Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10879X
(433 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 168 1e-42
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 168 1e-42
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 168 1e-42
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 168 1e-42
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 149 6e-37
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 148 2e-36
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 145 1e-35
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 145 1e-35
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 144 2e-35
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 144 2e-35
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 141 2e-34
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 141 2e-34
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 131 2e-31
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 131 2e-31
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 130 6e-31
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 111 2e-25
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 84 5e-17
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 83 8e-17
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 83 8e-17
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 81 3e-16
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 81 3e-16
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 78 3e-15
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 66 1e-11
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 66 1e-11
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 36 0.013
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 36 0.013
AL032646-5|CAA21682.1| 1798|Caenorhabditis elegans Hypothetical ... 28 2.5
U46673-6|AAC48149.2| 1382|Caenorhabditis elegans P-glycoprotein ... 27 4.4
U53153-8|AAC69040.1| 428|Caenorhabditis elegans Nuclear hormone... 27 5.8
AY305833-1|AAR11978.1| 428|Caenorhabditis elegans nuclear recep... 27 5.8
AF273785-1|AAG15134.1| 423|Caenorhabditis elegans nuclear recep... 27 5.8
Z83230-1|CAB05741.1| 1049|Caenorhabditis elegans Hypothetical pr... 27 7.7
U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p... 27 7.7
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 168 bits (409), Expect = 1e-42
Identities = 72/85 (84%), Positives = 82/85 (96%)
Frame = +3
Query: 3 GIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFH 182
GIQPDGQMP+DK++GG DDSF+TFFSETG+G+HVPRAV VDLEPTV+DE+RTGTYR LFH
Sbjct: 29 GIQPDGQMPSDKSLGGSDDSFSTFFSETGSGRHVPRAVMVDLEPTVIDEIRTGTYRSLFH 88
Query: 183 PQQLITGKEDAANNYARGHYTIGKK 257
P+QLITGKEDAANNYARGHYTIGK+
Sbjct: 89 PEQLITGKEDAANNYARGHYTIGKE 113
Score = 89.0 bits (211), Expect = 1e-18
Identities = 42/61 (68%), Positives = 46/61 (75%)
Frame = +2
Query: 251 KEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFVI 430
KEI+DL LDRIR+LAD CTGLQGFL+FH LLMERLSVDYGKK+KLEF I
Sbjct: 112 KEIIDLTLDRIRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKAKLEFSI 171
Query: 431 Y 433
Y
Sbjct: 172 Y 172
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 168 bits (409), Expect = 1e-42
Identities = 72/85 (84%), Positives = 82/85 (96%)
