BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdV10849 (742 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 25 0.75 DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 25 0.75 AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 25 0.99 AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein ... 22 5.3 AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein. 21 9.2 >DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine receptor alpha4subunit protein. Length = 569 Score = 25.0 bits (52), Expect = 0.75 Identities = 10/17 (58%), Positives = 12/17 (70%) Frame = +3 Query: 120 HHSVRGGSEEHLSPPRF 170 H S + SEEHL+P RF Sbjct: 393 HPSTQEDSEEHLTPKRF 409 >DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine receptor alpha4subunit protein. Length = 569 Score = 25.0 bits (52), Expect = 0.75 Identities = 10/17 (58%), Positives = 12/17 (70%) Frame = +3 Query: 120 HHSVRGGSEEHLSPPRF 170 H S + SEEHL+P RF Sbjct: 393 HPSTQEDSEEHLTPKRF 409 >AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation factor 2 protein. Length = 690 Score = 24.6 bits (51), Expect = 0.99 Identities = 13/31 (41%), Positives = 16/31 (51%) Frame = -3 Query: 308 GDVGAVFGGFQFTLESSDRVTLCCDMPSCSA 216 G + G F TLES +RVT D P +A Sbjct: 176 GGITQCIGAFDVTLESGERVTF-LDTPGHAA 205 >AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein protein. Length = 352 Score = 22.2 bits (45), Expect = 5.3 Identities = 8/18 (44%), Positives = 11/18 (61%) Frame = +3 Query: 117 GHHSVRGGSEEHLSPPRF 170 GHH GS++ + PRF Sbjct: 63 GHHYGAAGSQQDMPYPRF 80 >AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein. Length = 429 Score = 21.4 bits (43), Expect = 9.2 Identities = 12/44 (27%), Positives = 20/44 (45%), Gaps = 6/44 (13%) Frame = -2 Query: 666 GNVRASRPPSAXXX------SEHKTTDGVIEPERIVAPSINTFN 553 G + RPP++ SEH +T + +I P+ +FN Sbjct: 266 GAAASDRPPASASSNEHEAESEHTSTPNFLSEAKIFPPTPGSFN 309 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 171,788 Number of Sequences: 438 Number of extensions: 3318 Number of successful extensions: 10 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 10 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 10 length of database: 146,343 effective HSP length: 56 effective length of database: 121,815 effective search space used: 23144850 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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