Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10861
(567 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF039043-1|AAB94194.1| 5105|Caenorhabditis elegans Hypothetical ... 30 1.3
Z66520-11|CAA91383.1| 269|Caenorhabditis elegans Hypothetical p... 29 1.8
Z80216-11|CAN99667.1| 984|Caenorhabditis elegans Hypothetical p... 29 2.3
Z80216-10|CAB02286.4| 949|Caenorhabditis elegans Hypothetical p... 29 2.3
AL023823-2|CAN99714.1| 984|Caenorhabditis elegans Hypothetical ... 29 2.3
AL023823-1|CAA19441.4| 949|Caenorhabditis elegans Hypothetical ... 29 2.3
AF139520-1|AAD33830.1| 176|Caenorhabditis elegans warthog prote... 29 3.1
AF000298-2|AAC48258.1| 176|Caenorhabditis elegans Warthog (hedg... 29 3.1
Z68132-1|CAA92221.2| 374|Caenorhabditis elegans Hypothetical pr... 27 9.4
U23520-5|AAC46554.4| 975|Caenorhabditis elegans Mammalian vav (... 27 9.4
U23520-4|ABB88236.1| 1007|Caenorhabditis elegans Mammalian vav (... 27 9.4
DQ136172-1|AAZ66767.1| 1007|Caenorhabditis elegans VAV-1 protein. 27 9.4
>AF039043-1|AAB94194.1| 5105|Caenorhabditis elegans Hypothetical
protein F39C12.1 protein.
Length = 5105
Score = 29.9 bits (64), Expect = 1.3
Identities = 22/61 (36%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Frame = +2
Query: 2 QQERTKTIKNEIDHRCSSRPCGYRHRCPPY-RGLP*DRSV*IRRQPRWSLQLQFRDFQRH 178
Q ER K +KN++ +R SSR G H+ P + R LP D R+ R + Q +F+ +
Sbjct: 2525 QLER-KFLKNKVHNRRSSRAPGIHHQRPLHPRWLPTDHET-DRKDSRAASQFRFQHMRSK 2582
Query: 179 R 181
R
Sbjct: 2583 R 2583
>Z66520-11|CAA91383.1| 269|Caenorhabditis elegans Hypothetical
protein F49E12.9a protein.
Length = 269
Score = 29.5 bits (63), Expect = 1.8
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = -2
Query: 440 WIFATQSCIKASLLKSIQGI*KFSSWRRRPEE*IHPE 330
WI T S + KSI+G + SW +P + IHPE
Sbjct: 232 WIHGTDSTFR----KSIEGKRNYMSWSMKPIKQIHPE 264
>Z80216-11|CAN99667.1| 984|Caenorhabditis elegans Hypothetical
protein F10G8.8b protein.
Length = 984
Score = 29.1 bits (62), Expect = 2.3
Identities = 28/101 (27%), Positives = 49/101 (48%), Gaps = 6/101 (5%)
Frame = +3
Query: 111 VRSEFDASPDGAYNYNFETSNGIVRTNTGELKEALDDDNKPHVIVAVREATVTR---TLT 281
+R++ DA+ D + + N ++ LK + D+ ++ V +++ T+T
Sbjct: 548 LRTQLDAAKDDSARRKRDAINQEIKELRITLKSSEDELHRYRKEVDTLRRQISQNSQTVT 607
Query: 282 ---ANLKPLRTSLTRLDTMLRVNLFLRSPPPRAKLLNSLDR 395
A L LRT L+ L ++LR +LFL + L N LDR
Sbjct: 608 LQRAVLSTLRTQLSALSSLLRSSLFLGAVDLFDSLDNILDR 648
>Z80216-10|CAB02286.4| 949|Caenorhabditis elegans Hypothetical
protein F10G8.8a protein.
Length = 949
Score = 29.1 bits (62), Expect = 2.3
Identities = 28/101 (27%), Positives = 49/101 (48%), Gaps = 6/101 (5%)
Frame = +3
Query: 111 VRSEFDASPDGAYNYNFETSNGIVRTNTGELKEALDDDNKPHVIVAVREATVTR---TLT 281
+R++ DA+ D + + N ++ LK + D+ ++ V +++ T+T
Sbjct: 548 LRTQLDAAKDDSARRKRDAINQEIKELRITLKSSEDELHRYRKEVDTLRRQISQNSQTVT 607
Query: 282 ---ANLKPLRTSLTRLDTMLRVNLFLRSPPPRAKLLNSLDR 395
A L LRT L+ L ++LR +LFL + L N LDR
Sbjct: 608 LQRAVLSTLRTQLSALSSLLRSSLFLGAVDLFDSLDNILDR 648
>AL023823-2|CAN99714.1| 984|Caenorhabditis elegans Hypothetical
protein F10G8.8b protein.
Length = 984
Score = 29.1 bits (62), Expect = 2.3
Identities = 28/101 (27%), Positives = 49/101 (48%), Gaps = 6/101 (5%)
Frame = +3
Query: 111 VRSEFDASPDGAYNYNFETSNGIVRTNTGELKEALDDDNKPHVIVAVREATVTR---TLT 281
+R++ DA+ D + + N ++ LK + D+ ++ V +++ T+T
Sbjct: 548 LRTQLDAAKDDSARRKRDAINQEIKELRITLKSSEDELHRYRKEVDTLRRQISQNSQTVT 607
Query: 282 ---ANLKPLRTSLTRLDTMLRVNLFLRSPPPRAKLLNSLDR 395
A L LRT L+ L ++LR +LFL + L N LDR
Sbjct: 608 LQRAVLSTLRTQLSALSSLLRSSLFLGAVDLFDSLDNILDR 648
>AL023823-1|CAA19441.4| 949|Caenorhabditis elegans Hypothetical
protein F10G8.8a protein.
