Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10851
(712 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation fact... 189 2e-48
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 176 1e-44
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 176 1e-44
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 138 5e-33
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 120 1e-27
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 120 1e-27
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 98 6e-21
U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation f... 69 3e-12
AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial... 69 3e-12
D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation fact... 66 2e-11
D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation fact... 66 2e-11
AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongatio... 66 2e-11
L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical pr... 50 2e-06
AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical ... 40 0.002
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 39 0.004
Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical p... 38 0.007
Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical pr... 33 0.15
Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical pr... 33 0.15
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 33 0.27
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 33 0.27
U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation fact... 31 1.1
L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding pro... 31 1.1
AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditi... 31 1.1
AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical ... 31 1.1
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 30 1.4
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 30 1.9
DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic tr... 30 1.9
AL008869-2|CAC42315.1| 810|Caenorhabditis elegans Hypothetical ... 29 2.5
AL008869-1|CAA15516.1| 808|Caenorhabditis elegans Hypothetical ... 29 2.5
AB032749-1|BAA92158.1| 810|Caenorhabditis elegans EAT-20B protein. 29 2.5
AB032748-1|BAA92157.1| 808|Caenorhabditis elegans EAT-20A protein. 29 2.5
AC024741-1|AAK68394.3| 789|Caenorhabditis elegans Hypothetical ... 29 3.3
Z95559-9|CAI46625.1| 510|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical pr... 28 7.6
Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical pr... 28 7.6
>U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation factor
protein 4, isoformc protein.
Length = 267
Score = 189 bits (460), Expect = 2e-48
Identities = 105/175 (60%), Positives = 115/175 (65%)
Frame = +3
Query: 3 SFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCA 182
SFKYAWVLDKLKAERERGITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCA
Sbjct: 53 SFKYAWVLDKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCA 112
Query: 183 VLIVAAGTGEFEAGISKNGQTREHPCXXXXXXXXXXXXE*TKWIPLNHHTVSPDLRKSRR 362
VL+VA GTGEFEAGISKNGQTREH + + L T SPD
Sbjct: 113 VLVVACGTGEFEAGISKNGQTREHALLAQTLGV-------KQLVSLRSPTRSPD------ 159
Query: 363 KYPHTSRRLATTQLLSLSCPFLDGTETTCWSLQPKCLGSRDGRWSVKKAS*RKMP 527
+SRR T Q L D TETTC C GSRDG + +K + + P
Sbjct: 160 ----SSRRSDTIQRLFHLSQSPDSTETTCLRSPRTCHGSRDGLLNARKETLPERP 210
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 176 bits (429), Expect = 1e-44
Identities = 80/84 (95%), Positives = 83/84 (98%)
Frame = +3
Query: 3 SFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCA 182
SFKYAWVLDKLKAERERGITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCA
