Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10864
(772 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK021422-1|BAB13820.1| 577|Homo sapiens protein ( Homo sapiens ... 53 1e-06
DQ504427-1|ABF47101.1| 577|Homo sapiens DNA cross-link repair 1... 53 1e-06
BC022254-1|AAH22254.1| 434|Homo sapiens DCLRE1C protein protein. 53 1e-06
BC009185-1|AAH09185.1| 577|Homo sapiens DCLRE1C protein protein. 53 1e-06
AL360083-8|CAI40025.1| 434|Homo sapiens DNA cross-link repair 1... 53 1e-06
AL360083-7|CAI40024.1| 692|Homo sapiens DNA cross-link repair 1... 53 1e-06
AL360083-5|CAI40022.1| 577|Homo sapiens DNA cross-link repair 1... 53 1e-06
AL360083-3|CAI40020.1| 572|Homo sapiens DNA cross-link repair 1... 53 1e-06
AL360083-2|CAI40019.1| 117|Homo sapiens DNA cross-link repair 1... 53 1e-06
AJ296101-1|CAC37570.1| 692|Homo sapiens artemis protein protein. 53 1e-06
AF395752-1|AAM53260.1| 572|Homo sapiens Athabascan SCID transcr... 53 1e-06
AF395751-1|AAM53259.1| 572|Homo sapiens Athabascan SCID transcr... 53 1e-06
AF395750-1|AAM53258.1| 577|Homo sapiens Athabascan SCID transcr... 53 1e-06
AF395749-1|AAM53257.1| 577|Homo sapiens Athabascan SCID transcr... 53 1e-06
AF395748-1|AAM53256.1| 572|Homo sapiens Athabascan SCID transcr... 53 1e-06
AF395747-1|AAM53255.1| 572|Homo sapiens Athabascan SCID transcr... 53 1e-06
AL360083-4|CAI40021.1| 84|Homo sapiens DNA cross-link repair 1... 33 0.86
BC030524-1|AAH30524.1| 211|Homo sapiens CLDN19 protein protein. 33 1.5
AK096063-1|BAC04691.1| 224|Homo sapiens protein ( Homo sapiens ... 33 1.5
AF497644-1|AAQ07256.1| 211|Homo sapiens claudin-19 protein. 33 1.5
>AK021422-1|BAB13820.1| 577|Homo sapiens protein ( Homo sapiens
cDNA FLJ11360 fis, clone HEMBA1000231. ).
Length = 577
Score = 53.2 bits (122), Expect = 1e-06
Identities = 21/72 (29%), Positives = 42/72 (58%)
Frame = +3
Query: 24 INTIYLDTTFQNESFDNFPRRKDSIRMLVNHIKQWVDGEPTNRIALHTSARYGYEFVFNE 203
I ++YLDTTF + F P R++ + ++ ++ W+ P + + L+ A YGYE++F
Sbjct: 44 IQSVYLDTTFCDRRFYQIPSREECLSGVLELVRSWITRSPYHVVWLNCKAAYGYEYLFTN 103
Query: 204 IYNILNMKTYVS 239
+ L ++ +V+
Sbjct: 104 LSEELGVQVHVN 115
>DQ504427-1|ABF47101.1| 577|Homo sapiens DNA cross-link repair 1C
(PSO2 homolog, S. cerevisiae) protein.
Length = 577
Score = 52.8 bits (121), Expect = 1e-06
Identities = 21/72 (29%), Positives = 42/72 (58%)
Frame = +3
Query: 24 INTIYLDTTFQNESFDNFPRRKDSIRMLVNHIKQWVDGEPTNRIALHTSARYGYEFVFNE 203
I ++YLDTTF + F P R++ + ++ ++ W+ P + + L+ A YGYE++F
Sbjct: 44 IQSVYLDTTFCDPRFYQIPSREECLSGVLELVRSWITRSPYHVVWLNCKAAYGYEYLFTN 103
Query: 204 IYNILNMKTYVS 239
+ L ++ +V+
Sbjct: 104 LSEELGVQVHVN 115
>BC022254-1|AAH22254.1| 434|Homo sapiens DCLRE1C protein protein.
Length = 434
Score = 52.8 bits (121), Expect = 1e-06
Identities = 21/72 (29%), Positives = 42/72 (58%)
Frame = +3
Query: 24 INTIYLDTTFQNESFDNFPRRKDSIRMLVNHIKQWVDGEPTNRIALHTSARYGYEFVFNE 203
I ++YLDTTF + F P R++ + ++ ++ W+ P + + L+ A YGYE++F
Sbjct: 159 IQSVYLDTTFCDPRFYQIPSREECLSGVLELVRSWITRSPYHVVWLNCKAAYGYEYLFTN 218
Query: 204 IYNILNMKTYVS 239
+ L ++ +V+
Sbjct: 219 LSEELGVQVHVN 230
>BC009185-1|AAH09185.1| 577|Homo sapiens DCLRE1C protein protein.