Frame = +3
Query: 3 GIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFH 182
GIQPDGQMP+DK++GG DDSF+TFFSETG+G+HVPRAV VDLEPTV+DE+RTGTYR LFH
Sbjct: 28 GIQPDGQMPSDKSLGGSDDSFSTFFSETGSGRHVPRAVMVDLEPTVIDEIRTGTYRSLFH 87
Query: 183 PQQLITGKEDAANNYARGHYTIGKK 257
P+QLITGKEDAANNYARGHYTIGK+
Sbjct: 88 PEQLITGKEDAANNYARGHYTIGKE 112
Score = 89.0 bits (211), Expect = 1e-18
Identities = 42/61 (68%), Positives = 46/61 (75%)
Frame = +2
Query: 251 KEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFVI 430
KEI+DL LDRIR+LAD CTGLQGFL+FH LLMERLSVDYGKK+KLEF I
Sbjct: 111 KEIIDLTLDRIRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKAKLEFSI 170
Query: 431 Y 433
Y
Sbjct: 171 Y 171
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 168 bits (409), Expect = 1e-42
Identities = 72/85 (84%), Positives = 82/85 (96%)
Frame = +3
Query: 3 GIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFH 182
GIQPDGQMP+DK++GG DDSF+TFFSETG+G+HVPRAV VDLEPTV+DE+RTGTYR LFH
Sbjct: 29 GIQPDGQMPSDKSLGGSDDSFSTFFSETGSGRHVPRAVMVDLEPTVIDEIRTGTYRSLFH 88
Query: 183 PQQLITGKEDAANNYARGHYTIGKK 257
P+QLITGKEDAANNYARGHYTIGK+
Sbjct: 89 PEQLITGKEDAANNYARGHYTIGKE 113
Score = 89.0 bits (211), Expect = 1e-18
Identities = 42/61 (68%), Positives = 46/61 (75%)
Frame = +2
Query: 251 KEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFVI 430
KEI+DL LDRIR+LAD CTGLQGFL+FH LLMERLSVDYGKK+KLEF I
Sbjct: 112 KEIIDLTLDRIRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKAKLEFSI 171
Query: 431 Y 433
Y
Sbjct: 172 Y 172
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 168 bits (409), Expect = 1e-42
Identities = 72/85 (84%), Positives = 82/85 (96%)
Frame = +3
Query: 3 GIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFH 182
GIQPDGQMP+DK++GG DDSF+TFFSETG+G+HVPRAV VDLEPTV+DE+RTGTYR LFH
Sbjct: 29 GIQPDGQMPSDKSLGGSDDSFSTFFSETGSGRHVPRAVMVDLEPTVIDEIRTGTYRSLFH 88
Query: 183 PQQLITGKEDAANNYARGHYTIGKK 257
P+QLITGKEDAANNYARGHYTIGK+
Sbjct: 89 PEQLITGKEDAANNYARGHYTIGKE 113
Score = 89.0 bits (211), Expect = 1e-18
Identities = 42/61 (68%), Positives = 46/61 (75%)
Frame = +2
Query: 251 KEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFVI 430
KEI+DL LDRIR+LAD CTGLQGFL+FH LLMERLSVDYGKK+KLEF I
Sbjct: 112 KEIIDLTLDRIRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKAKLEFSI 171
Query: 431 Y 433
Y
Sbjct: 172 Y 172
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 149 bits (362), Expect = 6e-37
Identities = 66/85 (77%), Positives = 75/85 (88%)
Frame = +3
Query: 3 GIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFH 182
GI PDG MP D + G D S+NTFFSET +GKHVPRA+FVDLEPTV+DEVRTGTY +LFH
Sbjct: 29 GITPDGLMPDDTSYGVEDQSYNTFFSETPSGKHVPRAIFVDLEPTVIDEVRTGTYAKLFH 88
Query: 183 PQQLITGKEDAANNYARGHYTIGKK 257
P+QLI+GKEDAANNYARGHYTIGK+
Sbjct: 89 PEQLISGKEDAANNYARGHYTIGKE 113
Score = 78.6 bits (185), Expect = 2e-15
Identities = 34/61 (55%), Positives = 45/61 (73%)
Frame = +2
Query: 251 KEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFVI 430
KE++D+V+DR+R+L ++C LQGFLIFH L+MERLS+DYGKK+KLEF I
Sbjct: 112 KELIDVVMDRVRRLTERCQSLQGFLIFHSFGGGTGSGFTSLVMERLSIDYGKKAKLEFSI 171
Query: 431 Y 433
Y
Sbjct: 172 Y 172
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 148 bits (358), Expect = 2e-36