Sbjct: 53 SFKYAWVLDKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCA 112
Query: 183 VLIVAAGTGEFEAGISKNGQTREH 254
VL+VA GTGEFEAGISKNGQTREH
Sbjct: 113 VLVVACGTGEFEAGISKNGQTREH 136
Score = 142 bits (344), Expect = 2e-34
Identities = 67/94 (71%), Positives = 75/94 (79%)
Frame = +2
Query: 254 SLLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGW 433
+LLA TLGVKQLIV NKMDSTEPP+SE RF EI EVS +IKKIGYNP AV FVPISG+
Sbjct: 137 ALLAQTLGVKQLIVACNKMDSTEPPFSEARFTEITNEVSGFIKKIGYNPKAVPFVPISGF 196
Query: 434 HGDNMLEPSTKMPWFKGWQVERKEGKLTENASLK 535
+GDNMLE S+ MPWFKGW VERKEG + L+
Sbjct: 197 NGDNMLEVSSNMPWFKGWAVERKEGNASGKTLLE 230
Score = 110 bits (265), Expect = 8e-25
Identities = 48/60 (80%), Positives = 55/60 (91%)
Frame = +1
Query: 511 ADGKCLIEALDAILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAP 690
A GK L+EALD+I+PP RPTD+PLRLPLQDVYKIGGIGTVPVGRVETG++KPG +V FAP
Sbjct: 223 ASGKTLLEALDSIIPPQRPTDRPLRLPLQDVYKIGGIGTVPVGRVETGIIKPGMVVTFAP 282
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 176 bits (429), Expect = 1e-44
Identities = 80/84 (95%), Positives = 83/84 (98%)
Frame = +3
Query: 3 SFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCA 182
SFKYAWVLDKLKAERERGITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCA
Sbjct: 53 SFKYAWVLDKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCA 112
Query: 183 VLIVAAGTGEFEAGISKNGQTREH 254
VL+VA GTGEFEAGISKNGQTREH
Sbjct: 113 VLVVACGTGEFEAGISKNGQTREH 136
Score = 142 bits (344), Expect = 2e-34
Identities = 67/94 (71%), Positives = 75/94 (79%)
Frame = +2
Query: 254 SLLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGW 433
+LLA TLGVKQLIV NKMDSTEPP+SE RF EI EVS +IKKIGYNP AV FVPISG+
Sbjct: 137 ALLAQTLGVKQLIVACNKMDSTEPPFSEARFTEITNEVSGFIKKIGYNPKAVPFVPISGF 196
Query: 434 HGDNMLEPSTKMPWFKGWQVERKEGKLTENASLK 535
+GDNMLE S+ MPWFKGW VERKEG + L+
Sbjct: 197 NGDNMLEVSSNMPWFKGWAVERKEGNASGKTLLE 230
Score = 110 bits (265), Expect = 8e-25
Identities = 48/60 (80%), Positives = 55/60 (91%)
Frame = +1
Query: 511 ADGKCLIEALDAILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAP 690
A GK L+EALD+I+PP RPTD+PLRLPLQDVYKIGGIGTVPVGRVETG++KPG +V FAP
Sbjct: 223 ASGKTLLEALDSIIPPQRPTDRPLRLPLQDVYKIGGIGTVPVGRVETGIIKPGMVVTFAP 282
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 138 bits (333), Expect = 5e-33
Identities = 62/65 (95%), Positives = 65/65 (100%)
Frame = +3
Query: 3 SFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCA 182
SFKYAWVLDKLKAERERGITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCA
Sbjct: 53 SFKYAWVLDKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCA 112
Query: 183 VLIVA 197
VL+VA
Sbjct: 113 VLVVA 117
Score = 126 bits (304), Expect = 2e-29
Identities = 57/83 (68%), Positives = 65/83 (78%)
Frame = +2
Query: 287 LIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTK 466
L+V NKMDSTEPP+SE RF EI EVS +IKKIGYNP AV FVPISG++GDNMLE S+
Sbjct: 114 LVVACNKMDSTEPPFSEARFTEITNEVSGFIKKIGYNPKAVPFVPISGFNGDNMLEVSSN 173
Query: 467 MPWFKGWQVERKEGKLTENASLK 535
MPWFKGW VERKEG + L+
Sbjct: 174 MPWFKGWAVERKEGNASGKTLLE 196
Score = 110 bits (265), Expect = 8e-25
Identities = 48/60 (80%), Positives = 55/60 (91%)
Frame = +1
Query: 511 ADGKCLIEALDAILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAP 690
A GK L+EALD+I+PP RPTD+PLRLPLQDVYKIGGIGTVPVGRVETG++KPG +V FAP
Sbjct: 189 ASGKTLLEALDSIIPPQRPTDRPLRLPLQDVYKIGGIGTVPVGRVETGIIKPGMVVTFAP 248
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 120 bits (289), Expect = 1e-27
Identities = 53/84 (63%), Positives = 64/84 (76%)
Frame = +3
Query: 3 SFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCA 182
SF YAWVLD+ + ERERG+T+DI FETS + ++DAPGH+DFI NMITGTSQAD A