Length = 577
Score = 52.8 bits (121), Expect = 1e-06
Identities = 21/72 (29%), Positives = 42/72 (58%)
Frame = +3
Query: 24 INTIYLDTTFQNESFDNFPRRKDSIRMLVNHIKQWVDGEPTNRIALHTSARYGYEFVFNE 203
I ++YLDTTF + F P R++ + ++ ++ W+ P + + L+ A YGYE++F
Sbjct: 44 IQSVYLDTTFCDPRFYQIPSREECLSGVLELVRSWITRSPYHVVWLNCKAAYGYEYLFTN 103
Query: 204 IYNILNMKTYVS 239
+ L ++ +V+
Sbjct: 104 LSEELGVQVHVN 115
>AL360083-8|CAI40025.1| 434|Homo sapiens DNA cross-link repair 1C
(PSO2 homolog, S. cerevisiae) protein.
Length = 434
Score = 52.8 bits (121), Expect = 1e-06
Identities = 21/72 (29%), Positives = 42/72 (58%)
Frame = +3
Query: 24 INTIYLDTTFQNESFDNFPRRKDSIRMLVNHIKQWVDGEPTNRIALHTSARYGYEFVFNE 203
I ++YLDTTF + F P R++ + ++ ++ W+ P + + L+ A YGYE++F
Sbjct: 159 IQSVYLDTTFCDPRFYQIPSREECLSGVLELVRSWITRSPYHVVWLNCKAAYGYEYLFTN 218
Query: 204 IYNILNMKTYVS 239
+ L ++ +V+
Sbjct: 219 LSEELGVQVHVN 230
>AL360083-7|CAI40024.1| 692|Homo sapiens DNA cross-link repair 1C
(PSO2 homolog, S. cerevisiae) protein.
Length = 692
Score = 52.8 bits (121), Expect = 1e-06
Identities = 21/72 (29%), Positives = 42/72 (58%)
Frame = +3
Query: 24 INTIYLDTTFQNESFDNFPRRKDSIRMLVNHIKQWVDGEPTNRIALHTSARYGYEFVFNE 203
I ++YLDTTF + F P R++ + ++ ++ W+ P + + L+ A YGYE++F
Sbjct: 159 IQSVYLDTTFCDPRFYQIPSREECLSGVLELVRSWITRSPYHVVWLNCKAAYGYEYLFTN 218
Query: 204 IYNILNMKTYVS 239
+ L ++ +V+
Sbjct: 219 LSEELGVQVHVN 230
>AL360083-5|CAI40022.1| 577|Homo sapiens DNA cross-link repair 1C
(PSO2 homolog, S. cerevisiae) protein.
Length = 577
Score = 52.8 bits (121), Expect = 1e-06
Identities = 21/72 (29%), Positives = 42/72 (58%)
Frame = +3
Query: 24 INTIYLDTTFQNESFDNFPRRKDSIRMLVNHIKQWVDGEPTNRIALHTSARYGYEFVFNE 203
I ++YLDTTF + F P R++ + ++ ++ W+ P + + L+ A YGYE++F
Sbjct: 44 IQSVYLDTTFCDPRFYQIPSREECLSGVLELVRSWITRSPYHVVWLNCKAAYGYEYLFTN 103
Query: 204 IYNILNMKTYVS 239
+ L ++ +V+
Sbjct: 104 LSEELGVQVHVN 115
>AL360083-3|CAI40020.1| 572|Homo sapiens DNA cross-link repair 1C
(PSO2 homolog, S. cerevisiae) protein.
Length = 572
Score = 52.8 bits (121), Expect = 1e-06
Identities = 21/72 (29%), Positives = 42/72 (58%)
Frame = +3
Query: 24 INTIYLDTTFQNESFDNFPRRKDSIRMLVNHIKQWVDGEPTNRIALHTSARYGYEFVFNE 203
I ++YLDTTF + F P R++ + ++ ++ W+ P + + L+ A YGYE++F
Sbjct: 39 IQSVYLDTTFCDPRFYQIPSREECLSGVLELVRSWITRSPYHVVWLNCKAAYGYEYLFTN 98
Query: 204 IYNILNMKTYVS 239
+ L ++ +V+
Sbjct: 99 LSEELGVQVHVN 110
>AL360083-2|CAI40019.1| 117|Homo sapiens DNA cross-link repair 1C
(PSO2 homolog, S. cerevisiae) protein.