Identities = 64/85 (75%), Positives = 75/85 (88%)
Frame = +3
Query: 3 GIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFH 182
GIQPDG + + ++G DDSFNTFFSET AGKHVPRA+ VDLEPT +DE+RTGTY+ LFH
Sbjct: 34 GIQPDGMINEEDSLGVDDDSFNTFFSETMAGKHVPRAIMVDLEPTPIDEIRTGTYKTLFH 93
Query: 183 PQQLITGKEDAANNYARGHYTIGKK 257
P+QL+TGKEDAANNYARGHYTIGK+
Sbjct: 94 PEQLLTGKEDAANNYARGHYTIGKE 118
Score = 84.2 bits (199), Expect = 4e-17
Identities = 38/61 (62%), Positives = 45/61 (73%)
Frame = +2
Query: 251 KEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFVI 430
KEI+D+V+DR+R+L + C GLQGFL+FH LLMERLSVDYGKKSKLEF I
Sbjct: 117 KEIIDVVMDRVRRLVENCRGLQGFLVFHSFGGGTGSGFTALLMERLSVDYGKKSKLEFCI 176
Query: 431 Y 433
Y
Sbjct: 177 Y 177
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 145 bits (352), Expect = 1e-35
Identities = 63/85 (74%), Positives = 77/85 (90%)
Frame = +3
Query: 3 GIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFH 182
GIQPDG MPT T G +SF TFFS+TG+G++VPR++FVDLEPTVVDE+RTGTY++LFH
Sbjct: 29 GIQPDGTMPTQSTNEG--ESFTTFFSDTGSGRYVPRSIFVDLEPTVVDEIRTGTYKKLFH 86
Query: 183 PQQLITGKEDAANNYARGHYTIGKK 257
P+Q+ITGKEDAANNYARGHYT+GK+
Sbjct: 87 PEQMITGKEDAANNYARGHYTVGKE 111
Score = 85.8 bits (203), Expect = 1e-17
Identities = 40/61 (65%), Positives = 45/61 (73%)
Frame = +2
Query: 251 KEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFVI 430
KE++D VLDRIR+LAD C+GLQGF +FH LLMERLSVDYGKKSKLEF I
Sbjct: 110 KELIDTVLDRIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSI 169
Query: 431 Y 433
Y
Sbjct: 170 Y 170
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 145 bits (352), Expect = 1e-35
Identities = 63/85 (74%), Positives = 77/85 (90%)
Frame = +3
Query: 3 GIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFH 182
GIQPDG MPT T G +SF TFFS+TG+G++VPR++FVDLEPTVVDE+RTGTY++LFH
Sbjct: 29 GIQPDGTMPTQSTNEG--ESFTTFFSDTGSGRYVPRSIFVDLEPTVVDEIRTGTYKKLFH 86
Query: 183 PQQLITGKEDAANNYARGHYTIGKK 257
P+Q+ITGKEDAANNYARGHYT+GK+
Sbjct: 87 PEQMITGKEDAANNYARGHYTVGKE 111
Score = 85.8 bits (203), Expect = 1e-17
Identities = 40/61 (65%), Positives = 45/61 (73%)
Frame = +2
Query: 251 KEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFVI 430
KE++D VLDRIR+LAD C+GLQGF +FH LLMERLSVDYGKKSKLEF I
Sbjct: 110 KELIDTVLDRIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSI 169
Query: 431 Y 433
Y
Sbjct: 170 Y 170
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 144 bits (349), Expect = 2e-35
Identities = 62/85 (72%), Positives = 77/85 (90%)
Frame = +3
Query: 3 GIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFH 182
GIQPDG MP+D+ G +SF TFFS+TG G++VPR++FVDLEPTVVDE+RTGTY++LFH
Sbjct: 29 GIQPDGTMPSDQQADG--ESFTTFFSDTGNGRYVPRSIFVDLEPTVVDEIRTGTYKKLFH 86
Query: 183 PQQLITGKEDAANNYARGHYTIGKK 257
P+Q+ITGKEDAANNYARGHYT+GK+
Sbjct: 87 PEQMITGKEDAANNYARGHYTVGKE 111
Score = 85.8 bits (203), Expect = 1e-17
Identities = 40/61 (65%), Positives = 45/61 (73%)
Frame = +2
Query: 251 KEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFVI 430
KE++D VLDRIR+LAD C+GLQGF +FH LLMERLSVDYGKKSKLEF I
Sbjct: 110 KELIDTVLDRIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSI 169
Query: 431 Y 433
Y
Sbjct: 170 Y 170
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 144 bits (349), Expect = 2e-35