Sbjct: 216 SFAYAWVLDETEEERERGVTMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQADAA 275
Query: 183 VLIVAAGTGEFEAGISKNGQTREH 254
+L+V A TGEFE G GQT+EH
Sbjct: 276 ILVVNATTGEFETGFENGGQTKEH 299
Score = 57.2 bits (132), Expect = 1e-08
Identities = 30/78 (38%), Positives = 54/78 (69%), Gaps = 1/78 (1%)
Frame = +2
Query: 254 SLLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYI-KKIGYNPAAVAFVPISG 430
+LL +LGV QLIV VNK+D+ + +S+ RF+EIK +S ++ ++ G++ FVP+SG
Sbjct: 300 ALLLRSLGVTQLIVAVNKLDTVD--WSQDRFDEIKNNLSVFLTRQAGFSKP--KFVPVSG 355
Query: 431 WHGDNMLEPSTKMPWFKG 484
+ G+N+++ ++ W+ G
Sbjct: 356 FTGENLIK-RMELDWYDG 372
Score = 47.6 bits (108), Expect = 9e-06
Identities = 22/63 (34%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Frame = +1
Query: 514 DGKCLIEALDAILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETG-VLKPGTIVVFAP 690
DG CL+E +D+ + P P+D PLR+ + DV K+ V G++E+G V K + + +
Sbjct: 371 DGPCLLELIDSFVAPQPPSDGPLRIGISDVLKVASNQLVVSGKIESGEVEKDDKVYIMSS 430
Query: 691 PTS 699
T+
Sbjct: 431 VTA 433
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 120 bits (289), Expect = 1e-27
Identities = 53/84 (63%), Positives = 64/84 (76%)
Frame = +3
Query: 3 SFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCA 182
SF YAWVLD+ + ERERG+T+DI FETS + ++DAPGH+DFI NMITGTSQAD A
Sbjct: 234 SFAYAWVLDETEEERERGVTMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQADAA 293
Query: 183 VLIVAAGTGEFEAGISKNGQTREH 254
+L+V A TGEFE G GQT+EH
Sbjct: 294 ILVVNATTGEFETGFENGGQTKEH 317
Score = 57.2 bits (132), Expect = 1e-08
Identities = 30/78 (38%), Positives = 54/78 (69%), Gaps = 1/78 (1%)
Frame = +2
Query: 254 SLLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYI-KKIGYNPAAVAFVPISG 430
+LL +LGV QLIV VNK+D+ + +S+ RF+EIK +S ++ ++ G++ FVP+SG
Sbjct: 318 ALLLRSLGVTQLIVAVNKLDTVD--WSQDRFDEIKNNLSVFLTRQAGFSKP--KFVPVSG 373
Query: 431 WHGDNMLEPSTKMPWFKG 484
+ G+N+++ ++ W+ G
Sbjct: 374 FTGENLIK-RMELDWYDG 390
Score = 47.6 bits (108), Expect = 9e-06
Identities = 22/63 (34%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Frame = +1
Query: 514 DGKCLIEALDAILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETG-VLKPGTIVVFAP 690
DG CL+E +D+ + P P+D PLR+ + DV K+ V G++E+G V K + + +
Sbjct: 389 DGPCLLELIDSFVAPQPPSDGPLRIGISDVLKVASNQLVVSGKIESGEVEKDDKVYIMSS 448
Query: 691 PTS 699
T+
Sbjct: 449 VTA 451
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 97.9 bits (233), Expect = 6e-21
Identities = 42/84 (50%), Positives = 58/84 (69%)
Frame = +3
Query: 3 SFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCA 182
S+ +W +D ERE+G T+++ FET K + TI+DAPGH+ F+ NMI G +QAD A
Sbjct: 155 SWYLSWCMDTNDEEREKGKTVEVGRAYFETEKRHFTILDAPGHKSFVPNMIVGANQADLA 214
Query: 183 VLIVAAGTGEFEAGISKNGQTREH 254
VL+++A GEFE G + GQTREH
Sbjct: 215 VLVISARRGEFETGFDRGGQTREH 238
Score = 58.0 bits (134), Expect = 6e-09
Identities = 29/80 (36%), Positives = 49/80 (61%), Gaps = 3/80 (3%)
Frame = +2
Query: 254 SLLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAA-VAFVPISG 430
S+L T GVK L++ VNKMD + E RF+EI+ +++ +++K+G+NP + +VP SG
Sbjct: 239 SMLVKTAGVKHLVILVNKMDDPTVKWEEERFKEIEGKLTPFLRKLGFNPKTDITYVPCSG 298
Query: 431 WHGDNMLEPST--KMPWFKG 484
G + + T + W+ G
Sbjct: 299 LTGAFIKDRPTGSEGNWYSG 318
Score = 37.9 bits (84), Expect = 0.007
Identities = 20/59 (33%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Frame = +1
Query: 517 GKCLIEALDAILPP-ARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAP 690
G C IE +D +LP R + P+R + + Y +GTV +G++E+G ++ G +V P
Sbjct: 318 GPCFIEFIDVLLPSYKRDFNGPVRCTVAEKYS--EMGTVIIGKMESGCVQKGDTLVVMP 374
>U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 2 protein.
