Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10849
(742 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g41790.1 68418.m05088 COP1-interactive protein 1 / CIP1 almos... 35 0.065
At4g14760.1 68417.m02271 M protein repeat-containing protein con... 34 0.086
At5g61920.1 68418.m07773 hypothetical protein 34 0.11
At1g29320.1 68414.m03584 transducin family protein / WD-40 repea... 34 0.11
At3g54740.1 68416.m06056 expressed protein contains Pfam profile... 33 0.20
At2g42480.1 68415.m05255 meprin and TRAF homology domain-contain... 33 0.20
At1g77920.1 68414.m09080 bZIP family transcription factor contai... 33 0.20
At4g36520.1 68417.m05185 trichohyalin-related low similarity to ... 33 0.26
At5g65770.1 68418.m08276 nuclear matrix constituent protein-rela... 32 0.35
At1g75150.1 68414.m08729 expressed protein ; expression supporte... 32 0.35
At1g04600.1 68414.m00454 myosin, putative similar to myosin (GI:... 32 0.35
At4g31340.1 68417.m04445 myosin heavy chain-related contains wea... 32 0.46
At1g19835.1 68414.m02487 expressed protein contains Pfam PF05911... 32 0.46
At1g18190.1 68414.m02262 expressed protein similar to golgin-84 ... 32 0.46
At2g45460.1 68415.m05654 forkhead-associated domain-containing p... 31 0.61
At1g79280.1 68414.m09242 expressed protein weak similarity to Nu... 31 0.61
At5g36780.1 68418.m04406 hypothetical protein 31 1.1
At5g36690.1 68418.m04391 hypothetical protein 31 1.1
At4g23800.1 68417.m03422 high mobility group (HMG1/2) family pro... 31 1.1
At1g13220.2 68414.m01534 nuclear matrix constituent protein-rela... 31 1.1
At4g27595.1 68417.m03964 protein transport protein-related low s... 30 1.4
At5g62410.1 68418.m07832 SMC2-like condensin, putative (SMC2) (T... 30 1.9
At5g61460.1 68418.m07712 structural maintenance of chromosomes (... 30 1.9
At5g51280.1 68418.m06357 DEAD-box protein abstrakt, putative 30 1.9
At5g02470.3 68418.m00177 DP-2 transcription factor, putative (DP... 30 1.9
At5g02470.2 68418.m00176 DP-2 transcription factor, putative (DP... 30 1.9
At5g02470.1 68418.m00175 DP-2 transcription factor, putative (DP... 30 1.9
At3g10180.1 68416.m01219 kinesin motor protein-related similar t... 30 1.9
At1g68790.1 68414.m07863 expressed protein 30 1.9
At5g16730.1 68418.m01959 expressed protein weak similarity to mi... 29 2.4
At1g65010.1 68414.m07368 expressed protein similar to endosome-a... 29 4.3
At1g64320.1 68414.m07289 myosin heavy chain-related similar to m... 29 4.3
At1g63300.1 68414.m07156 expressed protein similar to Intracellu... 29 4.3
At5g26350.1 68418.m03150 hypothetical protein 28 5.7
At4g36700.1 68417.m05208 cupin family protein low similarity to ... 28 5.7
At3g58840.1 68416.m06558 expressed protein 28 5.7
At3g16000.1 68416.m02024 matrix-localized MAR DNA-binding protei... 28 5.7
At2g39300.1 68415.m04825 expressed protein ; expression supporte... 28 5.7
At1g56660.1 68414.m06516 expressed protein 28 5.7
At1g21740.1 68414.m02721 expressed protein contains Pfam domains... 28 5.7
At5g44800.1 68418.m05492 chromodomain-helicase-DNA-binding famil... 28 7.5
At5g18620.2 68418.m02206 DNA-dependent ATPase, putative similar ... 28 7.5
At5g18620.1 68418.m02205 DNA-dependent ATPase, putative similar ... 28 7.5
At3g05130.1 68416.m00557 expressed protein ; expression supporte... 28 7.5
At1g77580.1 68414.m09033 myosin heavy chain-related low similari... 28 7.5
At1g68910.1 68414.m07886 expressed protein similar to Myosin hea... 28 7.5
At1g47900.1 68414.m05334 expressed protein 28 7.5
At1g32810.1 68414.m04044 expressed protein 28 7.5
At5g27330.1 68418.m03263 expressed protein 27 9.9
At5g19960.1 68418.m02376 RNA recognition motif (RRM)-containing ... 27 9.9
At4g24580.1 68417.m03522 pleckstrin homology (PH) domain-contain... 27 9.9
At3g47460.1 68416.m05161 SMC2-like condensin, putative similar t... 27 9.9
At3g11490.1 68416.m01401 rac GTPase activating protein, putative... 27 9.9
At2g23070.1 68415.m02750 casein kinase II alpha chain, putative ... 27 9.9
At1g22260.1 68414.m02782 expressed protein 27 9.9
>At5g41790.1 68418.m05088 COP1-interactive protein 1 / CIP1 almost
identical to CIP1 (GI:836950) [Arabidopsis thaliana]
Length = 1305
Score = 34.7 bits (76), Expect = 0.065
Identities = 20/82 (24%), Positives = 42/82 (51%)
Frame = +1
Query: 4 ISKLEARIKDMELELDEEKRRHAETIKILRKKERQLKEVIIQCEEDQKNISLLQDSLEKT 183
I +LEA + +ELEL+ + R + + K ++++ Q E IS L+ ++E+
Sbjct: 747 IKELEATVATLELELESVRARIIDLETEIASKTTVVEQLEAQNREMVARISELEKTMEER 806