Length = 949
Score = 29.1 bits (62), Expect = 2.3
Identities = 28/101 (27%), Positives = 49/101 (48%), Gaps = 6/101 (5%)
Frame = +3
Query: 111 VRSEFDASPDGAYNYNFETSNGIVRTNTGELKEALDDDNKPHVIVAVREATVTR---TLT 281
+R++ DA+ D + + N ++ LK + D+ ++ V +++ T+T
Sbjct: 548 LRTQLDAAKDDSARRKRDAINQEIKELRITLKSSEDELHRYRKEVDTLRRQISQNSQTVT 607
Query: 282 ---ANLKPLRTSLTRLDTMLRVNLFLRSPPPRAKLLNSLDR 395
A L LRT L+ L ++LR +LFL + L N LDR
Sbjct: 608 LQRAVLSTLRTQLSALSSLLRSSLFLGAVDLFDSLDNILDR 648
>AF139520-1|AAD33830.1| 176|Caenorhabditis elegans warthog protein
WRT-5 protein.
Length = 176
Score = 28.7 bits (61), Expect = 3.1
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = -1
Query: 207 PSAHQCSYARCRWKSRNCSCKLHRGWRRIQTERS*GS 97
PS H+ YA C ++ + +C + W T+ S GS
Sbjct: 48 PSCHEKKYAECPERATSTTCSTNSSWVGGVTQHSDGS 84
>AF000298-2|AAC48258.1| 176|Caenorhabditis elegans Warthog
(hedgehog-like family)protein 5, isoform a protein.
Length = 176
Score = 28.7 bits (61), Expect = 3.1
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = -1
Query: 207 PSAHQCSYARCRWKSRNCSCKLHRGWRRIQTERS*GS 97
PS H+ YA C ++ + +C + W T+ S GS
Sbjct: 48 PSCHEKKYAECPERATSTTCSTNSSWVGGVTQHSDGS 84
>Z68132-1|CAA92221.2| 374|Caenorhabditis elegans Hypothetical
protein F09C8.1 protein.
Length = 374
Score = 27.1 bits (57), Expect = 9.4
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +2
Query: 425 VWRRSTTFSCYSLLI*CSLPYFFVRFFLYLWCFQYVMHKDNKV 553
+WRR FSC L + +LP F + + C VM K KV
Sbjct: 1 MWRRVFVFSCIFLYVLATLPDFGIPGYS---CDANVMKKSKKV 40
>U23520-5|AAC46554.4| 975|Caenorhabditis elegans Mammalian vav
(oncogene) relatedprotein 1, isoform a protein.
Length = 975
Score = 27.1 bits (57), Expect = 9.4
Identities = 18/77 (23%), Positives = 35/77 (45%), Gaps = 2/77 (2%)
Frame = -2
Query: 257 FTHSNNNVRLVVVVESLLQ--LTSVRTHDAVGSLEIVVVSSIGAGVEFRPNDLRVVLCRG 84
+ SNN + + +++ L+ + + AV + ++ G + F+ D+ V+L
Sbjct: 872 YYRSNNLIEIFAALDTCLKNPYSQCKVFKAVHDYDAPSPNNEGKFLSFKTGDIVVLLDTV 931
Query: 83 GSDDGSHKGESYNDDQF 33
G D G KG+ N F
Sbjct: 932 GEDRGWWKGQVNNKSGF 948
>U23520-4|ABB88236.1| 1007|Caenorhabditis elegans Mammalian vav
(oncogene) relatedprotein 1, isoform b protein.
Length = 1007
Score = 27.1 bits (57), Expect = 9.4
Identities = 18/77 (23%), Positives = 35/77 (45%), Gaps = 2/77 (2%)
Frame = -2
Query: 257 FTHSNNNVRLVVVVESLLQ--LTSVRTHDAVGSLEIVVVSSIGAGVEFRPNDLRVVLCRG 84
+ SNN + + +++ L+ + + AV + ++ G + F+ D+ V+L
Sbjct: 904 YYRSNNLIEIFAALDTCLKNPYSQCKVFKAVHDYDAPSPNNEGKFLSFKTGDIVVLLDTV 963
Query: 83 GSDDGSHKGESYNDDQF 33
G D G KG+ N F
Sbjct: 964 GEDRGWWKGQVNNKSGF 980
>DQ136172-1|AAZ66767.1| 1007|Caenorhabditis elegans VAV-1 protein.
Length = 1007
Score = 27.1 bits (57), Expect = 9.4
Identities = 18/77 (23%), Positives = 35/77 (45%), Gaps = 2/77 (2%)
Frame = -2
Query: 257 FTHSNNNVRLVVVVESLLQ--LTSVRTHDAVGSLEIVVVSSIGAGVEFRPNDLRVVLCRG 84
+ SNN + + +++ L+ + + AV + ++ G + F+ D+ V+L
Sbjct: 904 YYRSNNLIEIFAALDTCLKNPYSQCKVFKAVHDYDAPSPNNEGKFLSFKTGDIVVLLDTV 963
Query: 83 GSDDGSHKGESYNDDQF 33
G D G KG+ N F
Sbjct: 964 GEDRGWWKGQVNNKSGF 980
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,035,200
Number of Sequences: 27780
Number of extensions: 230863
Number of successful extensions: 701
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 661
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 701
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1176726318
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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