Length = 439
Score = 69.3 bits (162), Expect = 3e-12
Identities = 38/77 (49%), Positives = 49/77 (63%)
Frame = +3
Query: 24 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 203
+DK K E++RGITI++A +E+ + D PGH DFIKNMI GTSQ D AVL++AA
Sbjct: 83 IDKGKEEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAAT 142
Query: 204 TGEFEAGISKNGQTREH 254
G E QT+EH
Sbjct: 143 DGVME-------QTKEH 152
Score = 37.9 bits (84), Expect = 0.007
Identities = 21/48 (43%), Positives = 27/48 (56%)
Frame = +1
Query: 526 LIEALDAILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG 669
LI+ALD++ P R +P+ I G GTV VG +E GVLK G
Sbjct: 222 LIDALDSLPEPDRNEKDTFVMPIASKTAITGRGTVIVGTLERGVLKKG 269
>AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial
elongation factorTu homologue protein.
Length = 439
Score = 69.3 bits (162), Expect = 3e-12
Identities = 38/77 (49%), Positives = 49/77 (63%)
Frame = +3
Query: 24 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 203
+DK K E++RGITI++A +E+ + D PGH DFIKNMI GTSQ D AVL++AA
Sbjct: 83 IDKGKEEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAAT 142
Query: 204 TGEFEAGISKNGQTREH 254
G E QT+EH
Sbjct: 143 DGVME-------QTKEH 152
Score = 37.9 bits (84), Expect = 0.007
Identities = 21/48 (43%), Positives = 27/48 (56%)
Frame = +1
Query: 526 LIEALDAILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG 669
LI+ALD++ P R +P+ I G GTV VG +E GVLK G
Sbjct: 222 LIDALDSLPEPDRNEKDTFVMPIASKTAITGRGTVIVGTLERGVLKKG 269
>D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 495
Score = 66.1 bits (154), Expect = 2e-11
Identities = 35/77 (45%), Positives = 47/77 (61%)
Frame = +3
Query: 24 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 203
+D E+ RGITI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA
Sbjct: 87 IDNAPEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAAT 146
Query: 204 TGEFEAGISKNGQTREH 254
G QTREH
Sbjct: 147 DGPMP-------QTREH 156
Score = 36.3 bits (80), Expect = 0.022
Identities = 20/52 (38%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Frame = +1
Query: 520 KCLIEALDA--ILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG 669
K L+E LD ++P + ++P+ + VY I G GTV G++E G+LK G
Sbjct: 231 KQLLEVLDNKFVIPERKVNEEPM-FAAEHVYSIVGRGTVITGKLERGILKRG 281
>D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 496
Score = 66.1 bits (154), Expect = 2e-11
Identities = 35/77 (45%), Positives = 47/77 (61%)
Frame = +3
Query: 24 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 203
+D E+ RGITI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA
Sbjct: 88 IDNAPEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAAT 147
Query: 204 TGEFEAGISKNGQTREH 254
G QTREH
Sbjct: 148 DGPMP-------QTREH 157
Score = 36.3 bits (80), Expect = 0.022
Identities = 20/52 (38%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Frame = +1
Query: 520 KCLIEALDA--ILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG 669
K L+E LD ++P + ++P+ + VY I G GTV G++E G+LK G
Sbjct: 232 KQLLEVLDNKFVIPERKVNEEPM-FAAEHVYSIVGRGTVITGKLERGILKRG 282
>AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 1 protein.
Length = 496
Score = 66.1 bits (154), Expect = 2e-11
Identities = 35/77 (45%), Positives = 47/77 (61%)
Frame = +3
Query: 24 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 203
+D E+ RGITI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA
Sbjct: 88 IDNAPEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAAT 147
Query: 204 TGEFEAGISKNGQTREH 254
G QTREH
Sbjct: 148 DGPMP-------QTREH 157
Score = 36.3 bits (80), Expect = 0.022
Identities = 20/52 (38%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Frame = +1
Query: 520 KCLIEALDA--ILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG 669
K L+E LD ++P + ++P+ + VY I G GTV G++E G+LK G
Sbjct: 232 KQLLEVLDNKFVIPERKVNEEPM-FAAEHVYSIVGRGTVITGKLERGILKRG 282
>L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical
protein ZK1236.1 protein.
Length = 645
Score = 50.0 bits (114), Expect = 2e-06
Identities = 25/63 (39%), Positives = 34/63 (53%)
Frame = +3
Query: 21 VLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAA 200
+LDKL+ ERERGIT+ Y + +ID PGH DF + + D +L+VAA
Sbjct: 76 MLDKLQVERERGITVKAQTAALRHRGYLLNLIDTPGHVDFSAEVSRSLAVCDGILLLVAA 135
Query: 201 GTG 209
G
Sbjct: 136 NQG 138
>AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical
protein Y119D3B.14 protein.