Query: 184 SQKVSIYKRQLAEQEGMSQQSV 249
++S ++L + + S S+
Sbjct: 807 GTELSALTQKLEDNDKQSSSSI 828
>At4g14760.1 68417.m02271 M protein repeat-containing protein contains
Pfam profile: PF02370 M protein repeat
Length = 1676
Score = 34.3 bits (75), Expect = 0.086
Identities = 21/93 (22%), Positives = 46/93 (49%), Gaps = 2/93 (2%)
Frame = +1
Query: 4 ISKLEARIKDME--LELDEEKRRHAETIKILRKKERQLKEVIIQCEEDQKNISLLQDSLE 177
+S L + D++ LE++E++RR + ++ K RQLKE+ + + +L +E
Sbjct: 1527 LSSLRISLTDLKRKLEMNEKQRRFSNADLVIVK--RQLKEMEEAVSQLENTNEILSKEIE 1584
Query: 178 KTSQKVSIYKRQLAEQEGMSQQSVTRSDDSSVN 276
+T IY++ + E+ + + + + N
Sbjct: 1585 ETGDARDIYRKVVVEKSRSGSEKIEQLQNKMQN 1617
>At5g61920.1 68418.m07773 hypothetical protein
Length = 238
Score = 33.9 bits (74), Expect = 0.11
Identities = 20/70 (28%), Positives = 38/70 (54%)
Frame = +1
Query: 4 ISKLEARIKDMELELDEEKRRHAETIKILRKKERQLKEVIIQCEEDQKNISLLQDSLEKT 183
I+K+E +K+ E E + H E ++ R++E +V + +D K + L +SLE +
Sbjct: 117 IAKMEGMVKNRENIRREVQSAHIEAHRLAREREELASKVKLGM-KDLKKVCLEAESLEAS 175
Query: 184 SQKVSIYKRQ 213
SQ++ K +
Sbjct: 176 SQELERLKEE 185
>At1g29320.1 68414.m03584 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400);
similar to meiotic recombination protein REC14
(GI:11139242) [Homo sapiens]; similar to unknown protein
GI:13623493 [Homo sapiens]
Length = 468
Score = 33.9 bits (74), Expect = 0.11
Identities = 20/75 (26%), Positives = 42/75 (56%)
Frame = +1
Query: 16 EARIKDMELELDEEKRRHAETIKILRKKERQLKEVIIQCEEDQKNISLLQDSLEKTSQKV 195
E ++ M+ E DE ++ + K KKE++ +E++ + E+D++N +D +EK K
Sbjct: 372 EEKMTIMDQEDDETEKAPVKRKK--SKKEKRSREIVFEGEDDEEN----EDEIEKAPVKT 425
Query: 196 SIYKRQLAEQEGMSQ 240
K++ +E +S+
Sbjct: 426 KKSKKEKRSREKVSE 440
>At3g54740.1 68416.m06056 expressed protein contains Pfam profile
PF04576: Protein of unknown function, DUF593
Length = 390
Score = 33.1 bits (72), Expect = 0.20
Identities = 23/79 (29%), Positives = 42/79 (53%), Gaps = 4/79 (5%)
Frame = +1
Query: 4 ISKLEARIKDMELELDEEKRRHA----ETIKILRKKERQLKEVIIQCEEDQKNISLLQDS 171
+S +KD+ LEL+EE+ A ET+ ++ + +R+ E IQ E Q + Q+
Sbjct: 30 LSSQRETVKDLHLELEEERNAAASAANETMSMILRLQREKAE--IQMEARQFKM-FAQEK 86
Query: 172 LEKTSQKVSIYKRQLAEQE 228
+ +K+S+ + L E+E
Sbjct: 87 MTHDQEKLSVLENLLYEKE 105
>At2g42480.1 68415.m05255 meprin and TRAF homology domain-containing
protein / MATH domain-containing protein similar to
ubiquitin-specific protease 12 [Arabidopsis thaliana]
GI:11993471; contains Pfam profile PF00917: MATH domain
Length = 743
Score = 33.1 bits (72), Expect = 0.20
Identities = 25/70 (35%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Frame = +1
Query: 10 KLEARIKDMEL-ELDEEKRRHAETIKILRKKERQLKEVIIQCEEDQKNISLLQ-DSLEKT 183
KLE R+K++EL ELD K + E + I KK + + + EE KN+ L+ D L+
Sbjct: 587 KLEERLKNLELMELDCLKSK-LEEVSIKNKKADADRSRVQRLEERLKNLELMDLDCLKSK 645
Query: 184 SQKVSIYKRQ 213
+ VSI ++
Sbjct: 646 LELVSIKNKK 655
Score = 32.7 bits (71), Expect = 0.26
Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = +1
Query: 4 ISKLEARIKDMEL-ELDEEKRRHAETIKILRKKERQLKEVIIQCEEDQKNISLL 162
I +LE R+K +EL ELD+ K + E +K + + + Q EE KN+ L+
Sbjct: 663 IQRLEERVKKLELMELDDLKSKLEEVSLERKKSDDAYRSRVYQLEECFKNLELM 716
>At1g77920.1 68414.m09080 bZIP family transcription factor contains
Pfam profile: PF00170 bZIP transcription factor
Length = 368
Score = 33.1 bits (72), Expect = 0.20
Identities = 17/48 (35%), Positives = 26/48 (54%)
Frame = +1
Query: 49 DEEKRRHAETIKILRKKERQLKEVIIQCEEDQKNISLLQDSLEKTSQK 192
D+ KRR A+ + RK + K + Q EE + +S L+ LEK Q+
Sbjct: 92 DKMKRRLAQNREAARKSRLRKKAYVQQLEESRLKLSQLEQELEKVKQQ 139
>At4g36520.1 68417.m05185 trichohyalin-related low similarity to
SP|Q07283 Trichohyalin {Homo sapiens}
Length = 1400
Score = 32.7 bits (71), Expect = 0.26
Identities = 20/78 (25%), Positives = 44/78 (56%)
Frame = +1
Query: 10 KLEARIKDMELELDEEKRRHAETIKILRKKERQLKEVIIQCEEDQKNISLLQDSLEKTSQ 189
+LE ++K+ E +EE RR E + ++KER++KE + EE+++ I ++ E +
Sbjct: 708 ELELQLKEA-FEKEEENRRMREAFALEQEKERRIKEA-REKEENERRIKEAREKAELEQR 765
Query: 190 KVSIYKRQLAEQEGMSQQ 243
+ +++ E++ +Q
Sbjct: 766 LKATLEQEEKERQIKERQ 783
Score = 29.1 bits (62), Expect = 3.2
Identities = 21/58 (36%), Positives = 35/58 (60%)
Frame = +1
Query: 7 SKLEARIKDMELELDEEKRRHAETIKILRKKERQLKEVIIQCEEDQKNISLLQDSLEK 180
++LE R+K LE EEK R + + + ER+ KEV+ Q E ++K L+++LE+
Sbjct: 760 AELEQRLK-ATLE-QEEKERQIKERQEREENERRAKEVLEQAENERK----LKEALEQ 811
>At5g65770.1 68418.m08276 nuclear matrix constituent protein-related
