Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10863X
         (521 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z79754-10|CAB02099.1|  181|Caenorhabditis elegans Hypothetical p...    90   1e-18
AF025462-2|AAN72422.1| 1075|Caenorhabditis elegans Phospholipase...    30   1.2  
Z81103-4|CAB03210.1|  686|Caenorhabditis elegans Hypothetical pr...    28   3.5  
Z81072-15|CAB03026.2| 1262|Caenorhabditis elegans Hypothetical p...    28   3.5  
Z81048-10|CAB02845.2| 1262|Caenorhabditis elegans Hypothetical p...    28   3.5  
AY652943-1|AAT73710.1|  686|Caenorhabditis elegans guanylate cyc...    28   3.5  
AL132949-22|CAB70112.2|  603|Caenorhabditis elegans Hypothetical...    27   6.2  
U28730-7|AAA68258.2|  665|Caenorhabditis elegans Abnormal cell l...    27   8.1  
AF275253-1|AAG28037.1|  665|Caenorhabditis elegans LIN-23 protein.     27   8.1  

>Z79754-10|CAB02099.1|  181|Caenorhabditis elegans Hypothetical
           protein F25H2.11 protein.
          Length = 181

 Score = 89.8 bits (213), Expect = 1e-18
 Identities = 40/85 (47%), Positives = 59/85 (69%), Gaps = 2/85 (2%)
 Frame = +3

Query: 3   DTYKMKLVDEVIYEVTGRLVTRAQGDIQIEGFNPSAEEA--DEGTDSAVESGVDIVLNHR 176
           D++ MKLVD+++YE  G+ V R +G+I + G NPSAEE   D+G+D  VE G+DIVLNH+
Sbjct: 16  DSFPMKLVDDLVYEFKGKHVVRKEGEIVLAGSNPSAEEGAEDDGSDEHVERGIDIVLNHK 75

Query: 177 LVETYAFGDKKSYTLYLKDYMKKLV 251
           LVE   + D   +  Y+K +MK ++
Sbjct: 76  LVEMNCYEDASMFKAYIKKFMKNVI 100



 Score = 50.4 bits (115), Expect = 8e-07
 Identities = 30/88 (34%), Positives = 48/88 (54%), Gaps = 7/88 (7%)
 Frame = +2

Query: 227 QRLYEKISSKLEEKAPDQVEV--FKTNMNKVMKDILG--RFKELQFFTGESMDC---DGM 385
           ++  + +   +E+   D+ +V  FK  +   +  +L   RFK L FF GE       +G 
Sbjct: 93  KKFMKNVIDHMEKNNRDKADVDAFKKKIQGWVVSLLAKDRFKNLAFFIGERAAEGAENGQ 152

Query: 386 VAMMEYRDFDGTQIPIMMFFKHGLEEEK 469
           VA++EYRD DGT++P +M  K  + EEK
Sbjct: 153 VAIIEYRDVDGTEVPTLMLVKEAIIEEK 180


>AF025462-2|AAN72422.1| 1075|Caenorhabditis elegans Phospholipase c
           like protein 1,isoform a protein.
          Length = 1075

 Score = 29.9 bits (64), Expect = 1.2
 Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
 Frame = -2

Query: 484 IYHLEFLFF*TMFEKHHDWYLRTIKVSIFHHGNHAITIHGLPS--KELKFLKPAEDVFHY 311
           I+ L ++FF   F  H D++ +T++ SI  HG  A +  G  S  K + F     D    
Sbjct: 16  IFGLHYIFFTLYF--HMDFFGKTLRSSIIKHGGRAKSPAGTGSGRKTVSFSSKNSDAKIS 73

Query: 310 FVHVCFKY 287
            V  C+ Y
Sbjct: 74  NVSDCWNY 81


>Z81103-4|CAB03210.1|  686|Caenorhabditis elegans Hypothetical
           protein M04G12.3 protein.
          Length = 686

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 20/79 (25%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
 Frame = +2