Identities = 62/85 (72%), Positives = 77/85 (90%)
Frame = +3
Query: 3 GIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFH 182
GIQPDG MP+D+ G +SF TFFS+TG G++VPR++FVDLEPTVVDE+RTGTY++LFH
Sbjct: 29 GIQPDGTMPSDQQADG--ESFTTFFSDTGNGRYVPRSIFVDLEPTVVDEIRTGTYKKLFH 86
Query: 183 PQQLITGKEDAANNYARGHYTIGKK 257
P+Q+ITGKEDAANNYARGHYT+GK+
Sbjct: 87 PEQMITGKEDAANNYARGHYTVGKE 111
Score = 85.8 bits (203), Expect = 1e-17
Identities = 40/61 (65%), Positives = 45/61 (73%)
Frame = +2
Query: 251 KEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFVI 430
KE++D VLDRIR+LAD C+GLQGF +FH LLMERLSVDYGKKSKLEF I
Sbjct: 110 KELIDTVLDRIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSI 169
Query: 431 Y 433
Y
Sbjct: 170 Y 170
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 141 bits (341), Expect = 2e-34
Identities = 61/85 (71%), Positives = 76/85 (89%)
Frame = +3
Query: 3 GIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFH 182
GIQPDG MP+++ GG SF TFFS+TG G++VPR++FVDLEPTVVDE+RTG Y++LFH
Sbjct: 29 GIQPDGTMPSEQQNEGG--SFTTFFSDTGNGRYVPRSIFVDLEPTVVDEIRTGNYKKLFH 86
Query: 183 PQQLITGKEDAANNYARGHYTIGKK 257
P+Q+ITGKEDAANNYARGHYT+GK+
Sbjct: 87 PEQMITGKEDAANNYARGHYTVGKE 111
Score = 84.2 bits (199), Expect = 4e-17
Identities = 39/61 (63%), Positives = 44/61 (72%)
Frame = +2
Query: 251 KEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFVI 430
KE++D LDRIR+LAD C+GLQGF +FH LLMERLSVDYGKKSKLEF I
Sbjct: 110 KELIDTTLDRIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSI 169
Query: 431 Y 433
Y
Sbjct: 170 Y 170
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 141 bits (341), Expect = 2e-34
Identities = 61/85 (71%), Positives = 76/85 (89%)
Frame = +3
Query: 3 GIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFH 182
GIQPDG MP+++ GG SF TFFS+TG G++VPR++FVDLEPTVVDE+RTG Y++LFH
Sbjct: 29 GIQPDGTMPSEQQNEGG--SFTTFFSDTGNGRYVPRSIFVDLEPTVVDEIRTGNYKKLFH 86
Query: 183 PQQLITGKEDAANNYARGHYTIGKK 257
P+Q+ITGKEDAANNYARGHYT+GK+
Sbjct: 87 PEQMITGKEDAANNYARGHYTVGKE 111
Score = 84.2 bits (199), Expect = 4e-17
Identities = 39/61 (63%), Positives = 44/61 (72%)
Frame = +2
Query: 251 KEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFVI 430
KE++D LDRIR+LAD C+GLQGF +FH LLMERLSVDYGKKSKLEF I
Sbjct: 110 KELIDTTLDRIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSI 169
Query: 431 Y 433
Y
Sbjct: 170 Y 170
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 131 bits (316), Expect = 2e-31
Identities = 59/85 (69%), Positives = 68/85 (80%)
Frame = +3
Query: 3 GIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFH 182
GIQPDG D T ++ NTFF+ET GKHVPR +FVDLEPTVVDEVRTGTYR LFH
Sbjct: 35 GIQPDGYHVEDDTYDEETETINTFFAETAGGKHVPRCLFVDLEPTVVDEVRTGTYRSLFH 94
Query: 183 PQQLITGKEDAANNYARGHYTIGKK 257
P+QL++GKEDAAN YARG YTIG++
Sbjct: 95 PEQLLSGKEDAANCYARGRYTIGRE 119
Score = 77.0 bits (181), Expect = 5e-15
Identities = 33/61 (54%), Positives = 44/61 (72%)
Frame = +2
Query: 251 KEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFVI 430
+E++D+V+DR+++LA+ C GLQGF+IFH LLMERLS +YGKK KLEF I
Sbjct: 118 REMIDVVMDRVKRLAENCNGLQGFVIFHSFGGGTGSGFLSLLMERLSTEYGKKPKLEFAI 177
Query: 431 Y 433
Y
Sbjct: 178 Y 178
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 131 bits (316), Expect = 2e-31