low similarity to nuclear matrix constituent protein 1
(NMCP1) [Daucus carota] GI:2190187
Length = 1042
Score = 32.3 bits (70), Expect = 0.35
Identities = 22/84 (26%), Positives = 41/84 (48%), Gaps = 1/84 (1%)
Frame = +1
Query: 16 EARIKDMELELDEEKRRHAET-IKILRKKERQLKEVIIQCEEDQKNISLLQDSLEKTSQK 192
E IK E +L EK E + L +KE+ + E +E +KN+ ++ + + +
Sbjct: 419 EVDIKQRE-DLVGEKEHDLEVQSRALAEKEKDITEKSFNLDEKEKNLVATEEDINRKTTM 477
Query: 193 VSIYKRQLAEQEGMSQQSVTRSDD 264
+ K +L + + QQS+T +D
Sbjct: 478 LEDEKERLRKLDLELQQSLTSLED 501
>At1g75150.1 68414.m08729 expressed protein ; expression supported
by MPSS
Length = 753
Score = 32.3 bits (70), Expect = 0.35
Identities = 22/96 (22%), Positives = 49/96 (51%)
Frame = +1
Query: 4 ISKLEARIKDMELELDEEKRRHAETIKILRKKERQLKEVIIQCEEDQKNISLLQDSLEKT 183
+ K EA +D + + DEE HA ++++ KK +++ ++ +ED +S + +EK
Sbjct: 517 VQKPEAN-EDEDEDEDEEDPSHANSMRMTIKKIKEMIPLMF-TDEDDVYVSSDDEEMEKK 574
Query: 184 SQKVSIYKRQLAEQEGMSQQSVTRSDDSSVNWKPPK 291
+ +YK+ + + S + S++ + K P+
Sbjct: 575 LLQQRLYKKMELKAKSSSSTADENSEEILRHIKKPE 610
>At1g04600.1 68414.m00454 myosin, putative similar to myosin
(GI:499047) [Arabidopsis thaliana]
Length = 1730
Score = 32.3 bits (70), Expect = 0.35
Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 4/61 (6%)
Frame = +1
Query: 10 KLEARIKDMELELDEEKRRHAETI-KILRKKERQLK---EVIIQCEEDQKNISLLQDSLE 177
KL+A + ME ++DE R+H ET I K + + E++ E + + + L SLE
Sbjct: 1056 KLKALVSSMEEKIDELDRKHDETSPNITEKLKEDVSFDYEIVSNLEAENERLKALVGSLE 1115
Query: 178 K 180
K
Sbjct: 1116 K 1116
>At4g31340.1 68417.m04445 myosin heavy chain-related contains weak
similarity to Myosin heavy chain, nonmuscle type A
(Cellular myosin heavy chain, type A) (Nonmuscle myosin
heavy chain-A) (NMMHC-A) (Swiss-Prot:P35579) [Homo
sapiens]
Length = 437
Score = 31.9 bits (69), Expect = 0.46
Identities = 23/85 (27%), Positives = 41/85 (48%)
Frame = +1
Query: 4 ISKLEARIKDMELELDEEKRRHAETIKILRKKERQLKEVIIQCEEDQKNISLLQDSLEKT 183
+ +L A+I+ +E ++DE+ R +++ +KE+ LKE + Q +S LQ
Sbjct: 43 LDQLNAKIRALESQIDEKTREVQGKDEVVAEKEKLLKEREDKIASLQTEVSSLQKKGSSD 102
Query: 184 SQKVSIYKRQLAEQEGMSQQSVTRS 258
S K + K Q E Q V ++
Sbjct: 103 SAK-QLGKAQARADELEKQVEVLKN 126
>At1g19835.1 68414.m02487 expressed protein contains Pfam PF05911:
Plant protein of unknown function (DUF869)
Length = 982
Score = 31.9 bits (69), Expect = 0.46
Identities = 20/74 (27%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Frame = +1
Query: 4 ISKLEARIKDMELELDEEKRRHAETIKILRKKERQLKEVIIQCEEDQKNISLLQDS-LEK 180
++ L+ +I+++E EL +EK H E + ++ E QL+ C N S+++D K
Sbjct: 808 LTSLKGKIENLEDELHDEKENHREALAKCQELEEQLQRNNQNC----PNCSVIEDDPKSK 863
Query: 181 TSQKVSIYKRQLAE 222
+++ +LAE
Sbjct: 864 QDNELAAAAEKLAE 877
Score = 27.9 bits (59), Expect = 7.5
Identities = 17/70 (24%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Frame = +1
Query: 4 ISKLEARIKDMELELDEEKRRHAETIKILRKKERQLKEVIIQCEEDQKNISLLQDSLEK- 180
++KLE +IKD++L+L ++++ + +E + E+ + S L+ LE
Sbjct: 58 VTKLEDQIKDLDLKLSTANADIVAKEVLVKQHSKVAEEAVTGWEKAEAEASALKTHLETI 117
Query: 181 TSQKVSIYKR 210
T K+++ R
Sbjct: 118 TLAKLTVEDR 127
>At1g18190.1 68414.m02262 expressed protein similar to golgin-84
{Homo sapiens} (GI:4191344)
Length = 668
Score = 31.9 bits (69), Expect = 0.46
Identities = 24/92 (26%), Positives = 41/92 (44%)
Frame = +1
Query: 7 SKLEARIKDMELELDEEKRRHAETIKILRKKERQLKEVIIQCEEDQKNISLLQDSLEKTS 186
+KLEA I+ M EL+E E L+++ QL + +IQ Q + L
Sbjct: 491 TKLEADIEMMRKELEEPTEVEIE----LKRRLNQLTDHLIQ---KQSQVEALSSEKATIL 543
Query: 187 QKVSIYKRQLAEQEGMSQQSVTRSDDSSVNWK 282
++ R + E +GMS + D + +W+
Sbjct: 544 FRIEAVSRLIEENKGMSATEASSQDLEAGDWE 575
>At2g45460.1 68415.m05654 forkhead-associated domain-containing
protein / FHA domain-containing protein
Length = 915
Score = 31.5 bits (68), Expect = 0.61
Identities = 25/86 (29%), Positives = 46/86 (53%), Gaps = 6/86 (6%)
Frame = +1
Query: 4 ISKLEARIKDMELELDEEKRRHAETIKILRKKERQLKEVIIQCEEDQKNISL----LQDS 171
I++L+A I ++E EE +R ++ + ER+ +EVI + +E +K S+ L
Sbjct: 377 IAELKAAIHRCQIEAQEELKRFSDAAM---RHEREQQEVINKMKESEKEKSMQVETLMSK 433
Query: 172 LEKTSQKV--SIYKRQLAEQEGMSQQ 243
LE T Q++ S + +L E + +Q
Sbjct: 434 LEDTRQRLVCSENRNRLLEAQVSEEQ 459
>At1g79280.1 68414.m09242 expressed protein weak similarity to
Nucleoprotein TPR (Swiss-Prot:P12270) [Homo sapiens]
Length = 2111
Score = 31.5 bits (68), Expect = 0.61
Identities = 14/47 (29%), Positives = 25/47 (53%)
Frame = +1
Query: 1 IISKLEARIKDMELELDEEKRRHAETIKILRKKERQLKEVIIQCEED 141
