Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10853
         (751 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z82057-3|CAB04860.2|  303|Caenorhabditis elegans Hypothetical pr...    31   0.66 
Z69383-1|CAA93412.1|  409|Caenorhabditis elegans Hypothetical pr...    29   4.7  
AL117204-12|CAB55127.1|  385|Caenorhabditis elegans Hypothetical...    29   4.7  
AF106576-1|AAC78177.2|  664|Caenorhabditis elegans Hypothetical ...    28   6.2  
U58734-4|AAB52501.1|  274|Caenorhabditis elegans Hypothetical pr...    28   8.1  

>Z82057-3|CAB04860.2|  303|Caenorhabditis elegans Hypothetical
           protein T26H8.2 protein.
          Length = 303

 Score = 31.5 bits (68), Expect = 0.66
 Identities = 20/68 (29%), Positives = 32/68 (47%)
 Frame = -1

Query: 211 HNKFFQFIIST*CQYSVKF*KSIYFFQVFIL*MRT*QMTRVIQT*PYYCVETLKVFKIIC 32
           H+  F FI+S+ C + +KF KS  +    IL      +T  + T  + C+   +   I+ 
Sbjct: 56  HSTIFAFIVSSMCFFDLKFLKSYSYIVGHIL-----IITYEVSTYSHLCISLNRFCSIVA 110

Query: 31  PFSIISSF 8
           P S  S F
Sbjct: 111 PISYESIF 118


>Z69383-1|CAA93412.1|  409|Caenorhabditis elegans Hypothetical
           protein F13E9.4 protein.
          Length = 409

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 15/43 (34%), Positives = 24/43 (55%)
 Frame = +3

Query: 603 LKKRHSSSEQIYMGSSLSDNSNYGSHHNLYSQWYHGTQKYRHS 731
           L+ +H  ++   MGS+ + NSNYG + N  S   +G   Y H+
Sbjct: 345 LQNQHEQTQYARMGSNGNSNSNYG-NSNFNSN--YGNNGYNHN 384


>AL117204-12|CAB55127.1|  385|Caenorhabditis elegans Hypothetical
           protein Y116A8C.21 protein.
          Length = 385

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 14/38 (36%), Positives = 23/38 (60%)
 Frame = -1

Query: 244 LSMFVNKNFLPHNKFFQFIIST*CQYSVKF*KSIYFFQ 131
           L+   +K+ +P  K F FII+   + + +  KS+YFFQ
Sbjct: 271 LAKLTSKSLIPLIKTFGFIIAPNIRNNFEIFKSLYFFQ 308


>AF106576-1|AAC78177.2|  664|Caenorhabditis elegans Hypothetical
           protein W07E6.1 protein.
          Length = 664

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 13/38 (34%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
 Frame = +3

Query: 573 TLRTSKSSADLKKRHSSSEQIYMGS--SLSDNSNYGSH 680
           +++TSK S D+++RH+   Q+ + +  SL  NS  G +
Sbjct: 396 SVKTSKDSQDVQRRHTMQRQLILSALDSLDANSPNGGY 433


>U58734-4|AAB52501.1|  274|Caenorhabditis elegans Hypothetical
           protein T27A10.2 protein.
          Length = 274

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 12/47 (25%), Positives = 23/47 (48%)
 Frame = +3

Query: 558 DTLRPTLRTSKSSADLKKRHSSSEQIYMGSSLSDNSNYGSHHNLYSQ 698
           D  +P     +++      H     +   SS+S  S++GS+H+ YS+
Sbjct: 120 DNTQPLEALKRATYKFSVSHHVQTMVPRRSSVSSGSSFGSNHSYYSE 166


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,877,886
Number of Sequences: 27780
Number of extensions: 353365
Number of successful extensions: 1171
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1121
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1171
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1777507862
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)