Length = 117
Score = 52.8 bits (121), Expect = 1e-06
Identities = 21/72 (29%), Positives = 42/72 (58%)
Frame = +3
Query: 24 INTIYLDTTFQNESFDNFPRRKDSIRMLVNHIKQWVDGEPTNRIALHTSARYGYEFVFNE 203
I ++YLDTTF + F P R++ + ++ ++ W+ P + + L+ A YGYE++F
Sbjct: 13 IQSVYLDTTFCDPRFYQIPSREECLSGVLELVRSWITRSPYHVVWLNCKAAYGYEYLFTN 72
Query: 204 IYNILNMKTYVS 239
+ L ++ +V+
Sbjct: 73 LSEELGVQVHVN 84
>AJ296101-1|CAC37570.1| 692|Homo sapiens artemis protein protein.
Length = 692
Score = 52.8 bits (121), Expect = 1e-06
Identities = 21/72 (29%), Positives = 42/72 (58%)
Frame = +3
Query: 24 INTIYLDTTFQNESFDNFPRRKDSIRMLVNHIKQWVDGEPTNRIALHTSARYGYEFVFNE 203
I ++YLDTTF + F P R++ + ++ ++ W+ P + + L+ A YGYE++F
Sbjct: 159 IQSVYLDTTFCDPRFYQIPSREECLSGVLELVRSWITRSPYHVVWLNCKAAYGYEYLFTN 218
Query: 204 IYNILNMKTYVS 239
+ L ++ +V+
Sbjct: 219 LSEELGVQVHVN 230
>AF395752-1|AAM53260.1| 572|Homo sapiens Athabascan SCID transcript
variant 6 protein.
Length = 572
Score = 52.8 bits (121), Expect = 1e-06
Identities = 21/72 (29%), Positives = 42/72 (58%)
Frame = +3
Query: 24 INTIYLDTTFQNESFDNFPRRKDSIRMLVNHIKQWVDGEPTNRIALHTSARYGYEFVFNE 203
I ++YLDTTF + F P R++ + ++ ++ W+ P + + L+ A YGYE++F
Sbjct: 39 IQSVYLDTTFCDPRFYQIPSREECLSGVLELVRSWITRSPYHVVWLNCKAAYGYEYLFTN 98
Query: 204 IYNILNMKTYVS 239
+ L ++ +V+
Sbjct: 99 LSEELGVQVHVN 110
>AF395751-1|AAM53259.1| 572|Homo sapiens Athabascan SCID transcript
variant 5 protein.
Length = 572
Score = 52.8 bits (121), Expect = 1e-06
Identities = 21/72 (29%), Positives = 42/72 (58%)
Frame = +3
Query: 24 INTIYLDTTFQNESFDNFPRRKDSIRMLVNHIKQWVDGEPTNRIALHTSARYGYEFVFNE 203
I ++YLDTTF + F P R++ + ++ ++ W+ P + + L+ A YGYE++F
Sbjct: 39 IQSVYLDTTFCDPRFYQIPSREECLSGVLELVRSWITRSPYHVVWLNCKAAYGYEYLFTN 98
Query: 204 IYNILNMKTYVS 239
+ L ++ +V+
Sbjct: 99 LSEELGVQVHVN 110
>AF395750-1|AAM53258.1| 577|Homo sapiens Athabascan SCID transcript
variant 4 protein.
Length = 577
Score = 52.8 bits (121), Expect = 1e-06
Identities = 21/72 (29%), Positives = 42/72 (58%)
Frame = +3
Query: 24 INTIYLDTTFQNESFDNFPRRKDSIRMLVNHIKQWVDGEPTNRIALHTSARYGYEFVFNE 203
I ++YLDTTF + F P R++ + ++ ++ W+ P + + L+ A YGYE++F
Sbjct: 44 IQSVYLDTTFCDPRFYQIPSREECLSGVLELVRSWITRSPYHVVWLNCKAAYGYEYLFTN 103
Query: 204 IYNILNMKTYVS 239
+ L ++ +V+
Sbjct: 104 LSEELGVQVHVN 115
>AF395749-1|AAM53257.1| 577|Homo sapiens Athabascan SCID transcript
variant 3 protein.
Length = 577
Score = 52.8 bits (121), Expect = 1e-06
Identities = 21/72 (29%), Positives = 42/72 (58%)
Frame = +3
Query: 24 INTIYLDTTFQNESFDNFPRRKDSIRMLVNHIKQWVDGEPTNRIALHTSARYGYEFVFNE 203
I ++YLDTTF + F P R++ + ++ ++ W+ P + + L+ A YGYE++F
Sbjct: 44 IQSVYLDTTFCDPRFYQIPSREECLSGVLELVRSWITRSPYHVVWLNCKAAYGYEYLFTN 103
Query: 204 IYNILNMKTYVS 239
+ L ++ +V+
Sbjct: 104 LSEELGVQVHVN 115
>AF395748-1|AAM53256.1| 572|Homo sapiens Athabascan SCID transcript
variant 2 protein.