+I LEAR+ +E E + T ++L K+ LK+ + +CE +
Sbjct: 306 VIKALEARLSQVESSYKERLDKEVSTKQLLEKENGDLKQKLEKCEAE 352
>At5g36780.1 68418.m04406 hypothetical protein
Length = 576
Score = 30.7 bits (66), Expect = 1.1
Identities = 17/78 (21%), Positives = 40/78 (51%)
Frame = +1
Query: 16 EARIKDMELELDEEKRRHAETIKILRKKERQLKEVIIQCEEDQKNISLLQDSLEKTSQKV 195
+ RIKD +L++ EK+ +TIK K + +E + N+ + ++T V
Sbjct: 346 DGRIKDADLQIFWEKKVPVKTIKRSEKVHKMNREDSSSNSSEDGNV-ITDKRKKETKSDV 404
Query: 196 SIYKRQLAEQEGMSQQSV 249
+Y++ ++E + ++++
Sbjct: 405 IVYEKPKKKEEEIDEEAL 422
>At5g36690.1 68418.m04391 hypothetical protein
Length = 576
Score = 30.7 bits (66), Expect = 1.1
Identities = 17/78 (21%), Positives = 40/78 (51%)
Frame = +1
Query: 16 EARIKDMELELDEEKRRHAETIKILRKKERQLKEVIIQCEEDQKNISLLQDSLEKTSQKV 195
+ RIKD +L++ EK+ +TIK K + +E + N+ + ++T V
Sbjct: 346 DGRIKDADLQIFWEKKVPVKTIKRSEKVHKMNREDSSSNSSEDGNV-ITDKRKKETKSDV 404
Query: 196 SIYKRQLAEQEGMSQQSV 249
+Y++ ++E + ++++
Sbjct: 405 IVYEKPKKKEEEIDEEAL 422
>At4g23800.1 68417.m03422 high mobility group (HMG1/2) family
protein similar to HMG2B [Homo sapiens] GI:32335;
contains Pfam profile PF00505: HMG (high mobility group)
box
Length = 456
Score = 30.7 bits (66), Expect = 1.1
Identities = 24/96 (25%), Positives = 48/96 (50%)
Frame = +1
Query: 4 ISKLEARIKDMELELDEEKRRHAETIKILRKKERQLKEVIIQCEEDQKNISLLQDSLEKT 183
+ +++ ++ M++E D+ + E +ILRKKE +L+ E+++ + L K
Sbjct: 48 LMEMQTMLEKMKIEKDKTEELLKEKDEILRKKEEELE--TRDAEQEKLKVEL------KK 99
Query: 184 SQKVSIYKRQLAEQEGMSQQSVTRSDDSSVNWKPPK 291
QK+ +K + G Q S+T+++ N K K
Sbjct: 100 LQKMKEFKPNMTFACG--QSSLTQAEQEKANKKKKK 133
>At1g13220.2 68414.m01534 nuclear matrix constituent protein-related
similar to nuclear matrix constituent protein 1 (NMCP1)
[Daucus carota] GI:2190187
Length = 1128
Score = 30.7 bits (66), Expect = 1.1
Identities = 21/102 (20%), Positives = 51/102 (50%), Gaps = 8/102 (7%)
Frame = +1
Query: 1 IISKLEARIKDMELELDEEKRRHAETI-----KILRKKERQLKEVIIQCE---EDQKNIS 156
+I LE +++E+EL E K + + + + K+ +L ++ Q + + + +
Sbjct: 640 VIDDLEMMRRNLEIELQERKEQDEKDLLDRMAQFEDKRMAELSDINHQKQALNREMEEMM 699
Query: 157 LLQDSLEKTSQKVSIYKRQLAEQEGMSQQSVTRSDDSSVNWK 282
+ +L+K S++++ +K +L EQ+ ++ S+N K
Sbjct: 700 SKRSALQKESEEIAKHKDKLKEQQVEMHNDISELSTLSINLK 741
>At4g27595.1 68417.m03964 protein transport protein-related low
similarity to SP|P25386 Intracellular protein transport
protein USO1 {Saccharomyces cerevisiae}
Length = 1212
Score = 30.3 bits (65), Expect = 1.4
Identities = 21/94 (22%), Positives = 48/94 (51%), Gaps = 8/94 (8%)
Frame = +1
Query: 16 EARIKDMELELDEEKRRHAETIKILRKKERQLKEVIIQCEEDQKNIS--------LLQDS 171
+A+++ EL+EE + E +++ + +LKE +++ E++ KN + + S
Sbjct: 583 DAKMQTNRKELEEEIKDLQEIVEVAKADSMKLKESLVEKEDELKNTAAENRKLREMEVSS 642
Query: 172 LEKTSQKVSIYKRQLAEQEGMSQQSVTRSDDSSV 273
++K Q +S K L ++E Q + +++ V
Sbjct: 643 IDKIDQ-LSKVKESLVDKETKLQNIIQEAEELRV 675
>At5g62410.1 68418.m07832 SMC2-like condensin, putative (SMC2)
(TITAN3) very strong similarity to SMC2-like condensin
(TITAN3) [Arabidopsis thaliana] GI:14279543; contains
Pfam profiles PF02483: SMC family C-terminal domain,
PF02463: RecF/RecN/SMC N terminal domain
Length = 1175
Score = 29.9 bits (64), Expect = 1.9
Identities = 16/70 (22%), Positives = 35/70 (50%)
Frame = +1
Query: 16 EARIKDMELELDEEKRRHAETIKILRKKERQLKEVIIQCEEDQKNISLLQDSLEKTSQKV 195
E R+KD+E + K + K L+ E + ++++++ E ++ S L+ L ++
Sbjct: 786 EGRLKDLEKNIKTIKAQMQAASKDLKSHENEKEKLVMEEEAMKQEQSSLESHLTSLETQI 845
Query: 196 SIYKRQLAEQ 225
S ++ EQ
Sbjct: 846 STLTSEVDEQ 855
>At5g61460.1 68418.m07712 structural maintenance of chromosomes
(SMC) family protein very strong similarity to SMC-like
protein (MIM) [Arabidopsis thaliana] GI:5880614;
contains Pfam profile PF02463: RecF/RecN/SMC N terminal
domain
Length = 1057
Score = 29.9 bits (64), Expect = 1.9
Identities = 19/84 (22%), Positives = 43/84 (51%), Gaps = 1/84 (1%)
Frame = +1
Query: 1 IISKLEARIKDMELELDEEKRRHAETIKILRKKERQLKEVIIQCEEDQKNISLLQDSLEK 180
+ + + +IKD+E+E +E+ + ++ R+ E L+E+ ++ + +K+ S + L
Sbjct: 632 LCASFDDQIKDLEIEASKEQNEINQCMRRKREAEENLEELELKVRQLKKHRSQAEKVLTT 691
Query: 181 TSQKVSIYKRQL-AEQEGMSQQSV 249
++ K + AE E + SV
Sbjct: 692 KELEMHDLKNTVAAEIEALPSSSV 715
>At5g51280.1 68418.m06357 DEAD-box protein abstrakt, putative
Length = 591
Score = 29.9 bits (64), Expect = 1.9
Identities = 24/93 (25%), Positives = 44/93 (47%), Gaps = 1/93 (1%)
Frame = +1
Query: 13 LEARIKDMELELDEEKRRHAETIKILRKKERQLKEVIIQCEEDQKNISLLQDSLEKTSQK 192
