Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10860
(806 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_34622| Best HMM Match : No HMM Matches (HMM E-Value=.) 73 2e-13
SB_7528| Best HMM Match : Aldo_ket_red (HMM E-Value=0) 64 2e-10
SB_54717| Best HMM Match : Aldo_ket_red (HMM E-Value=0) 54 2e-07
SB_56309| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 1e-06
SB_8916| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.001
SB_33699| Best HMM Match : Aldo_ket_red (HMM E-Value=3.1) 34 0.16
SB_55921| Best HMM Match : Aldo_ket_red (HMM E-Value=0.16) 33 0.21
SB_55808| Best HMM Match : Pentaxin (HMM E-Value=1.2e-08) 31 1.5
SB_21696| Best HMM Match : Pentaxin (HMM E-Value=0.051) 31 1.5
SB_44114| Best HMM Match : RRM_1 (HMM E-Value=9.9e-35) 29 3.4
SB_2236| Best HMM Match : PkinA_anch (HMM E-Value=3.3) 29 4.4
SB_40691| Best HMM Match : Peptidase_C27 (HMM E-Value=1.1) 29 5.9
SB_1031| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.9
SB_55337| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.7
SB_21688| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.7
SB_9275| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.7
>SB_34622| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 340
Score = 73.3 bits (172), Expect = 2e-13
Identities = 30/48 (62%), Positives = 39/48 (81%)
Frame = +3
Query: 285 VVKREDIFITTKLWNTQHRRTEVAQAINDSLKKLGLDYIDLYLMHWPI 428
VV+R+D+FIT+KLWNT+H +V DSLK LGLDY+DLYL+HWP+
Sbjct: 65 VVERKDLFITSKLWNTKHNPKDVRSNCVDSLKDLGLDYLDLYLIHWPL 112
Score = 53.6 bits (123), Expect = 2e-07
Identities = 25/63 (39%), Positives = 38/63 (60%)
Frame = +2
Query: 506 GIVKGIGLSNFNKQQLERVLKEGTIKPDAIQIEVHLQNVQKEMVEFCQSEGVVVMGYSPF 685
G+VK IGLSNFN +Q++ + IKP A Q+E H Q ++++ + + + YSP
Sbjct: 150 GLVKAIGLSNFNSKQVDDICAIARIKPVANQVECHPLLNQAKLIDHHKKHNIQTIAYSPL 209
Query: 686 GSL 694
GSL
Sbjct: 210 GSL 212
Score = 52.4 bits (120), Expect = 4e-07
Identities = 27/62 (43%), Positives = 37/62 (59%)
Frame = +1
Query: 70 SLKMNNGRDMPAIGLGTYLGFDQNGVVKSKDKQLRDVVMRAIDVGYRHFDTASVYETEQE 249
++K+NNG +MP +GLGT+ KSK Q+ + V AI GYRH D A Y E+E
Sbjct: 3 TVKLNNGLEMPVLGLGTW---------KSKPGQVENAVKFAIKEGYRHIDCAYAYRNEKE 53
Query: 250 IG 255
+G
Sbjct: 54 VG 55
>SB_7528| Best HMM Match : Aldo_ket_red (HMM E-Value=0)
Length = 407
Score = 63.7 bits (148), Expect = 2e-10
Identities = 28/58 (48%), Positives = 39/58 (67%)
Frame = +3
Query: 255 EAVKMKIEEGVVKREDIFITTKLWNTQHRRTEVAQAINDSLKKLGLDYIDLYLMHWPI 428
EA+ + EG VKRE++F+T+KLW H +V A +LK L LDY+DLYL+H P+