Identities = 59/85 (69%), Positives = 68/85 (80%)
Frame = +3
Query: 3 GIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFH 182
GIQPDG D T ++ NTFF+ET GKHVPR +FVDLEPTVVDEVRTGTYR LFH
Sbjct: 7 GIQPDGYHVEDDTYDEETETINTFFAETAGGKHVPRCLFVDLEPTVVDEVRTGTYRSLFH 66
Query: 183 PQQLITGKEDAANNYARGHYTIGKK 257
P+QL++GKEDAAN YARG YTIG++
Sbjct: 67 PEQLLSGKEDAANCYARGRYTIGRE 91
Score = 77.0 bits (181), Expect = 5e-15
Identities = 33/61 (54%), Positives = 44/61 (72%)
Frame = +2
Query: 251 KEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFVI 430
+E++D+V+DR+++LA+ C GLQGF+IFH LLMERLS +YGKK KLEF I
Sbjct: 90 REMIDVVMDRVKRLAENCNGLQGFVIFHSFGGGTGSGFLSLLMERLSTEYGKKPKLEFAI 149
Query: 431 Y 433
Y
Sbjct: 150 Y 150
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 130 bits (313), Expect = 6e-31
Identities = 57/85 (67%), Positives = 69/85 (81%)
Frame = +3
Query: 3 GIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFH 182
GI PDG T G S TFFS+TG G+HVPR++FVDLEPTVVDE+RTG Y++LFH
Sbjct: 29 GILPDG---TSMEPDGNSGSLGTFFSDTGYGRHVPRSIFVDLEPTVVDEIRTGAYKKLFH 85
Query: 183 PQQLITGKEDAANNYARGHYTIGKK 257
P+Q++TGKEDAANNYARGHYT+GK+
Sbjct: 86 PEQMLTGKEDAANNYARGHYTVGKE 110
Score = 78.2 bits (184), Expect = 2e-15
Identities = 36/61 (59%), Positives = 42/61 (68%)
Frame = +2
Query: 251 KEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFVI 430
KEI+D LDRIR+LA+ C GLQGF +FH +LMERLS +YGKKSKLEF I
Sbjct: 109 KEIIDTTLDRIRRLANNCEGLQGFFVFHSFGGGTGSGFTSMLMERLSAEYGKKSKLEFSI 168
Query: 431 Y 433
Y
Sbjct: 169 Y 169
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 111 bits (268), Expect = 2e-25
Identities = 48/66 (72%), Positives = 55/66 (83%)
Frame = +3
Query: 60 SFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPQQLITGKEDAANNYARGH 239
S FFSE+ GKHVPRA++VDLEPTV+DE+R G Y LFHP Q+I GKEDAANNYARGH
Sbjct: 51 SLQAFFSESMNGKHVPRAIYVDLEPTVLDEIRNGVYGNLFHPDQIINGKEDAANNYARGH 110
Query: 240 YTIGKK 257
YTIGK+
Sbjct: 111 YTIGKE 116
Score = 79.4 bits (187), Expect = 1e-15
Identities = 36/61 (59%), Positives = 44/61 (72%)
Frame = +2
Query: 251 KEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFVI 430
KE++D+VLDRIRK + C GLQGFL+FH LLMERLSV++GKKSKLEF +
Sbjct: 115 KELIDVVLDRIRKQTENCEGLQGFLVFHSFGGGTGSGFSSLLMERLSVEFGKKSKLEFSV 174
Query: 431 Y 433
Y
Sbjct: 175 Y 175
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 83.8 bits (198), Expect = 5e-17
Identities = 38/83 (45%), Positives = 52/83 (62%)
Frame = +3
Query: 3 GIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFH 182
GIQPDG + + + N +++E GK+VPRAV VDLEP +D VR+G + QLF
Sbjct: 29 GIQPDGTYKGESDLQL--ERINVYYNEANGGKYVPRAVLVDLEPGTMDSVRSGPFGQLFR 86
Query: 183 PQQLITGKEDAANNYARGHYTIG 251
P + G+ A NN+A+GHYT G
Sbjct: 87 PDNFVFGQSGAGNNWAKGHYTEG 109
Score = 36.7 bits (81), Expect = 0.007
Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 3/69 (4%)
Frame = +2
Query: 233 WSLHHWKE---IVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYG 403
W+ H+ E +VD VLD +RK A+ C LQGF + H LL+ ++ +Y
Sbjct: 101 WAKGHYTEGAELVDNVLDVVRKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYP 160
Query: 404 KKSKLEFVI 430
+ F +
Sbjct: 161 DRIMSSFSV 169
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 83.0 bits (196), Expect = 8e-17