L+ + K ELE + +K + AE L + QLK + + ++ I ++ +E S K
Sbjct: 29 LQRKGKASELEEEADKEKLAEAKPSLLVQATQLKRDVPEVSATEQIILQEKEMMEHLSDK 88
Query: 193 VSIYK-RQLAEQEGMSQQSVTRSDDSSVNWKPP 288
++ R+LA + +T ++ WKPP
Sbjct: 89 KTLMSVRELA-------KGITYTEPLLTGWKPP 114
>At5g02470.3 68418.m00177 DP-2 transcription factor, putative (DPA)
similar to Swiss-Prot:Q14188 transcription factor DP-2
(E2F dimerization partner 2) [Homo sapiens]
Length = 292
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/65 (21%), Positives = 36/65 (55%)
Frame = +1
Query: 94 KKERQLKEVIIQCEEDQKNISLLQDSLEKTSQKVSIYKRQLAEQEGMSQQSVTRSDDSSV 273
KKE + K + I C++D + + + ++ + + QK + + ++L E+ + ++R+ + V
Sbjct: 126 KKEIRWKGLPITCKKDVEEVKMDRNKVMSSVQKKAAFLKELREKVSSLESLMSRNQEMVV 185
Query: 274 NWKPP 288
+ P
Sbjct: 186 KTQGP 190
>At5g02470.2 68418.m00176 DP-2 transcription factor, putative (DPA)
similar to Swiss-Prot:Q14188 transcription factor DP-2
(E2F dimerization partner 2) [Homo sapiens]
Length = 292
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/65 (21%), Positives = 36/65 (55%)
Frame = +1
Query: 94 KKERQLKEVIIQCEEDQKNISLLQDSLEKTSQKVSIYKRQLAEQEGMSQQSVTRSDDSSV 273
KKE + K + I C++D + + + ++ + + QK + + ++L E+ + ++R+ + V
Sbjct: 126 KKEIRWKGLPITCKKDVEEVKMDRNKVMSSVQKKAAFLKELREKVSSLESLMSRNQEMVV 185
Query: 274 NWKPP 288
+ P
Sbjct: 186 KTQGP 190
>At5g02470.1 68418.m00175 DP-2 transcription factor, putative (DPA)
similar to Swiss-Prot:Q14188 transcription factor DP-2
(E2F dimerization partner 2) [Homo sapiens]
Length = 292
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/65 (21%), Positives = 36/65 (55%)
Frame = +1
Query: 94 KKERQLKEVIIQCEEDQKNISLLQDSLEKTSQKVSIYKRQLAEQEGMSQQSVTRSDDSSV 273
KKE + K + I C++D + + + ++ + + QK + + ++L E+ + ++R+ + V
Sbjct: 126 KKEIRWKGLPITCKKDVEEVKMDRNKVMSSVQKKAAFLKELREKVSSLESLMSRNQEMVV 185
Query: 274 NWKPP 288
+ P
Sbjct: 186 KTQGP 190
>At3g10180.1 68416.m01219 kinesin motor protein-related similar to
centromere protein E GB:4502781 [Homo sapiens]
Length = 1348
Score = 29.9 bits (64), Expect = 1.9
Identities = 20/88 (22%), Positives = 43/88 (48%)
Frame = +1
Query: 10 KLEARIKDMELELDEEKRRHAETIKILRKKERQLKEVIIQCEEDQKNISLLQDSLEKTSQ 189
K E + + LEL+EEK+ A+ ++L+++ +++K + ++ QD +K +
Sbjct: 378 KSELERERIALELEEEKKAQAQRERVLQEQAKKIKNLSSMVLLSNRDEKREQDHFKKGKR 437
Query: 190 KVSIYKRQLAEQEGMSQQSVTRSDDSSV 273
+ + +L+ QS S SS+
Sbjct: 438 RDTWCIGKLSRDSTSEDQSNVLSRGSSL 465
>At1g68790.1 68414.m07863 expressed protein
Length = 1085
Score = 29.9 bits (64), Expect = 1.9
Identities = 17/74 (22%), Positives = 38/74 (51%)
Frame = +1
Query: 4 ISKLEARIKDMELELDEEKRRHAETIKILRKKERQLKEVIIQCEEDQKNISLLQDSLEKT 183
+ K E +K E +LD + E K L+ +E++L + ED++ + L+D +E+
Sbjct: 410 LEKKEEGVKKKEKDLDARLKTVKEKEKALKAEEKKLHMENERLLEDKECLRKLKDEIEEI 469
Query: 184 SQKVSIYKRQLAEQ 225
+ + + ++ E+
Sbjct: 470 GTETTKQESRIREE 483
>At5g16730.1 68418.m01959 expressed protein weak similarity to
microtubule binding protein D-CLIP-190 [Drosophila
melanogaster] GI:2773363, SMC2-like condensin
[Arabidopsis thaliana] GI:14279543
Length = 853
Score = 29.5 bits (63), Expect = 2.4
Identities = 24/90 (26%), Positives = 41/90 (45%), Gaps = 3/90 (3%)
Frame = +1
Query: 4 ISKLEARIKDMELE---LDEEKRRHAETIKILRKKERQLKEVIIQCEEDQKNISLLQDSL 174
+ K+E + M E LD +R E KKE Q K+ + + EE+ I LQ++L
Sbjct: 556 VKKMEEDVASMGKEMNRLDNLLKRTEEEADAAWKKEAQTKDSLKEVEEE---IVYLQETL 612
Query: 175 EKTSQKVSIYKRQLAEQEGMSQQSVTRSDD 264
+ + K L ++E Q + ++D
Sbjct: 613 GEAKAESMKLKENLLDKETEFQNVIHENED 642
Score = 29.1 bits (62), Expect = 3.2
Identities = 20/66 (30%), Positives = 35/66 (53%)
Frame = +1
Query: 10 KLEARIKDMELELDEEKRRHAETIKILRKKERQLKEVIIQCEEDQKNISLLQDSLEKTSQ 189
K EA+ KD E++EE ET+ + + +LKE ++ E + +N+ + L K +
Sbjct: 589 KKEAQTKDSLKEVEEEIVYLQETLGEAKAESMKLKENLLDKETEFQNVIHENEDL-KAKE 647
Query: 190 KVSIYK 207
VS+ K
Sbjct: 648 DVSLKK 653
>At1g65010.1 68414.m07368 expressed protein similar to
endosome-associated protein (GI:1016368) [Homo sapiens];
similar to Centromeric protein E (CENP-E protein)
(Swiss-Prot:Q02224) [Homo sapiens]
Length = 1318
Score = 28.7 bits (61), Expect = 4.3
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 8/67 (11%)
Frame = +1
Query: 67 HAETIKILRKKERQLKEVIIQCEEDQ-----KNISLLQDSLEKTS---QKVSIYKRQLAE 222
HAE +IL + +LK ++ EE + + +S L+ +E +KVSI + L E
Sbjct: 197 HAEKAEILASELGRLKALLGSKEEKEAIEGNEIVSKLKSEIELLRGELEKVSILESSLKE 256
Query: 223 QEGMSQQ 243
QEG+ +Q
Sbjct: 257 QEGLVEQ 263
>At1g64320.1 68414.m07289 myosin heavy chain-related similar to
