Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10873
         (441 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    23   4.8  
AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.         22   8.4  
AF532982-1|AAQ10289.1|  459|Anopheles gambiae putative RNA methy...    22   8.4  

>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskeletal
            structural protein protein.
          Length = 1645

 Score = 23.0 bits (47), Expect = 4.8
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = -2

Query: 266  HLWQGHHHKH 237
            HL  GHHH H
Sbjct: 1317 HLHHGHHHHH 1326


>AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.
          Length = 679

 Score = 22.2 bits (45), Expect = 8.4
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = -2

Query: 266 HLWQGHHHKHVSLFSYGS 213
           H  Q HHH H  + + GS
Sbjct: 653 HHQQHHHHHHAEVTTAGS 670


>AF532982-1|AAQ10289.1|  459|Anopheles gambiae putative RNA
           methylase protein.
          Length = 459

 Score = 22.2 bits (45), Expect = 8.4
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = -3

Query: 199 FSRSSWLDTTEFALALTTP 143
           FSRS W D+  F   +T P
Sbjct: 293 FSRSIWADSIVFDSIITDP 311


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 415,774
Number of Sequences: 2352
Number of extensions: 8845
Number of successful extensions: 18
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 36993357
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)