTGTYRQLFHPQQLITGKEDAANNY 227
RAV +D+E VV+ + G +F QQLIT NN+
Sbjct: 76 RAVLIDMEEGVVNNILKGPLHDVFDCQQLITDVSGCGNNW 115
>SB_1004| Best HMM Match : CPSase_sm_chain (HMM E-Value=0)
Length = 2007
Score = 29.1 bits (62), Expect = 1.6
Identities = 22/68 (32%), Positives = 35/68 (51%)
Frame = +3
Query: 201 GKEDAANNYARGHYTIGKKS*IWFWTESASSLTSVPVCKDS*SSTPSVEVPALGSLPY*W 380
G + + +Y RG + + FW+ S+SS T VP +T + VP++G Y
Sbjct: 143 GIKKQSGSYGRGTDFV-RNGKTQFWSSSSSSPT-VPN-----KTTNGISVPSVGRSSYST 195
Query: 381 SVSPLTTA 404
VSP+T+A
Sbjct: 196 RVSPITSA 203
>SB_39846| Best HMM Match : SIR2 (HMM E-Value=1.4013e-45)
Length = 427
Score = 28.3 bits (60), Expect = 2.8
Identities = 19/96 (19%), Positives = 40/96 (41%)
Frame = -3
Query: 293 RACGFCPKPNLRFLSNXXXXXXXXXGRIFLTSNKLLWMKQLSVCASADLINNSRFKIDED 114
+ACG KP + F + L + LW+ + ++ ++ ++ RF +
Sbjct: 331 KACGGILKPEVVFFGDSVPKQIVNIAYDRLAESDALWI----IGSTVEVYSSYRFATEAS 386
Query: 113 STGYVLASSGLAEESVERIVSTPDGLVCGHLAIRLD 6
G +A + + +++ S VCG + +LD
Sbjct: 387 KQGKPIAILNIGKTRADKLASLKVSGVCGTVLPKLD 422
>SB_5299| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 797
Score = 28.3 bits (60), Expect = 2.8
Identities = 13/38 (34%), Positives = 17/38 (44%)
Frame = +3
Query: 3 GIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAV 116
GI+PDGQ D+ +NT F G P A+
Sbjct: 709 GIRPDGQGLVDEGFKTASGIYNTCFERLGMNFQTPEAI 746
>SB_15838| Best HMM Match : Peptidase_A17 (HMM E-Value=7.9e-32)
Length = 1027
Score = 27.9 bits (59), Expect = 3.8
Identities = 17/50 (34%), Positives = 27/50 (54%)
Frame = +3
Query: 105 PRAVFVDLEPTVVDEVRTGTYRQLFHPQQLITGKEDAANNYARGHYTIGK 254
P V+ L T VD+V+TG P+QL+ K++A+ RG + + K
Sbjct: 126 PETVYQLLTNTYVDDVQTGG----DDPEQLLRFKQEASEIMERGGFQLHK 171
>SB_13469| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2429
Score = 27.9 bits (59), Expect = 3.8
Identities = 18/40 (45%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = -3
Query: 161 ASADLINNSRFKID-EDSTGYVLASSGLAEESVERIVSTP 45
ASAD + + ID +D++G L SGL EE +E IV P
Sbjct: 1043 ASADKVKSPVLSIDLKDTSGQKLEISGLKEE-IELIVEGP 1081
>SB_53740| Best HMM Match : Thyroglobulin_1 (HMM E-Value=0)
Length = 1980
Score = 27.1 bits (57), Expect = 6.6
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = -2
Query: 300 WSASLRILSKTKSTISFQWCSDHGH 226
WS + +L ++ T S WC+ GH
Sbjct: 359 WSLYVSLLRASRKTGSLPWCTSDGH 383
>SB_21099| Best HMM Match : Thyroglobulin_1 (HMM E-Value=1e-25)
Length = 137
Score = 27.1 bits (57), Expect = 6.6
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = -2
Query: 300 WSASLRILSKTKSTISFQWCSDHGH 226
WS + +L ++ T S WC+ GH
Sbjct: 4 WSLYVSLLRASRKTGSLPWCTSDGH 28
>SB_18951| Best HMM Match : EGF (HMM E-Value=2.1e-06)
Length = 1223
Score = 27.1 bits (57), Expect = 6.6
Identities = 14/30 (46%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Frame = -1
Query: 109 RGTCLPAPVSLKKV-LKESSPPPMVLSVGI 23
RGTCLP+ L++V LK+ + LSVG+
Sbjct: 759 RGTCLPSRDMLRRVLLKKGAREQGTLSVGV 788
>SB_57099| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2509
Score = 27.1 bits (57), Expect = 6.6
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +2
Query: 239 LHHWKEIVDLVLDRIRKLADQCTGLQGF 322
L W ++ + V +R+R+LA GL GF
Sbjct: 1394 LDRWDQVTEQVDERMRRLARGLQGLHGF 1421
>SB_54574| Best HMM Match : WD40 (HMM E-Value=0)
Length = 1050
Score = 26.6 bits (56), Expect = 8.7
Identities = 17/49 (34%), Positives = 25/49 (51%)
Frame = -3
Query: 176 QLSVCASADLINNSRFKIDEDSTGYVLASSGLAEESVERIVSTPDGLVC 30
Q + ASAD K+ + STG +L S G + V I +PD ++C
Sbjct: 940 QRLISASADCFA----KVWDASTGELLLSLGRHPDVVRSISFSPDNMIC 984
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,177,117
Number of Sequences: 59808
Number of extensions: 275772
Number of successful extensions: 756
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 683
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 754
length of database: 16,821,457
effective HSP length: 76
effective length of database: 12,276,049
effective search space used: 822495283
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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