myosin heavy chain (GI:4249703) [Rana catesbeiana];
similar to smooth muscle myosin heavy chain SM2
(GI:2352945) [Homo sapiens]
Length = 476
Score = 28.7 bits (61), Expect = 4.3
Identities = 16/84 (19%), Positives = 42/84 (50%)
Frame = +1
Query: 13 LEARIKDMELELDEEKRRHAETIKILRKKERQLKEVIIQCEEDQKNISLLQDSLEKTSQK 192
L+ ++ +E +L EE + K+L K E ++KE+ ++ + + + L + + ++
Sbjct: 390 LKEKLSKLEKKLAEEGTEKLKLAKVLSKFETRIKELEVKVKGREVELLSLGEEKREAIRQ 449
Query: 193 VSIYKRQLAEQEGMSQQSVTRSDD 264
+ I ++ ++S+ + DD
Sbjct: 450 LCILVDYHQDRYNQLKKSILKVDD 473
Score = 27.9 bits (59), Expect = 7.5
Identities = 15/85 (17%), Positives = 46/85 (54%)
Frame = +1
Query: 4 ISKLEARIKDMELELDEEKRRHAETIKILRKKERQLKEVIIQCEEDQKNISLLQDSLEKT 183
++ ++ ++ + + DE + + + ++ + + + QLK + + EE++ +S D L+
Sbjct: 98 VNGMKHELESLRSQKDESEAKLEKKVEEVTETKMQLKSLKEETEEERNRLSEEIDQLKGE 157
Query: 184 SQKVSIYKRQLAEQEGMSQQSVTRS 258
+Q + R+++E + + + T+S
Sbjct: 158 NQ---MLHRRISELDSLHMEMKTKS 179
>At1g63300.1 68414.m07156 expressed protein similar to Intracellular
protein transport protein USO1 (Swiss-Prot:P25386)
[Saccharomyces cerevisiae]; similar to Myosin II heavy
chain, non muscle (Swiss-Prot:P08799) [Dictyostelium
discoideum]
Length = 1029
Score = 28.7 bits (61), Expect = 4.3
Identities = 16/67 (23%), Positives = 32/67 (47%)
Frame = +1
Query: 43 ELDEEKRRHAETIKILRKKERQLKEVIIQCEEDQKNISLLQDSLEKTSQKVSIYKRQLAE 222
E+D +KR + L ++ + LKE I +++Q ++ L + E + K+ + E
Sbjct: 711 EIDNQKRHEEDVTANLNQEIKILKEEIENLKKNQDSLMLQAEQAENLRVDLEKTKKSVME 770
Query: 223 QEGMSQQ 243
E Q+
Sbjct: 771 AEASLQR 777
>At5g26350.1 68418.m03150 hypothetical protein
Length = 126
Score = 28.3 bits (60), Expect = 5.7
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = +1
Query: 52 EEKRRHAETIKILRKKERQLKEVIIQCEEDQKNI 153
EEK + E K L K+++QL+E Q EE++K +
Sbjct: 55 EEKNKLEEEKKKLEKEKKQLEEEKKQLEEEKKQL 88
>At4g36700.1 68417.m05208 cupin family protein low similarity to
preproMP27-MP32 from Cucurbita cv. Kurokawa Amakuri
[GI:691752]; contains Pfam profile PF00190: Cupin
Length = 522
Score = 28.3 bits (60), Expect = 5.7
Identities = 17/48 (35%), Positives = 29/48 (60%)
Frame = +1
Query: 4 ISKLEARIKDMELELDEEKRRHAETIKILRKKERQLKEVIIQCEEDQK 147
I KL+ I+ +++ DE KRRH E K + +R+ +E + EE++K
Sbjct: 443 IEKLKVEIERKKID-DERKRRHDERKKEEEEAKREEEERRKREEEEEK 489
>At3g58840.1 68416.m06558 expressed protein
Length = 318
Score = 28.3 bits (60), Expect = 5.7
Identities = 18/73 (24%), Positives = 40/73 (54%), Gaps = 7/73 (9%)
Frame = +1
Query: 25 IKDMELELDEEKRRHAETIKILRKKERQLKEVIIQCEEDQKNISLLQDSL-------EKT 183
+KD+E E+++ + I+ ++++ L+ + + E + +S L D L +KT
Sbjct: 60 MKDVEAEMNQRFGEMEKEIEEYEEEKKALEAISTRAVELETEVSNLHDDLITSLNGVDKT 119
Query: 184 SQKVSIYKRQLAE 222
+++V+ K+ LAE
Sbjct: 120 AEEVAELKKALAE 132
>At3g16000.1 68416.m02024 matrix-localized MAR DNA-binding
protein-related similar to matrix-localized MAR DNA
binding protein MFP1 GI:1771158 from [Lycopersicon
esculentum]
Length = 726
Score = 28.3 bits (60), Expect = 5.7
Identities = 20/71 (28%), Positives = 33/71 (46%)
Frame = +1
Query: 1 IISKLEARIKDMELELDEEKRRHAETIKILRKKERQLKEVIIQCEEDQKNISLLQDSLEK 180
++ L+ RI + LEL + + + L KKE +LKE + Q + L + LE
Sbjct: 263 LVEGLQDRINLLSLELKDSEEKAQRFNASLAKKEAELKE--LNSIYTQTSRDLAEAKLEI 320
Query: 181 TSQKVSIYKRQ 213
QK + + Q
Sbjct: 321 KQQKEELIRTQ 331
>At2g39300.1 68415.m04825 expressed protein ; expression supported
by MPSS
Length = 768
Score = 28.3 bits (60), Expect = 5.7
Identities = 16/62 (25%), Positives = 31/62 (50%)
Frame = +1
Query: 10 KLEARIKDMELELDEEKRRHAETIKILRKKERQLKEVIIQCEEDQKNISLLQDSLEKTSQ 189
K + I ME+ L E + K+L ++E KEV +C + ++ ++ L+K +
Sbjct: 668 KKDENINRMEINLQEAAKELLTLPKVLEEREEMWKEV-KECRKRNMDLESEKEMLKKKVE 726
Query: 190 KV 195
K+
Sbjct: 727 KL 728
>At1g56660.1 68414.m06516 expressed protein
Length = 522
Score = 28.3 bits (60), Expect = 5.7
Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Frame = +1
Query: 37 ELELDEEKRRHAETIKILRKKERQLKEVIIQ--CEEDQKNISLLQDSLEKTSQKVSIYKR 210
E E+D+E H E K K + + KE +I CE++ K+ D +T QK + K
Sbjct: 311 EQEMDDEAADHKEGKKKKNKDKAKKKETVIDEVCEKETKD---KDDDEGETKQKKNKKKE 367
Query: 211 QLAEQ 225
+ +E+
Sbjct: 368 KKSEK 372
>At1g21740.1 68414.m02721 expressed protein contains Pfam domains,
PF04782: Protein of unknown function (DUF632) and
PF04783: Protein of unknown function (DUF630)
Length = 953
Score = 28.3 bits (60), Expect = 5.7
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +1
Query: 4 ISKLEARIKDMELELDEEKRRHAETIKIL 90
