Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10859X
         (450 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC127005-1|AAI27006.1|  823|Homo sapiens egf-like module contain...    29   7.3  
BC127004-1|AAI27005.1|  823|Homo sapiens egf-like module contain...    29   7.3  
AK222891-1|BAD96611.1|  810|Homo sapiens egf-like module contain...    29   7.3  
AF114491-1|AAF21974.1|  823|Homo sapiens EGF-like module EMR2 pr...    29   7.3  
AB065931-1|BAC06146.1|  837|Homo sapiens seven transmembrane hel...    29   7.3  

>BC127005-1|AAI27006.1|  823|Homo sapiens egf-like module
           containing, mucin-like, hormone receptor-like 2 protein.
          Length = 823

 Score = 29.1 bits (62), Expect = 7.3
 Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
 Frame = -2

Query: 182 ESGC*H-AHFSTALTGTFCTSTITLPSHL*RFASLRR*YLVRFDGHLLSKLTY 27
           ++GC H A    +  GT  TSTI   +HL  FA L   Y V+ +  +L+ +TY
Sbjct: 489 QNGCGHWATTGCSTIGTRDTSTICRCTHLSSFAVLMAHYDVQEEDPVLTVITY 541


>BC127004-1|AAI27005.1|  823|Homo sapiens egf-like module
           containing, mucin-like, hormone receptor-like 2 protein.
          Length = 823

 Score = 29.1 bits (62), Expect = 7.3
 Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
 Frame = -2

Query: 182 ESGC*H-AHFSTALTGTFCTSTITLPSHL*RFASLRR*YLVRFDGHLLSKLTY 27
           ++GC H A    +  GT  TSTI   +HL  FA L   Y V+ +  +L+ +TY
Sbjct: 489 QNGCGHWATTGCSTIGTRDTSTICRCTHLSSFAVLMAHYDVQEEDPVLTVITY 541


>AK222891-1|BAD96611.1|  810|Homo sapiens egf-like module
           containing, mucin-like, hormone receptor-like sequence 2
           isofor protein.
          Length = 810

 Score = 29.1 bits (62), Expect = 7.3
 Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
 Frame = -2

Query: 182 ESGC*H-AHFSTALTGTFCTSTITLPSHL*RFASLRR*YLVRFDGHLLSKLTY 27
           ++GC H A    +  GT  TSTI   +HL  FA L   Y V+ +  +L+ +TY
Sbjct: 478 QNGCGHWATTGCSTIGTRDTSTICRCTHLSSFAVLMAHYDVQEEDPVLTVITY 530


>AF114491-1|AAF21974.1|  823|Homo sapiens EGF-like module EMR2
           protein.
          Length = 823

 Score = 29.1 bits (62), Expect = 7.3
 Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
 Frame = -2

Query: 182 ESGC*H-AHFSTALTGTFCTSTITLPSHL*RFASLRR*YLVRFDGHLLSKLTY 27
           ++GC H A    +  GT  TSTI   +HL  FA L   Y V+ +  +L+ +TY
Sbjct: 489 QNGCGHWATTGCSTIGTRDTSTICRCTHLSSFAVLMAHYDVQEEDPVLTVITY 541


>AB065931-1|BAC06146.1|  837|Homo sapiens seven transmembrane helix
           receptor protein.
          Length = 837

 Score = 29.1 bits (62), Expect = 7.3
 Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
 Frame = -2

Query: 182 ESGC*H-AHFSTALTGTFCTSTITLPSHL*RFASLRR*YLVRFDGHLLSKLTY 27
           ++GC H A    +  GT  TSTI   +HL  FA L   Y V+ +  +L+ +TY
Sbjct: 490 QNGCGHWATTGCSTIGTRDTSTICRCTHLSSFAVLMAHYDVQEEDPVLTVITY 542


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 58,290,973
Number of Sequences: 237096
Number of extensions: 1061496
Number of successful extensions: 3888
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3665
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3888
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3701294870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)