Length = 689
Score = 39.9 bits (89), Expect = 0.002
Identities = 21/63 (33%), Positives = 30/63 (47%)
Frame = +3
Query: 21 VLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAA 200
V D L ERERGIT+ A + + + +ID PGH DF + D V+++
Sbjct: 64 VTDFLDIERERGITVQSAAVNLDWKGHRINLIDTPGHVDFRVEVERCVRVLDGIVVVIDG 123
Query: 201 GTG 209
G
Sbjct: 124 SAG 126
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 38.7 bits (86), Expect = 0.004
Identities = 23/62 (37%), Positives = 31/62 (50%)
Frame = +3
Query: 24 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 203
+D + ER+RGITI A + + IID PGH DF + D AVL++ G
Sbjct: 87 MDFMDLERQRGITIQSAATYVDWHGTNINIIDTPGHVDFTVEVERALRVLDGAVLVL-CG 145
Query: 204 TG 209
G
Sbjct: 146 VG 147
>Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical
protein F46B6.6a protein.
Length = 702
Score = 37.9 bits (84), Expect = 0.007
Identities = 22/53 (41%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = +3
Query: 54 GITIDIALWKFETSK-YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 209
GIT I + E +K VT +D PGH F G AD VL+VAA G
Sbjct: 188 GITQHIGAFSVELTKGRRVTFLDTPGHAAFASMRARGAKGADIVVLVVAADDG 240
>Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical
protein K10C3.5b protein.
Length = 705
Score = 33.5 bits (73), Expect = 0.15
Identities = 16/57 (28%), Positives = 30/57 (52%)
Frame = +3
Query: 24 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 194
+D + E+ RGIT+ + + +ID+PGH DF + + +D A+L++
Sbjct: 58 MDSREDEQTRGITMKSSGISLLCEPLLINLIDSPGHVDFSGEVTSALILSDIALLLI 114
>Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical
protein K10C3.5a protein.
Length = 894
Score = 33.5 bits (73), Expect = 0.15
Identities = 16/57 (28%), Positives = 30/57 (52%)
Frame = +3
Query: 24 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 194
+D + E+ RGIT+ + + +ID+PGH DF + + +D A+L++
Sbjct: 58 MDSREDEQTRGITMKSSGISLLCEPLLINLIDSPGHVDFSGEVTSALILSDIALLLI 114
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 32.7 bits (71), Expect = 0.27
Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 5/66 (7%)
Frame = +3
Query: 27 DKLKAERERGITI-----DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 191
D L E++RG +I I + Y + IID PGH +F M AD V++
Sbjct: 172 DILFIEKQRGCSIKSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVM 231
Query: 192 VAAGTG 209
V A G
Sbjct: 232 VDAHEG 237
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 32.7 bits (71), Expect = 0.27
Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 5/66 (7%)
Frame = +3
Query: 27 DKLKAERERGITI-----DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 191
D L E++RG +I I + Y + IID PGH +F M AD V++
Sbjct: 47 DILFIEKQRGCSIKSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVM 106
Query: 192 VAAGTG 209
V A G
Sbjct: 107 VDAHEG 112
>U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation
factor protein 4, isoformb protein.
Length = 77
Score = 30.7 bits (66), Expect = 1.1
Identities = 12/15 (80%), Positives = 13/15 (86%)
Frame = +3
Query: 3 SFKYAWVLDKLKAER 47
SFKYAWVLDKLK +
Sbjct: 53 SFKYAWVLDKLKVTK 67
>L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding
protein protein.
Length = 593
Score = 30.7 bits (66), Expect = 1.1
Identities = 10/41 (24%), Positives = 23/41 (56%)
Frame = +1
Query: 577 PLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPPTS 699
P + D+Y + G+GT+ G + +G ++ I++ P ++
Sbjct: 373 PAHFQIDDIYWVDGVGTIASGTLLSGTIRLNDILLLGPTSN 413
>AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditis
gtp-binding proteinprotein 1 protein.
Length = 613
Score = 30.7 bits (66), Expect = 1.1
Identities = 10/41 (24%), Positives = 23/41 (56%)
Frame = +1
Query: 577 PLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPPTS 699
P + D+Y + G+GT+ G + +G ++ I++ P ++
Sbjct: 372 PAHFQIDDIYWVDGVGTIASGTLLSGTIRLNDILLLGPTSN 412
>AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical
protein Y39G10AR.8 protein.