Sbjct: 96 EALSEVLTEGKVKREELFVTSKLWCDSHHPDDVLPACQATLKNLQLDYLDLYLIHIPV 153
Score = 48.8 bits (111), Expect = 5e-06
Identities = 21/53 (39%), Positives = 36/53 (67%)
Frame = +2
Query: 500 ANGIVKGIGLSNFNKQQLERVLKEGTIKPDAIQIEVHLQNVQKEMVEFCQSEG 658
A G+ K IG+SNF+ ++L ++L+ +I P Q+E+H Q+++ EFC S+G
Sbjct: 189 AKGLCKAIGVSNFSVKRLNKLLETASIVPACNQVELHPYLPQEKLKEFCDSKG 241
Score = 36.7 bits (81), Expect = 0.022
Identities = 15/36 (41%), Positives = 24/36 (66%)
Frame = +1
Query: 151 KSKDKQLRDVVMRAIDVGYRHFDTASVYETEQEIGK 258
+S +++ + V AI++GYRH D A +Y E EIG+
Sbjct: 61 QSSKEEVGNAVRLAIELGYRHIDCAEIYGNEGEIGE 96
>SB_54717| Best HMM Match : Aldo_ket_red (HMM E-Value=0)
Length = 333
Score = 53.6 bits (123), Expect = 2e-07
Identities = 30/104 (28%), Positives = 52/104 (50%), Gaps = 2/104 (1%)
Frame = +2
Query: 377 EETRSGLYRSLFDALAHWIKCRL*SFG--RGLHGDLARIGRCSANGIVKGIGLSNFNKQQ 550
+ET Y+SL ++ L F G+ G + + G+++ IG+SNFN Q
Sbjct: 143 KETMDAFYKSLTRLGLGYVDLYLIHFPVPSGVVGSWQAMIDLRSRGLIRSIGVSNFNIQH 202
Query: 551 LERVLKEGTIKPDAIQIEVHLQNVQKEMVEFCQSEGVVVMGYSP 682
LE + ++ + P QIEVH KE+ ++C+ + + +SP
Sbjct: 203 LEALRQQTGVVPAVNQIEVHPFLQMKELTQYCKRHNITIQAFSP 246
Score = 49.6 bits (113), Expect = 3e-06
Identities = 20/47 (42%), Positives = 32/47 (68%)
Frame = +3
Query: 288 VKREDIFITTKLWNTQHRRTEVAQAINDSLKKLGLDYIDLYLMHWPI 428
+ R +I++ TK++ T+H E A SL +LGL Y+DLYL+H+P+
Sbjct: 124 IPRCEIYVVTKVYFTEHGYKETMDAFYKSLTRLGLGYVDLYLIHFPV 170
Score = 38.7 bits (86), Expect = 0.005
Identities = 22/60 (36%), Positives = 32/60 (53%)
Frame = +1
Query: 79 MNNGRDMPAIGLGTYLGFDQNGVVKSKDKQLRDVVMRAIDVGYRHFDTASVYETEQEIGK 258
MN+GR +P +GLG + D + V+ A++ GYR DTAS Y EQ +G+
Sbjct: 70 MNDGRKIPLLGLGAH------------DIHSKQAVLWALESGYRLIDTASRYHNEQSVGE 117
>SB_56309| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 394
Score = 50.8 bits (116), Expect = 1e-06
Identities = 21/59 (35%), Positives = 36/59 (61%)
Frame = +2
Query: 506 GIVKGIGLSNFNKQQLERVLKEGTIKPDAIQIEVHLQNVQKEMVEFCQSEGVVVMGYSP 682
G+++ +G+SNF LE + K G P QIE++ Q+E++++C G+ V GY+P
Sbjct: 146 GLIRSVGVSNFGVHHLEELRKAGCRTPAINQIEINPFWRQEEIIKYCNKHGITVEGYAP 204
Score = 48.0 bits (109), Expect = 9e-06
Identities = 19/51 (37%), Positives = 34/51 (66%)
Frame = +3
Query: 273 IEEGVVKREDIFITTKLWNTQHRRTEVAQAINDSLKKLGLDYIDLYLMHWP 425
+ + +KREDI++TTKL ++ + + +S+KKL + Y+DL+L+H P
Sbjct: 77 VRKSGLKREDIYVTTKLKPSEEGHSNALKYAKESIKKLDIGYVDLFLIHTP 127
Score = 33.5 bits (73), Expect = 0.21
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = +1