Length = 572
Score = 52.8 bits (121), Expect = 1e-06
Identities = 21/72 (29%), Positives = 42/72 (58%)
Frame = +3
Query: 24 INTIYLDTTFQNESFDNFPRRKDSIRMLVNHIKQWVDGEPTNRIALHTSARYGYEFVFNE 203
I ++YLDTTF + F P R++ + ++ ++ W+ P + + L+ A YGYE++F
Sbjct: 39 IQSVYLDTTFCDPRFYQIPSREECLSGVLELVRSWITRSPYHVVWLNCKAAYGYEYLFTN 98
Query: 204 IYNILNMKTYVS 239
+ L ++ +V+
Sbjct: 99 LSEELGVQVHVN 110
>AF395747-1|AAM53255.1| 572|Homo sapiens Athabascan SCID transcript
variant 1 protein.
Length = 572
Score = 52.8 bits (121), Expect = 1e-06
Identities = 21/72 (29%), Positives = 42/72 (58%)
Frame = +3
Query: 24 INTIYLDTTFQNESFDNFPRRKDSIRMLVNHIKQWVDGEPTNRIALHTSARYGYEFVFNE 203
I ++YLDTTF + F P R++ + ++ ++ W+ P + + L+ A YGYE++F
Sbjct: 39 IQSVYLDTTFCDPRFYQIPSREECLSGVLELVRSWITRSPYHVVWLNCKAAYGYEYLFTN 98
Query: 204 IYNILNMKTYVS 239
+ L ++ +V+
Sbjct: 99 LSEELGVQVHVN 110
>AL360083-4|CAI40021.1| 84|Homo sapiens DNA cross-link repair 1C
(PSO2 homolog, S. cerevisiae) protein.
Length = 84
Score = 33.5 bits (73), Expect = 0.86
Identities = 12/40 (30%), Positives = 23/40 (57%)
Frame = +3
Query: 24 INTIYLDTTFQNESFDNFPRRKDSIRMLVNHIKQWVDGEP 143
I ++YLDTTF + F P R++ + ++ ++ W+ P
Sbjct: 39 IQSVYLDTTFCDPRFYQIPSREECLSGVLELVRSWITRSP 78
>BC030524-1|AAH30524.1| 211|Homo sapiens CLDN19 protein protein.
Length = 211
Score = 32.7 bits (71), Expect = 1.5
Identities = 21/62 (33%), Positives = 28/62 (45%)
Frame = -3
Query: 434 CPLNGVSLLKKLHSNIFGSLCVPVNICYDQIPAIFVSHINVSSYLRCGS*SL*QMVICCT 255
C L VS L + F + PVN Y+ PA+FV + + GS +CCT
Sbjct: 132 CTLTAVSWYATLVTQEFFNPSTPVNARYEFGPALFVGWASAGLAVLGGS------FLCCT 185
Query: 254 CP 249
CP
Sbjct: 186 CP 187
>AK096063-1|BAC04691.1| 224|Homo sapiens protein ( Homo sapiens
cDNA FLJ38744 fis, clone KIDNE2012188, highly similar to
Mus musculus claudin-19 mRNA. ).
Length = 224
Score = 32.7 bits (71), Expect = 1.5
Identities = 21/62 (33%), Positives = 28/62 (45%)
Frame = -3
Query: 434 CPLNGVSLLKKLHSNIFGSLCVPVNICYDQIPAIFVSHINVSSYLRCGS*SL*QMVICCT 255
C L VS L + F + PVN Y+ PA+FV + + GS +CCT
Sbjct: 132 CTLTAVSWYATLVTQEFFNPSTPVNARYEFGPALFVGWASAGLAVLGGS------FLCCT 185
Query: 254 CP 249
CP
Sbjct: 186 CP 187
>AF497644-1|AAQ07256.1| 211|Homo sapiens claudin-19 protein.
Length = 211
Score = 32.7 bits (71), Expect = 1.5
Identities = 21/62 (33%), Positives = 28/62 (45%)
Frame = -3
Query: 434 CPLNGVSLLKKLHSNIFGSLCVPVNICYDQIPAIFVSHINVSSYLRCGS*SL*QMVICCT 255
C L VS L + F + PVN Y+ PA+FV + + GS +CCT
Sbjct: 132 CTLTAVSWYATLVTQEFFNPSTPVNARYEFGPALFVGWASAGLAVLGGS------FLCCT 185
Query: 254 CP 249
CP
Sbjct: 186 CP 187
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,089,807
Number of Sequences: 237096
Number of extensions: 2455095
Number of successful extensions: 4586
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 4401
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4583
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9311505506
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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