Length = 469
Score = 30.7 bits (66), Expect = 1.1
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +3
Query: 102 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 197
+V+ +D PGH + M+ G + D A L+VA
Sbjct: 128 HVSFVDCPGHDILMATMLNGAAVMDAAFLLVA 159
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 30.3 bits (65), Expect = 1.4
Identities = 13/50 (26%), Positives = 27/50 (54%)
Frame = +3
Query: 60 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 209
T+++ K + + + + +ID+PGH DF + D A+++V +G
Sbjct: 97 TVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALGVTDGALVVVDCVSG 146
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical
protein F25H5.4 protein.
Length = 852
Score = 29.9 bits (64), Expect = 1.9
Identities = 13/50 (26%), Positives = 27/50 (54%)
Frame = +3
Query: 60 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 209
T+++ K + + + + +ID+PGH DF + D A+++V +G
Sbjct: 97 TVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDCVSG 146
>DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic
translation initiationfactor eIF5B protein.
Length = 1074
Score = 29.9 bits (64), Expect = 1.9
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +3
Query: 111 IIDAPGHRDFIKNMITGTSQADCAVLIV 194
IID PGH F G+S D A+L+V
Sbjct: 553 IIDTPGHESFSNLRTRGSSLCDFAILVV 580
>AL008869-2|CAC42315.1| 810|Caenorhabditis elegans Hypothetical
protein H30A04.1b protein.
Length = 810
Score = 29.5 bits (63), Expect = 2.5
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +3
Query: 369 PHTSRRLATTQLLSLSCPFLD 431
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>AL008869-1|CAA15516.1| 808|Caenorhabditis elegans Hypothetical
protein H30A04.1a protein.
Length = 808
Score = 29.5 bits (63), Expect = 2.5
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +3
Query: 369 PHTSRRLATTQLLSLSCPFLD 431
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>AB032749-1|BAA92158.1| 810|Caenorhabditis elegans EAT-20B protein.
Length = 810
Score = 29.5 bits (63), Expect = 2.5
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +3
Query: 369 PHTSRRLATTQLLSLSCPFLD 431
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>AB032748-1|BAA92157.1| 808|Caenorhabditis elegans EAT-20A protein.
Length = 808
Score = 29.5 bits (63), Expect = 2.5
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +3
Query: 369 PHTSRRLATTQLLSLSCPFLD 431
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>AC024741-1|AAK68394.3| 789|Caenorhabditis elegans Hypothetical
protein R05G9R.1 protein.
Length = 789
Score = 29.1 bits (62), Expect = 3.3
Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = -2
Query: 627 GTNTTDFVYVLQGKTQGLVSGAGRW-QDGIESFNEAFSVSLPSLRSTCHPLNQGILVEGS 451
GT+TT + + + + S + W DG + + + P LR+T PL+ G L E
Sbjct: 505 GTSTTPMFPIPIARYEQVNSSSSMWPMDGQRRPSTSDHTTTPQLRTTAAPLSPGRLSEQQ 564
Query: 450 N 448
N
Sbjct: 565 N 565
>Z95559-9|CAI46625.1| 510|Caenorhabditis elegans Hypothetical
protein Y41E3.18 protein.
Length = 510
Score = 28.7 bits (61), Expect = 4.3
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +1
Query: 604 YKIGGIGTVPVGRVETGVLKPGTIVVFAPPTSLLK 708
Y IG T+ + R E KP +++ APPTS+L+
Sbjct: 349 YSIGSAATIELLRHEQDQ-KPAGVILQAPPTSILR 382
>Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical
protein C47B2.7b protein.
Length = 500
Score = 27.9 bits (59), Expect = 7.6
Identities = 16/50 (32%), Positives = 27/50 (54%)
Frame = +3
Query: 105 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREH 254
+ +ID PGH I+ ++ ++ D A++I+ + AGI QT EH
Sbjct: 74 LALIDCPGHSGLIRAVLAASTVFDMAIVII-----DVVAGIQP--QTAEH 116
>Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical
protein D1081.4 protein.
Length = 381
Score = 27.9 bits (59), Expect = 7.6
Identities = 17/34 (50%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +3
Query: 105 VTIIDAPGHRDFI--KNMITGTSQADCAVLIVAA 200
V IID+ G RDFI KN+ GT AD +++ AA
Sbjct: 73 VQIIDSSGSRDFIGMKNLYIGT--ADAFLVVFAA 104
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,259,120
Number of Sequences: 27780
Number of extensions: 415284
Number of successful extensions: 1343
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 1232
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1338
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1655655746
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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