Query: 175 DVVMRAIDVGYRHFDTASVYETEQEIG 255
DV + A+ GYR DTA +Y+ E+E+G
Sbjct: 48 DVCLFALKNGYRMLDTADIYQNEKEVG 74
>SB_8916| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 619
Score = 41.1 bits (92), Expect = 0.001
Identities = 26/91 (28%), Positives = 43/91 (47%), Gaps = 4/91 (4%)
Frame = +3
Query: 261 VKMKIEEGVVKREDIFITTKLWNTQHRRTEVAQAINDSLKKLGLDYIDLYLMHW----PI 428
V I + + R+DIFI TKL +++ SL+ L DYIDL+L+H
Sbjct: 379 VAKAIADSGIPRKDIFIITKLHPRYLGYEPTLKSVEMSLRALSTDYIDLFLIHSKTCDDF 438
Query: 429 GLNADYSHSDVDFMETWRGLEDAQRMG*LKA 521
L + E+W+ +E+ R G +++
Sbjct: 439 LLTCAEGEPRGTWKESWKAMEELHRQGKIRS 469
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/62 (27%), Positives = 33/62 (53%)
Frame = +2
Query: 506 GIVKGIGLSNFNKQQLERVLKEGTIKPDAIQIEVHLQNVQKEMVEFCQSEGVVVMGYSPF 685
G ++ +G+SNFN +L+ ++ T+ A+Q + ++ FC G+ +GYS
Sbjct: 465 GKIRSLGVSNFNVDELQELVNFATVPVSAVQNWFDPFHQDRKARRFCNKHGIRYIGYSTL 524
Query: 686 GS 691
G+
Sbjct: 525 GT 526
>SB_33699| Best HMM Match : Aldo_ket_red (HMM E-Value=3.1)
Length = 93
Score = 33.9 bits (74), Expect = 0.16
Identities = 18/60 (30%), Positives = 31/60 (51%)
Frame = +1
Query: 79 MNNGRDMPAIGLGTYLGFDQNGVVKSKDKQLRDVVMRAIDVGYRHFDTASVYETEQEIGK 258
+++G +P GLG Y +K + V+ A++ GYR DTA+ Y E+ +G+
Sbjct: 3 LSDGYKIPRFGLGLY---------DLDEKHTKQAVLWALENGYRMIDTAASYNNEKRVGE 53
>SB_55921| Best HMM Match : Aldo_ket_red (HMM E-Value=0.16)
Length = 195
Score = 33.5 bits (73), Expect = 0.21
Identities = 12/17 (70%), Positives = 16/17 (94%)
Frame = +3
Query: 372 SLKKLGLDYIDLYLMHW 422
SL++LG+D IDLYL+HW
Sbjct: 51 SLERLGIDRIDLYLLHW 67
>SB_55808| Best HMM Match : Pentaxin (HMM E-Value=1.2e-08)
Length = 574
Score = 30.7 bits (66), Expect = 1.5
Identities = 16/48 (33%), Positives = 25/48 (52%)
Frame = +1
Query: 631 NGGILSV*RCCSHGLFSFRFLGSQTWFDSRRAKIDDPVLSSIAQNTGR 774
N GI+ R G + FLG T FD RA++ V+ ++++ GR
Sbjct: 179 NSGIIGAKRISFEGPVTSVFLGEITGFDMWRAELAPEVIDTLSRGPGR 226
>SB_21696| Best HMM Match : Pentaxin (HMM E-Value=0.051)
Length = 312
Score = 30.7 bits (66), Expect = 1.5
Identities = 16/48 (33%), Positives = 25/48 (52%)
Frame = +1
Query: 631 NGGILSV*RCCSHGLFSFRFLGSQTWFDSRRAKIDDPVLSSIAQNTGR 774
N GI+ R G + FLG T FD RA++ V+ ++++ GR
Sbjct: 58 NSGIIGAKRISFEGPVTSVFLGEITGFDMWRAELAPEVIDTLSRGPGR 105
>SB_44114| Best HMM Match : RRM_1 (HMM E-Value=9.9e-35)
Length = 929
Score = 29.5 bits (63), Expect = 3.4
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +2
Query: 209 VISTPPPFTKLNKKLGSREDEDRGRSRQKR 298
+ S PPPF K KK ++E+ R R ++KR