Query: 164 PEPQASRNIRLR*QEILHIVPQRLYEKISSKLEEKAPDQVEVFKTNMNKVMKDILGRFKE 343
           P   A+R++ L  Q+ L  V   L  + +++  E    ++EV +   + ++KD+L R   
Sbjct: 379 PLHDATRDLILLNQQRLSDVEVNLQLEANNEQLETMTHELEVERQKTDSILKDMLPRKIA 438

Query: 344 LQFFTGESMD-CDGMVAMM 397
            Q  +GE ++ C+    +M
Sbjct: 439 KQLLSGEHLEPCEYEATVM 457


>Z81072-15|CAB03026.2| 1262|Caenorhabditis elegans Hypothetical
            protein F30A10.10 protein.
          Length = 1262

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 15/27 (55%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
 Frame = +3

Query: 96   FNPSAEEADEGTDSAVESG-VDIVLNH 173
            F+PSA +ADE  D A E G VD  L H
Sbjct: 1236 FSPSASQADETGDRAPERGFVDTALAH 1262


>Z81048-10|CAB02845.2| 1262|Caenorhabditis elegans Hypothetical
            protein F30A10.10 protein.
          Length = 1262

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 15/27 (55%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
 Frame = +3

Query: 96   FNPSAEEADEGTDSAVESG-VDIVLNH 173
            F+PSA +ADE  D A E G VD  L H
Sbjct: 1236 FSPSASQADETGDRAPERGFVDTALAH 1262


>AY652943-1|AAT73710.1|  686|Caenorhabditis elegans guanylate
           cyclase-like protein protein.
          Length = 686

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 20/79 (25%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
 Frame = +2

Query: 164 PEPQASRNIRLR*QEILHIVPQRLYEKISSKLEEKAPDQVEVFKTNMNKVMKDILGRFKE 343
           P   A+R++ L  Q+ L  V   L  + +++  E    ++EV +   + ++KD+L R   
Sbjct: 379 PLHDATRDLILLNQQRLSDVEVNLQLEANNEQLETMTHELEVERQKTDSILKDMLPRKIA 438

Query: 344 LQFFTGESMD-CDGMVAMM 397
            Q  +GE ++ C+    +M
Sbjct: 439 KQLLSGEHLEPCEYEATVM 457


>AL132949-22|CAB70112.2|  603|Caenorhabditis elegans Hypothetical
           protein Y53F4B.25 protein.
          Length = 603

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 13/41 (31%), Positives = 22/41 (53%)
 Frame = +2

Query: 224 PQRLYEKISSKLEEKAPDQVEVFKTNMNKVMKDILGRFKEL 346
           PQ+ +  I  K  E+  + V+V    MN + K ++ R KE+
Sbjct: 394 PQQFFRSIPEKTSEQLRNFVKVHPQVMNNLQKPLIYRGKEM 434


>U28730-7|AAA68258.2|  665|Caenorhabditis elegans Abnormal cell
           lineage protein 23 protein.
          Length = 665

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 16/51 (31%), Positives = 23/51 (45%)
 Frame = -1

Query: 158 VNSALDGRVRALVSLFSRRIKTLDLDITLCSRHQPTGHFVNNFIDQFHFVS 6
           V+ A DG+++      +   + L  +I LCS  Q TG       D F  VS
Sbjct: 439 VSGAYDGKIKVWDLQAALDPRALSSEICLCSLVQHTGRVFRLQFDDFQIVS 489


>AF275253-1|AAG28037.1|  665|Caenorhabditis elegans LIN-23 protein.
          Length = 665

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 16/51 (31%), Positives = 23/51 (45%)
 Frame = -1

Query: 158 VNSALDGRVRALVSLFSRRIKTLDLDITLCSRHQPTGHFVNNFIDQFHFVS 6
           V+ A DG+++      +   + L  +I LCS  Q TG       D F  VS
Sbjct: 439 VSGAYDGKIKVWDLQAALDPRALSSEICLCSLVQHTGRVFRLQFDDFQIVS 489


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,270,372
Number of Sequences: 27780
Number of extensions: 218899
Number of successful extensions: 641
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 622
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 640
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)