Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10859X
         (450 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q2F5X6 Cluster: Notch-like protein; n=1; Bombyx mori|Re...   105   3e-22
UniRef50_Q7Q112 Cluster: ENSANGP00000011831; n=6; Endopterygota|...    33   2.9  
UniRef50_A0ZA04 Cluster: Binding-protein-dependent transport sys...    33   3.8  
UniRef50_Q8IQ18 Cluster: CG33196-PB; n=10; Endopterygota|Rep: CG...    32   5.0  
UniRef50_Q5YUQ4 Cluster: Putative transcriptional regulator; n=1...    31   8.8  
UniRef50_Q7S1T7 Cluster: Predicted protein; n=1; Neurospora cras...    31   8.8  

>UniRef50_Q2F5X6 Cluster: Notch-like protein; n=1; Bombyx mori|Rep:
            Notch-like protein - Bombyx mori (Silk moth)
          Length = 1122

 Score =  105 bits (253), Expect = 3e-22
 Identities = 52/52 (100%), Positives = 52/52 (100%)
 Frame = +3

Query: 3    ESTALTMPVGQLREEVTVESNQILTTQRREPSQVARQRDGTGAEGASQSSGE 158
            ESTALTMPVGQLREEVTVESNQILTTQRREPSQVARQRDGTGAEGASQSSGE
Sbjct: 1014 ESTALTMPVGQLREEVTVESNQILTTQRREPSQVARQRDGTGAEGASQSSGE 1065


>UniRef50_Q7Q112 Cluster: ENSANGP00000011831; n=6;
           Endopterygota|Rep: ENSANGP00000011831 - Anopheles
           gambiae str. PEST
          Length = 807

 Score = 33.1 bits (72), Expect = 2.9
 Identities = 13/21 (61%), Positives = 18/21 (85%)
 Frame = +3

Query: 30  GQLREEVTVESNQILTTQRRE 92
           G LREE+T++SN ILT ++RE
Sbjct: 699 GTLREEITIQSNAILTLEKRE 719


>UniRef50_A0ZA04 Cluster: Binding-protein-dependent transport
           systems inner membrane component; n=1; Nodularia
           spumigena CCY 9414|Rep: Binding-protein-dependent
           transport systems inner membrane component - Nodularia
           spumigena CCY 9414
          Length = 524

 Score = 32.7 bits (71), Expect = 3.8
 Identities = 17/50 (34%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
 Frame = +3

Query: 9   TALTMPVGQLREEVTVESNQILTTQRREPSQVARQ-RDGTGAEGASQSSG 155
           TAL    G++ +E+  E N ++  +++ PSQVAR+     G + ++Q SG
Sbjct: 330 TALDKLTGKISDEIMAELNYLVDEKKQPPSQVAREFLQKLGFKTSTQRSG 379


>UniRef50_Q8IQ18 Cluster: CG33196-PB; n=10; Endopterygota|Rep:
             CG33196-PB - Drosophila melanogaster (Fruit fly)
          Length = 23015

 Score = 32.3 bits (70), Expect = 5.0
 Identities = 13/20 (65%), Positives = 17/20 (85%)
 Frame = +3

Query: 30    GQLREEVTVESNQILTTQRR 89
             GQLREE+T+ SN ILT ++R
Sbjct: 22907 GQLREEITISSNAILTFEKR 22926


>UniRef50_Q5YUQ4 Cluster: Putative transcriptional regulator; n=1;
           Nocardia farcinica|Rep: Putative transcriptional
           regulator - Nocardia farcinica
          Length = 200

 Score = 31.5 bits (68), Expect = 8.8
 Identities = 17/40 (42%), Positives = 22/40 (55%)
 Frame = -1

Query: 141 WHLLHQYHHAAEPLVTVRVAASLVFGSIRRSPPLEVDLPA 22
           W L+ Q   +A  L TV   A LV GS+R + P + DL A
Sbjct: 19  WRLIDQSGVSAVSLRTVAAEAGLVLGSLRHTFPTKADLLA 58


>UniRef50_Q7S1T7 Cluster: Predicted protein; n=1; Neurospora
           crassa|Rep: Predicted protein - Neurospora crassa
          Length = 324

 Score = 31.5 bits (68), Expect = 8.8
 Identities = 14/33 (42%), Positives = 21/33 (63%)
 Frame = -1

Query: 147 SDWHLLHQYHHAAEPLVTVRVAASLVFGSIRRS 49
           SD+ L   Y HAA+P+ T   A  L+FG++ R+
Sbjct: 195 SDYTLALAYFHAAQPVFTSSEALELLFGALART 227


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 398,039,356
Number of Sequences: 1657284
Number of extensions: 6743378
Number of successful extensions: 22797
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 21979
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22789
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 23604537544
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)