Sbjct: 889 IFSVPPPFRK-KKKEEAKEERQRQRQKKKR 917
>SB_2236| Best HMM Match : PkinA_anch (HMM E-Value=3.3)
Length = 331
Score = 29.1 bits (62), Expect = 4.4
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = -3
Query: 783 EEWSS-RILGDGAEHWIVDLGPSTVEPCLATKEPKGE*PMTTTP 655
++W+S R L + EH + S +PC+A +E KG +T P
Sbjct: 122 KKWASMRELAENCEHIEISGDHSGAQPCVAAQEGKGATVITLEP 165
>SB_40691| Best HMM Match : Peptidase_C27 (HMM E-Value=1.1)
Length = 406
Score = 28.7 bits (61), Expect = 5.9
Identities = 10/27 (37%), Positives = 20/27 (74%)
Frame = -1
Query: 101 GMSLPLFIFNEGTSIVDASPSPHRDST 21
G+ L + +F+ TSI+++ P+P+R+ T
Sbjct: 234 GVGLEIKVFSSCTSILNSKPNPYREKT 260
>SB_1031| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1933
Score = 28.7 bits (61), Expect = 5.9
Identities = 19/63 (30%), Positives = 32/63 (50%)
Frame = +2
Query: 473 DLARIGRCSANGIVKGIGLSNFNKQQLERVLKEGTIKPDAIQIEVHLQNVQKEMVEFCQS 652
D R+ C ANG S+ Q+ E +++ +K DA+QI HL ++ CQ+
Sbjct: 175 DDIRLYSCLANG-------SSEEFQRAEHLVRAKAVK-DALQIGFHLSATVNQLQSVCQT 226
Query: 653 EGV 661
+G+
Sbjct: 227 KGM 229
>SB_55337| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1853
Score = 28.3 bits (60), Expect = 7.7
Identities = 15/37 (40%), Positives = 18/37 (48%)
Frame = +2
Query: 671 GYSPFGSLVARHGSTVEGPRSTIQCSAPSPRIREDHS 781
GYS FG + RH TV PR C P + E +S
Sbjct: 1569 GYSDFGFFLTRHSQTVRVPR----CPEDRPPLWEGYS 1601
>SB_21688| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1078
Score = 28.3 bits (60), Expect = 7.7
Identities = 18/56 (32%), Positives = 25/56 (44%)
Frame = +2
Query: 638 EFCQSEGVVVMGYSPFGSLVARHGSTVEGPRSTIQCSAPSPRIREDHSSNCLEMAD 805
EFC S G+ + +P SL+ H T ST SPR E+H + + D
Sbjct: 691 EFCISGGLKALCGNPKWSLLNDHERTKSPRTSTKVRRETSPRATEEHMAGAGDEVD 746
>SB_9275| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 241
Score = 28.3 bits (60), Expect = 7.7
Identities = 12/33 (36%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = +2
Query: 584 PDAIQIE-VHLQNVQKEMVEFCQSEGVVVMGYS 679
PDA++ E H++ + ++FCQ +VV G+S
Sbjct: 56 PDALRSEGSHMEEQTSKKIKFCQWIAIVVYGFS 88
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,945,645
Number of Sequences: 59808
Number of extensions: 591628
Number of successful extensions: 1939
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1732
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1933
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2239700683
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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