Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10860
(806 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
U09586-3|AAC47272.1| 470|Tribolium castaneum integrase protein. 23 2.2
AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein. 23 2.2
AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein. 23 2.2
AY884061-1|AAX84202.1| 717|Tribolium castaneum laccase 2A protein. 22 5.0
AY584475-1|AAS93634.1| 209|Tribolium castaneum homothorax protein. 22 5.0
AJ876407-1|CAI45288.1| 590|Tribolium castaneum phosphatase prot... 22 5.0
AJ518941-1|CAD57735.1| 456|Tribolium castaneum homothorax protein. 22 5.0
DQ414247-1|ABD63009.2| 414|Tribolium castaneum paired protein. 22 6.6
EU019710-1|ABU25222.1| 475|Tribolium castaneum dopa decarboxyla... 21 8.7
AF017415-2|AAB70263.1| 284|Tribolium castaneum abdominal-A prot... 21 8.7
AF017415-1|AAB70262.1| 343|Tribolium castaneum abdominal-AII pr... 21 8.7
AF017414-2|AAB70261.1| 150|Tribolium castaneum abdominal-A prot... 21 8.7
AF017414-1|AAB70260.1| 209|Tribolium castaneum abdominal-AII pr... 21 8.7
>U09586-3|AAC47272.1| 470|Tribolium castaneum integrase protein.
Length = 470
Score = 23.4 bits (48), Expect = 2.2
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = +1
Query: 697 SQTWFDSRRAKIDDPVLSSIAQNTGRP 777
S TW +S RA P LSSI P
Sbjct: 270 SNTWQNSLRAADIQPTLSSIRHPESNP 296
Score = 21.8 bits (44), Expect = 6.6
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +1
Query: 700 QTWFDSRRAKIDDPVLSSIAQN 765
Q D ++ + DDPVLS I N
Sbjct: 63 QLMSDLKQHQSDDPVLSQIIAN 84
>AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein.
Length = 790
Score = 23.4 bits (48), Expect = 2.2
Identities = 13/45 (28%), Positives = 20/45 (44%)
Frame = -3
Query: 585 GLIVPSFSTLSNCCLLKLDSPMPLTIPFAEHLPILARSP*SPRPN 451
G+++PS ST + + SP L P H + P P P+
Sbjct: 698 GMVLPSPSTSVASPSVSVASPYMLQSPLTPHEAFDVKLPPPPHPH 742
>AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein.
Length = 682
Score = 23.4 bits (48), Expect = 2.2
Identities = 13/45 (28%), Positives = 20/45 (44%)
Frame = -3
Query: 585 GLIVPSFSTLSNCCLLKLDSPMPLTIPFAEHLPILARSP*SPRPN 451
G+++PS ST + + SP L P H + P P P+
Sbjct: 590 GMVLPSPSTSVASPSVSVASPYMLQSPLTPHEAFDVKLPPPPHPH 634
>AY884061-1|AAX84202.1| 717|Tribolium castaneum laccase 2A protein.
Length = 717
Score = 22.2 bits (45), Expect = 5.0
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = -3
Query: 456 PNDYNRHLI 430
PN YNRHL+
Sbjct: 509 PNTYNRHLV 517
>AY584475-1|AAS93634.1| 209|Tribolium castaneum homothorax protein.
Length = 209
Score = 22.2 bits (45), Expect = 5.0
Identities = 7/13 (53%), Positives = 11/13 (84%)
Frame = -2
Query: 355 ATSVLRCWVFHNL 317
AT++LR W+F +L
Sbjct: 189 ATNILRAWLFQHL 201
>AJ876407-1|CAI45288.1| 590|Tribolium castaneum phosphatase
protein.
Length = 590
Score = 22.2 bits (45), Expect = 5.0
Identities = 9/14 (64%), Positives = 12/14 (85%)
Frame = -1
Query: 665 LQHLQTDKIPPFLS 624
L++L+TD IP FLS
Sbjct: 200 LEYLKTDLIPMFLS 213
>AJ518941-1|CAD57735.1| 456|Tribolium castaneum homothorax protein.
Length = 456
Score = 22.2 bits (45), Expect = 5.0
Identities = 7/13 (53%), Positives = 11/13 (84%)
Frame = -2
Query: 355 ATSVLRCWVFHNL 317
AT++LR W+F +L
Sbjct: 345 ATNILRAWLFQHL 357
>DQ414247-1|ABD63009.2| 414|Tribolium castaneum paired protein.
Length = 414
Score = 21.8 bits (44), Expect = 6.6
Identities = 7/18 (38%), Positives = 12/18 (66%)
Frame = +1
Query: 700 QTWFDSRRAKIDDPVLSS 753
Q WF +RRA++ + S+
Sbjct: 265 QVWFSNRRARLRKQITSA 282
>EU019710-1|ABU25222.1| 475|Tribolium castaneum dopa decarboxylase
protein.
Length = 475
Score = 21.4 bits (43), Expect = 8.7
Identities = 10/29 (34%), Positives = 13/29 (44%)
Frame = +3
Query: 405 LYLMHWPIGLNADYSHSDVDFMETWRGLE 491
LYL H G DY H + +R L+
Sbjct: 331 LYLKHEQQGAAPDYRHWQIPLGRRFRALK 359
>AF017415-2|AAB70263.1| 284|Tribolium castaneum abdominal-A
protein.
Length = 284
Score = 21.4 bits (43), Expect = 8.7
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = -3
Query: 591 ASGLIVPSFSTLSNCCL 541
ASG +VPSFS+ ++ L
Sbjct: 23 ASGSMVPSFSSTASSAL 39
>AF017415-1|AAB70262.1| 343|Tribolium castaneum abdominal-AII
protein.
Length = 343
Score = 21.4 bits (43), Expect = 8.7
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = -3
Query: 591 ASGLIVPSFSTLSNCCL 541
ASG +VPSFS+ ++ L
Sbjct: 82 ASGSMVPSFSSTASSAL 98
>AF017414-2|AAB70261.1| 150|Tribolium castaneum abdominal-A
protein.
Length = 150
Score = 21.4 bits (43), Expect = 8.7
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = -3
Query: 591 ASGLIVPSFSTLSNCCL 541
ASG +VPSFS+ ++ L
Sbjct: 23 ASGSMVPSFSSTASSAL 39
>AF017414-1|AAB70260.1| 209|Tribolium castaneum abdominal-AII
protein.
Length = 209
Score = 21.4 bits (43), Expect = 8.7
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = -3
Query: 591 ASGLIVPSFSTLSNCCL 541
ASG +VPSFS+ ++ L
Sbjct: 82 ASGSMVPSFSSTASSAL 98
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 197,855
Number of Sequences: 336
Number of extensions: 4363
Number of successful extensions: 17
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21999028
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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