+ L+ + M +L+EE+ RH ETIK++
Sbjct: 880 LDDLKVDLDSMRKKLEEERARHKETIKLV 908
>At5g44800.1 68418.m05492 chromodomain-helicase-DNA-binding family
protein / CHD family protein similar to chromatin
remodeling factor CHD3 (PICKLE) [Arabidopsis thaliana]
GI:6478518; contains Pfam profiles PF00271: Helicase
conserved C-terminal domain, PF00176: SNF2 family
N-terminal domain, PF00628: PHD-finger, PF00385: 'chromo'
(CHRromatin Organization MOdifier)
Length = 2228
Score = 27.9 bits (59), Expect = 7.5
Identities = 19/71 (26%), Positives = 33/71 (46%)
Frame = +1
Query: 49 DEEKRRHAETIKILRKKERQLKEVIIQCEEDQKNISLLQDSLEKTSQKVSIYKRQLAEQE 228
++EK E K R LKE + E QKN+ ++S+E++ ++ Q+ E
Sbjct: 1362 EDEKEPEPELKKEYTPAGRALKEKFTKLRERQKNLIARRNSVEESLPSGNV--DQVTEVA 1419
Query: 229 GMSQQSVTRSD 261
++S T D
Sbjct: 1420 NQDEESPTSMD 1430
>At5g18620.2 68418.m02206 DNA-dependent ATPase, putative similar to
DNA-dependent ATPase SNF2H [Mus musculus] GI:14028669;
contains Pfam profiles PF00271: Helicase conserved
C-terminal domain, PF00176: SNF2 family N-terminal
domain, PF00249: Myb-like DNA-binding domain
Length = 1072
Score = 27.9 bits (59), Expect = 7.5
Identities = 14/64 (21%), Positives = 30/64 (46%)
Frame = +1
Query: 31 DMELELDEEKRRHAETIKILRKKERQLKEVIIQCEEDQKNISLLQDSLEKTSQKVSIYKR 210
+ME + +EE R+A+ ++ K+ +I E + IS + ++ +K+ Y+
Sbjct: 876 EMEGKTEEEVERYAQVFQVRYKELNDYDRIIKNIERGEARISRKDEIMKAIGKKLDRYRN 935
Query: 211 QLAE 222
E
Sbjct: 936 PWLE 939
>At5g18620.1 68418.m02205 DNA-dependent ATPase, putative similar to
DNA-dependent ATPase SNF2H [Mus musculus] GI:14028669;
contains Pfam profiles PF00271: Helicase conserved
C-terminal domain, PF00176: SNF2 family N-terminal
domain, PF00249: Myb-like DNA-binding domain
Length = 1069
Score = 27.9 bits (59), Expect = 7.5
Identities = 14/64 (21%), Positives = 30/64 (46%)
Frame = +1
Query: 31 DMELELDEEKRRHAETIKILRKKERQLKEVIIQCEEDQKNISLLQDSLEKTSQKVSIYKR 210
+ME + +EE R+A+ ++ K+ +I E + IS + ++ +K+ Y+
Sbjct: 876 EMEGKTEEEVERYAQVFQVRYKELNDYDRIIKNIERGEARISRKDEIMKAIGKKLDRYRN 935
Query: 211 QLAE 222
E
Sbjct: 936 PWLE 939
>At3g05130.1 68416.m00557 expressed protein ; expression supported
by MPSS
Length = 634
Score = 27.9 bits (59), Expect = 7.5
Identities = 15/67 (22%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Frame = +1
Query: 4 ISKLEARIKDMELELDEEKRRHAETIKILRKKERQLKEVIIQCEE---DQKNISLLQDSL 174
++++E R ++ + LDEEKR + + K E+ + + + + E+ ++K++ ++ L
Sbjct: 434 LAQVELRREEADKALDEEKRNGEDLKAEVLKSEKMVAKTLEELEKVKIERKSLFSAKNDL 493
Query: 175 EKTSQKV 195
E S+ +
Sbjct: 494 ESQSESL 500
>At1g77580.1 68414.m09033 myosin heavy chain-related low similarity
to SP|P08799 Myosin II heavy chain, non muscle
{Dictyostelium discoideum}
Length = 629
Score = 27.9 bits (59), Expect = 7.5
Identities = 18/83 (21%), Positives = 44/83 (53%), Gaps = 4/83 (4%)
Frame = +1
Query: 1 IISKLEARIKDMELELDEEKRRHAETIKILR---KKER-QLKEVIIQCEEDQKNISLLQD 168
++++L+A ++ + ++ + + + I+ L +KER E+ +CE ++ ISL ++
Sbjct: 547 LVNELKAEVESQTIAMEADAKTKSAKIESLEEDMRKERFAFDELRRKCEALEEEISLHKE 606
Query: 169 SLEKTSQKVSIYKRQLAEQEGMS 237
+ K+ K K+ + G+S
Sbjct: 607 NSIKSENKEPKIKQVCLQSSGVS 629
>At1g68910.1 68414.m07886 expressed protein similar to Myosin heavy
chain, nonmuscle type B (Cellular myosin heavy chain,
type B) (Nonmuscle myosin heavy chain-B) (NMMHC-B)
(Swiss-Prot:Q27991) [Bos taurus]; contains 1
transmembrane domain
Length = 627
Score = 27.9 bits (59), Expect = 7.5
Identities = 19/79 (24%), Positives = 38/79 (48%)
Frame = +1
Query: 25 IKDMELELDEEKRRHAETIKILRKKERQLKEVIIQCEEDQKNISLLQDSLEKTSQKVSIY 204
+ +ME + K E E ++KE+ E + ++ L+D+ +K ++KV+
Sbjct: 345 LAEMENANESVKENLFEAESRAESGEAKIKELDAANLELTEELNFLKDADDKKTKKVNSL 404
Query: 205 KRQLAEQEGMSQQSVTRSD 261
++Q+ E E Q S S+
Sbjct: 405 EKQVRELEVQVQNSKVSSE 423
>At1g47900.1 68414.m05334 expressed protein
Length = 1054
Score = 27.9 bits (59), Expect = 7.5
Identities = 19/76 (25%), Positives = 39/76 (51%), Gaps = 3/76 (3%)
Frame = +1
Query: 4 ISKLEARIKDMELELDEEKRRHAETIKILRKKERQL---KEVIIQCEEDQKNISLLQDSL 174
+++L+ +I+ +E EL++EK H E I + E + + + E+D++ D
Sbjct: 866 VNQLKEKIQKLENELEDEKCNHQEAILRCHELEEHIQRHRNTSLVAEDDEE-----ADIK 920
Query: 175 EKTSQKVSIYKRQLAE 222
K +++S +LAE
Sbjct: 921 SKQERELSAAAEKLAE 936
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/47 (25%), Positives = 29/47 (61%)
Frame = +1
Query: 13 LEARIKDMELELDEEKRRHAETIKILRKKERQLKEVIIQCEEDQKNI 153
LE+R D+E+++++ K + + L ++ +E I++C E +++I
Sbjct: 855 LESRAADLEIDVNQLKEKIQKLENELEDEKCNHQEAILRCHELEEHI 901
