Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10879X
         (433 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY334011-1|AAR01136.1|  188|Anopheles gambiae beta-tubulin protein.    36   8e-04
AY334010-1|AAR01135.1|  188|Anopheles gambiae beta-tubulin protein.    36   8e-04
AY334009-1|AAR01134.1|  188|Anopheles gambiae beta-tubulin protein.    36   8e-04
AY334008-1|AAR01133.1|  188|Anopheles gambiae beta-tubulin protein.    36   8e-04
U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles ...    32   0.008
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    24   2.7  
AY028784-1|AAK32958.2|  499|Anopheles gambiae cytochrome P450 pr...    23   4.6  

>AY334011-1|AAR01136.1|  188|Anopheles gambiae beta-tubulin protein.
          Length = 188

 Score = 35.5 bits (78), Expect = 8e-04
 Identities = 17/49 (34%), Positives = 25/49 (51%)
 Frame = +2

Query: 254 EIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDY 400
           E+VD VLD +RK  + C  LQGF + H            LL+ ++  +Y
Sbjct: 7   ELVDAVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEY 55


>AY334010-1|AAR01135.1|  188|Anopheles gambiae beta-tubulin protein.
          Length = 188

 Score = 35.5 bits (78), Expect = 8e-04
 Identities = 17/49 (34%), Positives = 25/49 (51%)
 Frame = +2

Query: 254 EIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDY 400
           E+VD VLD +RK  + C  LQGF + H            LL+ ++  +Y
Sbjct: 7   ELVDAVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEY 55


>AY334009-1|AAR01134.1|  188|Anopheles gambiae beta-tubulin protein.
          Length = 188

 Score = 35.5 bits (78), Expect = 8e-04
 Identities = 17/49 (34%), Positives = 25/49 (51%)
 Frame = +2

Query: 254 EIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDY 400
           E+VD VLD +RK  + C  LQGF + H            LL+ ++  +Y
Sbjct: 7   ELVDAVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEY 55


>AY334008-1|AAR01133.1|  188|Anopheles gambiae beta-tubulin protein.
          Length = 188

 Score = 35.5 bits (78), Expect = 8e-04
 Identities = 17/49 (34%), Positives = 25/49 (51%)
 Frame = +2

Query: 254 EIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDY 400
           E+VD VLD +RK  + C  LQGF + H            LL+ ++  +Y
Sbjct: 7   ELVDAVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEY 55


>U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles
           gambiae putativetubulin alpha chain mRNA, complete cds.
           ).
          Length = 91

 Score = 32.3 bits (70), Expect = 0.008
 Identities = 22/58 (37%), Positives = 24/58 (41%)
 Frame = +1

Query: 4   ASSLMARCPQTRPSGVETILSTLSSARPELASTYPVXXXXXXXXXXXXXXXXAHTDSC 177
           AS+   RCP+TR S      ST SS R   AST PV                A T SC
Sbjct: 29  ASNRTVRCPRTRRSEAVMTRSTPSSPRLAQASTCPVPCSSIWSRPSSMRCAPARTASC 86


>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1248

 Score = 23.8 bits (49), Expect = 2.7
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = +1

Query: 25  CPQTRPSGVETILSTLSSARPELAS 99
           C   RPS ++   ++ S  RP+LA+
Sbjct: 164 CGSARPSRIDVAFASPSICRPDLAA 188


>AY028784-1|AAK32958.2|  499|Anopheles gambiae cytochrome P450
           protein.
          Length = 499

 Score = 23.0 bits (47), Expect = 4.6
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = +2

Query: 47  GWRRFFQHFLQRDRSWQAR 103
           GW   + HF QR R W  R
Sbjct: 12  GWLWIYLHFNQRYRFWVER 30


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 468,898
Number of Sequences: 2352
Number of extensions: 8653
Number of successful extensions: 18
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 35717724
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)