Identities = 38/83 (45%), Positives = 52/83 (62%)
Frame = +3
Query: 3 GIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFH 182
GI P GQ D + + N +++E G+ K+VPRAV VDLEP +D VR+G + QLF
Sbjct: 29 GIDPSGQYVGDSDLQL--ERINVYYNEAGSNKYVPRAVLVDLEPGTMDSVRSGPFGQLFR 86
Query: 183 PQQLITGKEDAANNYARGHYTIG 251
P + G+ A NN+A+GHYT G
Sbjct: 87 PDNYVFGQSGAGNNWAKGHYTEG 109
Score = 33.1 bits (72), Expect = 0.088
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Frame = +2
Query: 233 WSLHHWKE---IVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDY 400
W+ H+ E +VD VLD +RK A+ LQGF + H LL+ ++ +Y
Sbjct: 101 WAKGHYTEGAELVDNVLDVVRKEAESTDCLQGFQLTHSLGGGTGSGMGTLLISKIREEY 159
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 83.0 bits (196), Expect = 8e-17
Identities = 38/83 (45%), Positives = 52/83 (62%)
Frame = +3
Query: 3 GIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFH 182
GI P GQ D + + N +++E G+ K+VPRAV VDLEP +D VR+G + QLF
Sbjct: 29 GIDPSGQYVGDSDLQL--ERINVYYNEAGSNKYVPRAVLVDLEPGTMDSVRSGPFGQLFR 86
Query: 183 PQQLITGKEDAANNYARGHYTIG 251
P + G+ A NN+A+GHYT G
Sbjct: 87 PDNYVFGQSGAGNNWAKGHYTEG 109
Score = 33.1 bits (72), Expect = 0.088
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Frame = +2
Query: 233 WSLHHWKE---IVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDY 400
W+ H+ E +VD VLD +RK A+ LQGF + H LL+ ++ +Y
Sbjct: 101 WAKGHYTEGAELVDNVLDVVRKEAESTDCLQGFQLTHSLGGGTGSGMGTLLISKIREEY 159
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 81.4 bits (192), Expect = 3e-16
Identities = 37/83 (44%), Positives = 52/83 (62%)
Frame = +3
Query: 3 GIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFH 182
GIQPDG + + + + +++E GK+VPRAV VDLEP +D VR+G + QLF
Sbjct: 29 GIQPDGTFKGESDLQL--ERIDVYYNEANNGKYVPRAVLVDLEPGTMDSVRSGPFGQLFR 86
Query: 183 PQQLITGKEDAANNYARGHYTIG 251
P + G+ A NN+A+GHYT G
Sbjct: 87 PDNFVFGQSGAGNNWAKGHYTEG 109
Score = 35.5 bits (78), Expect = 0.017
Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 3/69 (4%)
Frame = +2
Query: 233 WSLHHWKE---IVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYG 403
W+ H+ E +VD VLD IRK A+ C LQGF + H LL+ ++ ++
Sbjct: 101 WAKGHYTEGAELVDNVLDVIRKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEFP 160
Query: 404 KKSKLEFVI 430
+ F +
Sbjct: 161 DRIMSSFSV 169
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 81.0 bits (191), Expect = 3e-16
Identities = 37/83 (44%), Positives = 52/83 (62%)
Frame = +3
Query: 3 GIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFH 182
GIQPDG + + + + +++E GK+VPRAV VDLEP +D VR+G + QLF
Sbjct: 29 GIQPDGTFKGETDLQL--ERIDVYYNEANNGKYVPRAVLVDLEPGTMDSVRSGPFGQLFR 86
Query: 183 PQQLITGKEDAANNYARGHYTIG 251
P + G+ A NN+A+GHYT G
Sbjct: 87 PDNFVFGQSGAGNNWAKGHYTEG 109
Score = 37.1 bits (82), Expect = 0.005
Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 3/69 (4%)
Frame = +2
Query: 233 WSLHHWKE---IVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYG 403
W+ H+ E +VD VLD IRK A+ C LQGF + H LL+ ++ +Y
Sbjct: 101 WAKGHYTEGAELVDNVLDVIRKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYP 160
Query: 404 KKSKLEFVI 430
+ F +
Sbjct: 161 DRIMSSFSV 169
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 77.8 bits (183), Expect = 3e-15
