Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10864
         (772 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z83104-3|CAB05476.1|  295|Caenorhabditis elegans Hypothetical pr...    29   3.7  
Z66523-9|CAE17856.1|  271|Caenorhabditis elegans Hypothetical pr...    28   6.4  
U39648-3|AAM15603.1|  434|Caenorhabditis elegans Hypothetical pr...    28   6.4  
AC024811-1|AAF60776.1|  494|Caenorhabditis elegans Dnaj domain (...    28   6.4  
AF067608-13|AAK95862.1| 1634|Caenorhabditis elegans Hypothetical...    28   8.5  

>Z83104-3|CAB05476.1|  295|Caenorhabditis elegans Hypothetical
           protein F09B12.2 protein.
          Length = 295

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 14/39 (35%), Positives = 23/39 (58%)
 Frame = -3

Query: 485 RNIHI*RRLGCLRASFHCPLNGVSLLKKLHSNIFGSLCV 369
           ++ H    +  LRA  HCP+  V +L++ H   FG++CV
Sbjct: 103 KHCHSCHSMSPLRAH-HCPVCDVCILRRDHHCSFGAVCV 140


>Z66523-9|CAE17856.1|  271|Caenorhabditis elegans Hypothetical
           protein M05D6.9 protein.
          Length = 271

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 19/50 (38%), Positives = 28/50 (56%)
 Frame = -2

Query: 642 VIEFTNLHRSRWLKDVTSFRARFRYKLIPETDNLVRCKITDEKIHSSRLQ 493
           ++EFT L    W+KD T  +A+ R   +P T   V+CK  D K+ + R Q
Sbjct: 218 LLEFTRLQVDYWMKDFTK-QAKSR---VPLTCRKVQCK--DFKLANCRTQ 261


>U39648-3|AAM15603.1|  434|Caenorhabditis elegans Hypothetical
           protein T13C5.2 protein.
          Length = 434

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 11/57 (19%), Positives = 25/57 (43%)
 Frame = +3

Query: 12  MPIKINTIYLDTTFQNESFDNFPRRKDSIRMLVNHIKQWVDGEPTNRIALHTSARYG 182
           +P+   +I+ D     +         + +  L++ + +W D  P N   +H + R+G
Sbjct: 256 LPMNSLSIWRDRVISFDRVCYAEIESNDLLSLLSQVTEWFDASPLNNFLIHIANRFG 312


>AC024811-1|AAF60776.1|  494|Caenorhabditis elegans Dnaj domain
           (prokaryotic heat shockprotein) protein 28 protein.
          Length = 494

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 19/76 (25%), Positives = 34/76 (44%), Gaps = 6/76 (7%)
 Frame = +2

Query: 257 YSKLPSVKGITNHSEDTMIHLCEKRKWREFDHSKCLPEHRANQKYLN------VIFSAMR 418
           Y K+  V+   N  E T  +    +KW   +      + +A +K+++      V+ +  +
Sbjct: 381 YYKILGVRRNANKREITKAYRKMAQKWHPDNFQDEKEKKKAEKKFIDIAAAKEVLSNEEK 440

Query: 419 HRSMDNENSPLDSRDG 466
            R+ DN   PLDS  G
Sbjct: 441 RRAFDNGQDPLDSEAG 456


>AF067608-13|AAK95862.1| 1634|Caenorhabditis elegans Hypothetical
            protein B0511.12 protein.
          Length = 1634

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 3/51 (5%)
 Frame = -2

Query: 660  FIKCIIVIEFTNLHRSRWLKD---VTSFRARFRYKLIPETDNLVRCKITDE 517
            +IKCII   FT+    +WL+D    T+ R+        + D++  C   DE
Sbjct: 916  YIKCIIYYTFTSTKFRQWLRDDTVQTAIRSVIENPRYTDVDSIF-CSTNDE 965


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,703,314
Number of Sequences: 27780
Number of extensions: 431637
Number of successful extensions: 1203
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1061
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1203
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1851132448
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)