>At1g32810.1 68414.m04044 expressed protein
Length = 654
Score = 27.9 bits (59), Expect = 7.5
Identities = 21/80 (26%), Positives = 33/80 (41%)
Frame = +3
Query: 75 NHQDPPQEGAST*GGHHSVRGGSEEHLSPPRFFGENLPESQHLQKAVG*TRGHVAAERDP 254
+H D G+S + GGSE + P +LP+ Q + G + RD
Sbjct: 46 DHMDSKVSGSSA----SQISGGSELNKMTP---SSSLPDDHKPQSVEMVSEGISSGNRDR 98
Query: 255 VRRFQRELEAAEDRADVAES 314
+REL +E D+ E+
Sbjct: 99 AIELKRELVVSETEKDIQET 118
>At5g27330.1 68418.m03263 expressed protein
Length = 628
Score = 27.5 bits (58), Expect = 9.9
Identities = 20/86 (23%), Positives = 46/86 (53%), Gaps = 2/86 (2%)
Frame = +1
Query: 10 KLEARIKDMELELDEEKRRHAETIKILRKKERQLKEVIIQCEEDQKNISLLQDSLEKTSQ 189
++E +K+ ++E++ +R E I L KK + E++ ++++ + LEK+
Sbjct: 257 EIEGVVKE-KMEVEMVRRDQREMIVELEKKLGDMNEIVESLTKEREGLRGQVVGLEKSLD 315
Query: 190 KVSIYKRQLAEQ--EGMSQQSVTRSD 261
+V+ + AEQ E + +++V S+
Sbjct: 316 EVTEEAKARAEQINELVKEKTVKESE 341
>At5g19960.1 68418.m02376 RNA recognition motif (RRM)-containing
protein low similarity to glycine-rich RNA-binding
protein [Euphorbia esula] GI:2645699; contains
INTERPRO:IPR000504 RNA-binding region RNP-1 (RNA
recognition motif) (RRM) domain
Length = 337
Score = 27.5 bits (58), Expect = 9.9
Identities = 19/56 (33%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Frame = +1
Query: 58 KRRHAETIKILRKKER-QLKEVIIQCEEDQKNISLLQDSLEKTSQKVSIYKRQLAE 222
K R A +++ +ER ++KEV+ C E QK L+D L + VS +++LA+
Sbjct: 238 KMREALRDEVMVMEERLEVKEVV--CSELQKKSKRLEDLLINEKKLVSQRRKELAK 291
>At4g24580.1 68417.m03522 pleckstrin homology (PH) domain-containing
protein-related / RhoGAP domain-containing protein
contains Pfam domain, PF00620: RhoGAP domain
Length = 902
Score = 27.5 bits (58), Expect = 9.9
Identities = 20/89 (22%), Positives = 40/89 (44%)
Frame = +1
Query: 4 ISKLEARIKDMELELDEEKRRHAETIKILRKKERQLKEVIIQCEEDQKNISLLQDSLEKT 183
I+KLE ++ D+E L + + + K+ R+L E + +E QK+ + +
Sbjct: 682 IAKLEHKVDDLENRLGHHDGKASGSTHSASKESRKLPEHNAKMKEKQKDTEAASTHISER 741
Query: 184 SQKVSIYKRQLAEQEGMSQQSVTRSDDSS 270
S S L + +G ++++ T S
Sbjct: 742 S--TSKTGNILQDGQGAARENETEKQQDS 768
>At3g47460.1 68416.m05161 SMC2-like condensin, putative similar to
SMC2-like condensin (TITAN3) [Arabidopsis thaliana]
GI:14279543; contains Pfam profiles PF02483: SMC family
C-terminal domain, PF02463: RecF/RecN/SMC N terminal
domain
Length = 1171
Score = 27.5 bits (58), Expect = 9.9
Identities = 18/87 (20%), Positives = 38/87 (43%)
Frame = +1
Query: 16 EARIKDMELELDEEKRRHAETIKILRKKERQLKEVIIQCEEDQKNISLLQDSLEKTSQKV 195
E R+KD+E + K R + K L+ E + ++++ E + S L+ L ++
Sbjct: 783 EGRLKDLEKNIKTLKARIQASSKDLKGHENVRERLVMEQEAVTQEQSYLKSQLTSLRTQI 842
Query: 196 SIYKRQLAEQEGMSQQSVTRSDDSSVN 276
S + Q ++ + D S++
Sbjct: 843 STLASDVGNQRA-KVDAIQKDHDQSLS 868
>At3g11490.1 68416.m01401 rac GTPase activating protein, putative
similar to rac GTPase activating protein 1 GB:AAC62624
GI:3695059 [Lotus japonicus]; contains Pfam profile
PF00620: RhoGAP domain
Length = 435
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +1
Query: 4 ISKLEARIKDMELELDEEKRRHAETIKILRKKERQL 111
+ EA +KD E DEE+ AE+++++ K+ L
Sbjct: 358 LDNFEAEMKDKEESADEEEEECAESVELVDIKKSSL 393
>At2g23070.1 68415.m02750 casein kinase II alpha chain, putative
similar to casein kinase II, alpha chain (CK II) [Zea
mays] SWISS-PROT:P28523; contains protein kinase domain,
Pfam:PF00069
Length = 432
Score = 27.5 bits (58), Expect = 9.9
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = +1
Query: 151 ISLLQDSLEKTSQKVSIYKRQLAEQEGMSQQ 243
+S LQD+L + + S+Y++ L Q+ QQ
Sbjct: 42 LSSLQDNLRRFASSASLYRQHLRNQQQQHQQ 72
>At1g22260.1 68414.m02782 expressed protein
Length = 857
Score = 27.5 bits (58), Expect = 9.9
Identities = 19/71 (26%), Positives = 36/71 (50%)
Frame = +1
Query: 13 LEARIKDMELELDEEKRRHAETIKILRKKERQLKEVIIQCEEDQKNISLLQDSLEKTSQK 192
LE++ ++ L E +R+ + I +R+K K II E+D K +++D K ++
Sbjct: 541 LESKQLELSRHLKELSQRNDQAINEIRRKYDVEKHEIINSEKD-KVEKIIKDLSNKFDKE 599
Query: 193 VSIYKRQLAEQ 225
+S K + Q
Sbjct: 600 LSDCKEESKRQ 610
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,694,893
Number of Sequences: 28952
Number of extensions: 249134
Number of successful extensions: 1080
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 994
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1076
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1633819784
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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