Identities = 36/83 (43%), Positives = 48/83 (57%)
Frame = +3
Query: 3 GIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFH 182
GI P G D + + N +++E GK+VPRA VDLEP +D VR G + QLF
Sbjct: 29 GIDPTGAYNGDSDLQL--ERINVYYNEASGGKYVPRACLVDLEPGTMDSVRAGPFGQLFR 86
Query: 183 PQQLITGKEDAANNYARGHYTIG 251
P + G+ A NN+A+GHYT G
Sbjct: 87 PDNFVFGQSGAGNNWAKGHYTEG 109
Score = 38.3 bits (85), Expect = 0.002
Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
Frame = +2
Query: 233 WSLHHWKE---IVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYG 403
W+ H+ E +VD VLD +RK A+ C LQGF + H LL+ ++ +Y
Sbjct: 101 WAKGHYTEGAELVDNVLDVVRKEAESCDCLQGFQMTHSLGGGTGSGMGTLLISKIREEYP 160
Query: 404 KKSKLEFVI 430
+ + F +
Sbjct: 161 DRIMMTFSV 169
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 65.7 bits (153), Expect = 1e-11
Identities = 30/83 (36%), Positives = 49/83 (59%)
Frame = +3
Query: 3 GIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFH 182
G+Q DG D G + +++ E K+VPRA+ VDL+P ++ VR+ Y +LF
Sbjct: 29 GLQTDGTYKGDN--GSQLERITSYYKEMEGRKYVPRAILVDLDPESINYVRSTQYGKLFD 86
Query: 183 PQQLITGKEDAANNYARGHYTIG 251
P+ ++G+ A NN++RG+Y G
Sbjct: 87 PENAVSGESGAGNNWSRGYYEQG 109
Score = 34.3 bits (75), Expect = 0.038
Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Frame = +2
Query: 233 WSLHHWK---EIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYG 403
WS +++ EIVD VL IR+ A+ L+GF + H LL+ +L +Y
Sbjct: 101 WSRGYYEQGAEIVDKVLSVIRREAEAADSLEGFQLIHSLGGGTGSGLGSLLISKLREEYS 160
Query: 404 KKS 412
K+
Sbjct: 161 DKT 163
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 65.7 bits (153), Expect = 1e-11
Identities = 30/83 (36%), Positives = 49/83 (59%)
Frame = +3
Query: 3 GIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFH 182
G+Q DG D G + +++ E K+VPRA+ VDL+P ++ VR+ Y +LF
Sbjct: 29 GLQTDGTYKGDN--GSQLERITSYYKEMEGRKYVPRAILVDLDPESINYVRSTQYGKLFD 86
Query: 183 PQQLITGKEDAANNYARGHYTIG 251
P+ ++G+ A NN++RG+Y G
Sbjct: 87 PENAVSGESGAGNNWSRGYYEQG 109
Score = 34.3 bits (75), Expect = 0.038
Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Frame = +2
Query: 233 WSLHHWK---EIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYG 403
WS +++ EIVD VL IR+ A+ L+GF + H LL+ +L +Y
Sbjct: 101 WSRGYYEQGAEIVDKVLSVIRREAEAADSLEGFQLIHSLGGGTGSGLGSLLISKLREEYS 160
Query: 404 KKS 412
K+
Sbjct: 161 DKT 163
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 35.9 bits (79), Expect = 0.013
Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Frame = +3
Query: 54 DDSFNTFFSETGAGKHVPRAVFVDLEPTVVD-EVRTGTYRQLFHPQQLITGKE--DAANN 224
+D + F + +VPRAV VDLEP V++ +++ + LF+ + A NN
Sbjct: 46 NDKKDLLFYQADDDHYVPRAVLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNN 105
Query: 225 YARGH 239
+A G+
Sbjct: 106 WASGY 110
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 35.9 bits (79), Expect = 0.013
Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Frame = +3
Query: 54 DDSFNTFFSETGAGKHVPRAVFVDLEPTVVD-EVRTGTYRQLFHPQQLITGKE--DAANN 224
+D + F + +VPRAV VDLEP V++ +++ + LF+ + A NN
Sbjct: 46 NDKKDLLFYQADDDHYVPRAVLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNN 105
Query: 225 YARGH 239
+A G+
Sbjct: 106 WASGY 110
>AL032646-5|CAA21682.1| 1798|Caenorhabditis elegans Hypothetical
protein Y54E2A.6 protein.
Length = 1798
Score = 28.3 bits (60), Expect = 2.5
Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = -2
Query: 327 IRNPCRPVHW-SASLRILSKTKSTISFQWCSDHGHSCWPHLPYQ 199
+R R +W SA++ I+ + S +W DH C PHL ++
Sbjct: 1563 MREMARLKNWLSATMNIILLQQMCHSARWHDDHPLLCLPHLSHE 1606
>U46673-6|AAC48149.2| 1382|Caenorhabditis elegans P-glycoprotein
related protein 10 protein.
Length = 1382
Score = 27.5 bits (58), Expect = 4.4
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -1
Query: 334 VEDQESLQTGTLVSELADSVQNQIYDFFPMV 242
+E ++S ++ E ADS+ N I D PMV
Sbjct: 204 LESRQSGHVAAMLQESADSIYNGISDHLPMV 234
>U53153-8|AAC69040.1| 428|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 44 protein.
Length = 428
Score = 27.1 bits (57), Expect = 5.8
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +3
Query: 69 TFFSETGAGKHVPRAVFVDLEPTVVD 146
T ++ TG+GK++ F DL P + D
Sbjct: 136 TTYTSTGSGKNIEYITFFDLTPIIKD 161
>AY305833-1|AAR11978.1| 428|Caenorhabditis elegans nuclear receptor
NHR-44 protein.
Length = 428
Score = 27.1 bits (57), Expect = 5.8
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +3
Query: 69 TFFSETGAGKHVPRAVFVDLEPTVVD 146
T ++ TG+GK++ F DL P + D
Sbjct: 136 TTYTSTGSGKNIEYITFFDLTPIIKD 161
>AF273785-1|AAG15134.1| 423|Caenorhabditis elegans nuclear receptor
NHR-44 protein.
Length = 423
Score = 27.1 bits (57), Expect = 5.8
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +3
Query: 69 TFFSETGAGKHVPRAVFVDLEPTVVD 146
T ++ TG+GK++ F DL P + D
Sbjct: 131 TTYTSTGSGKNIEYITFFDLTPIIKD 156
>Z83230-1|CAB05741.1| 1049|Caenorhabditis elegans Hypothetical
protein F56A8.1 protein.
Length = 1049
Score = 26.6 bits (56), Expect = 7.7
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = -2
Query: 297 SASLRILSKTKSTISFQWCSDHGHSCWPHLP 205
S ++I + S +S+QW SD H+ P P
Sbjct: 358 SVFVQIWKRNNSVLSYQWNSDDFHAIEPDRP 388
>U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical
protein T19D12.1 protein.
Length = 1844
Score = 26.6 bits (56), Expect = 7.7
Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = +3
Query: 18 GQMPTDKTIGGGDDSFNTFFSE-TGAGKHVPRAVFVDLEPTVVDEVRTGT 164
GQMPTDK + S NT +S+ T A + + + P+ V V T
Sbjct: 156 GQMPTDKNVNSVITSDNTTYSDVTTAPQACDKTIIQSDCPSTVAPVTCST 205
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,243,081
Number of Sequences: 27780
Number of extensions: 201268
Number of successful extensions: 577
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 536
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 569
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 724655464
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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